Details from NCBI annotation

Gene Symbol Cpne6
Gene Name copine VI (neuronal), transcript variant X3
Entrez Gene ID 101706959

Database interlinks

Part of NW_004624820.1 (Scaffold)

For more information consult the page for NW_004624820.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CPNE6 ENSCPOG00000003506 (Guinea pig)

Gene Details

copine VI (neuronal)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003169, Guinea pig)

Protein Percentage 98.38%
CDS Percentage 93.72%
Ka/Ks Ratio 0.02231 (Ka = 0.0071, Ks = 0.3162)

CPNE6 ENSG00000100884 (Human)

Gene Details

copine VI (neuronal)

External Links

Gene Match (Ensembl Protein ID: ENSP00000380211, Human)

Protein Percentage 97.67%
CDS Percentage 91.92%
Ka/Ks Ratio 0.02634 (Ka = 0.0118, Ks = 0.4481)

Cpne6 ENSMUSG00000022212 (Mouse)

Gene Details

copine VI

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000073847, Mouse)

Protein Percentage 96.77%
CDS Percentage 88.51%
Ka/Ks Ratio 0.01998 (Ka = 0.0143, Ks = 0.7169)

Cpne6 ENSRNOG00000018399 (Rat)

Gene Details

copine VI (neuronal) (Cpne6), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000024978, Rat)

Protein Percentage 96.77%
CDS Percentage 88.39%
Ka/Ks Ratio 0.02093 (Ka = 0.0152, Ks = 0.7244)

Genome Location

Sequence Coding sequence

Length: 1674 bp    Location: 8458889..8451588   Strand: -
>XM_004864143.1
ATGTCTGACCCTGAGATGGGATGGGTGCCTGAGCCCCCAACCATGACGTTGGGGGCCTCCCGGGTGGAGCTACGAGTATCCTGCCATGGCCTCTTGGACCGAGACACTCTGGCCAAGCCCCACCCCTGTGTGCTGCTCAAGCTGTACTCTGACGAGCAATGGGTAGAGGTGGAGCGCACGGAGGTGCTTCGCTCCTGTTCCAGCCCTGTCTTCTCCCGGGCACTGGCCCTCGAGTACTTTTTTGAAGAGAAGCAGCCCTTGCAATTCCACGTGTTTGATGCTGAGGACGGAGCCACCAGCCCCAGCAATGATACCTTCCTTGGCTCGACAGAGTGCACCTTGGGCCAGATTGTGTCACAAACCAAGGTCACGAAGCCATTACTGCTGAAGAATGGGAAAACAGCCGGCAAGTCCACAATCACAATTGTGGCTGAGGAGGTATCTGGTACCAATGACTACGTGCAACTTACCTTCAGAGCCCAAAAGCTGGACAACAAGGATCTGTTCAGCAAGTCTGACCCTTTTATGGAAATCTATAAGACCAACAGGGACCAGAGTGACCAGCTGGTCTGGAGGACTGAGGTGGTGAAAAACAACCTGAACCCCAGCTGGGAGCCATTCCGCCTGTCCCTGCACTCTCTATGCAGCTGTGATGTCCACCGGCCTCTCAAGTTTCTGGTGTATGACTATGACTCCAGTGGGAAGCATGACTTCATCGGCGAGTTCACCAGCACCTTCCAGGAGATGCAGGAGGGGACAGCAAAACCTGGGCAGGAGATGCAATGGGACTGTATCAACCCCAAGTATCGGGACAAGAAGAAGCATTACAAGAGCTCAGGGACAGTAGTGCTGGCCCAGTGCACGGTGGAGAAGGTGCACACCTTCCTGGATTACATCATGGGTGGCTGCCAGATCAGCTTCACGGTGGCCATCGACTTCACCGCCTCCAATGGGGACCCGAGGAGCAGCCAGTCCCTACACTGCCTCAGCCCCCGGCAGCCAAACCACTACCTGCAGGCCCTTCGGGCAGTGGGAGGCATCTGCCAGGACTATGACAGTGATAAGAGGTTCCCCGCTTTTGGCTTTGGGGCTCGGATCCCCCCCAACTTCGAGGTGTCACACGACTTTGCTATCAACTTTGACCCGGAAAACCCTGAATGTGAGGAAATCACGGGGGTCATCACCTCCTACCGCCGGTGCTTGCCCCAGATCCAGCTCTATGGCCCCACCAACGTGGCCCCCATTATCAACCGTGTGGCTGGGCCGGCACAGCGGGAGCAGAGCACTGGACAAGCCACGAAGTACTCGGTGCTGCTGGTGCTCACCGATGGCGTGGTGAGCGACATGGCCGAGACCCGCACCGCGATCGTGCGTGCCTCCCGCCTACCCATGTCCATCATCATCGTGGGTGTGGGCAATGCTGACTTCTCTGACATGCGACTGCTGGACGGCGACGATGGTCCCTTGCGCTGCCCCCAAGGGGTGACTGCGGCCCGCGACATCGTCCAGTTCGTGCCCTTCCGGGACTTTAAGGATGCTGCCCCGTCGGCACTAGCTAAGTGCGTCCTGGCTGAGGTTCCCCGGCAGGTGGTGGAGTATTATGCCAGCCAGGGCATCAGCCCAGGGGCTCCCAGGCCCTGCACGCCAGCCACAACTCCGAGCCCTAGCCCGTGA

Related Sequences

XP_004864200.1 Protein

Cpne6 PREDICTED: copine-6 isoform X3 [Heterocephalus glaber]

Length: 557 aa      View alignments
>XP_004864200.1
MSDPEMGWVPEPPTMTLGASRVELRVSCHGLLDRDTLAKPHPCVLLKLYSDEQWVEVERTEVLRSCSSPVFSRALALEYFFEEKQPLQFHVFDAEDGATSPSNDTFLGSTECTLGQIVSQTKVTKPLLLKNGKTAGKSTITIVAEEVSGTNDYVQLTFRAQKLDNKDLFSKSDPFMEIYKTNRDQSDQLVWRTEVVKNNLNPSWEPFRLSLHSLCSCDVHRPLKFLVYDYDSSGKHDFIGEFTSTFQEMQEGTAKPGQEMQWDCINPKYRDKKKHYKSSGTVVLAQCTVEKVHTFLDYIMGGCQISFTVAIDFTASNGDPRSSQSLHCLSPRQPNHYLQALRAVGGICQDYDSDKRFPAFGFGARIPPNFEVSHDFAINFDPENPECEEITGVITSYRRCLPQIQLYGPTNVAPIINRVAGPAQREQSTGQATKYSVLLVLTDGVVSDMAETRTAIVRASRLPMSIIIVGVGNADFSDMRLLDGDDGPLRCPQGVTAARDIVQFVPFRDFKDAAPSALAKCVLAEVPRQVVEYYASQGISPGAPRPCTPATTPSPSP