Sequence details NCBI ID: XM_004864138.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Nrl
Gene Name neural retina leucine zipper, transcript variant X3
Entrez Gene ID 101705497

Database interlinks

Part of NW_004624820.1 (Scaffold)

For more information consult the page for NW_004624820.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

NRL ENSCPOG00000003509 (Guinea pig)

Gene Details

Cavia porcellus neural retina leucine zipper gene (Nrl), mRNA.

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003172, Guinea pig)

Protein Percentage 93.25%
CDS Percentage 91.14%
Ka/Ks Ratio 0.09707 (Ka = 0.0315, Ks = 0.3248)

NRL ENSG00000129535 (Human)

Gene Details

neural retina leucine zipper

External Links

Gene Match (Ensembl Protein ID: ENSP00000454062, Human)

Protein Percentage 91.56%
CDS Percentage 90.3%
Ka/Ks Ratio 0.10402 (Ka = 0.0389, Ks = 0.3743)

Nrl ENSMUSG00000040632 (Mouse)

Gene Details

neural retina leucine zipper gene

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000107035, Mouse)

Protein Percentage 88.19%
CDS Percentage 84.39%
Ka/Ks Ratio 0.08878 (Ka = 0.0656, Ks = 0.7391)

Nrl ENSRNOG00000018528 (Rat)

Gene Details

neural retina leucine zipper (Nrl), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000024991, Rat)

Protein Percentage 88.61%
CDS Percentage 84.39%
Ka/Ks Ratio 0.08626 (Ka = 0.0637, Ks = 0.7387)

Genome Location

Sequence Coding sequence

Length: 714 bp    Location: 8436471..8449354   Strand: +
Raw sequence   
>XM_004864138.1
ATGGCACTGGCGCCCAGCCCTCTGGCCATGGAATATGTTAATGACTTTGACTTGATGAAGTTTGAGGTAAAGCGGGAGCCTTCTGAGGGGCGATCTGGCCCCCCTACAGCCTCACTGGGCTCCACACCTTACAGCTCAGTGCCTCCTTCACCCACCTTCAGTGAGCCGGGCATAGTGGGGTCTGCCGAGGGCTCACGGGCAGGCGTGGAGGAGCTGTACTGGCTGGCCACGCTGCACCAGCAGCTAGGGGCTGGGGAGTCGCTGGGGCTGAGTCCTGCTGAGGCTGTGGAGCTGCTGCAAGGTCAGGGTTCAGTCCCCGTTGAGGGACCCCTCGGCTATTACCCAGGGAACTCAGAGGAGACAGAAGCCCAGCATGTCCAGCTGGCCGAGAGGTTTTCAGACGCGGCGCTGGTATCGATGTCTGTGAGGGAGCTCAACCGGCAGCTGAGGGGCTGCGGGCGAGACGAGGCCCTGCGGCTGAAGCAGAGGCGCCGCACACTGAAGAACCGCGGTTACGCGCAGGCCTGTCGCTCCAAGCGGCTGCAGCAGCGACGTGGGCTGGAGGCCGAGCGCGCCCGCCTGGCTGCCCAGTTGGATGCGCTTCGGGCCGAGGTGGCTCGCCTGGCACGCGAGCGCGACCTCTACAAGGCTCGCTGTGACCGCCTGACCTCGAGCGGCCCGGGGTCCGGGGACCACACCCACCTCTTCCTCTGA

Related Sequences

XP_004864195.1 Protein

Nrl PREDICTED: neural retina-specific leucine zipper protein isoform X3 [Heterocephalus glaber]

Length: 237 aa      View alignments
>XP_004864195.1
MALAPSPLAMEYVNDFDLMKFEVKREPSEGRSGPPTASLGSTPYSSVPPSPTFSEPGIVGSAEGSRAGVEELYWLATLHQQLGAGESLGLSPAEAVELLQGQGSVPVEGPLGYYPGNSEETEAQHVQLAERFSDAALVSMSVRELNRQLRGCGRDEALRLKQRRRTLKNRGYAQACRSKRLQQRRGLEAERARLAAQLDALRAEVARLARERDLYKARCDRLTSSGPGSGDHTHLFL