Sequence details NCBI ID: XM_004864094.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Tgm1
Gene Name transglutaminase 1, transcript variant X2
Entrez Gene ID 101723323

Database interlinks

Part of NW_004624820.1 (Scaffold)

For more information consult the page for NW_004624820.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TGM1 ENSCPOG00000014400 (Guinea pig)

Gene Details

transglutaminase 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012971, Guinea pig)

Protein Percentage 95.89%
CDS Percentage 92.73%
Ka/Ks Ratio 0.09114 (Ka = 0.0238, Ks = 0.2606)

TGM1 ENSG00000092295 (Human)

Gene Details

transglutaminase 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000206765, Human)

Protein Percentage 90.57%
CDS Percentage 88.59%
Ka/Ks Ratio 0.11768 (Ka = 0.0509, Ks = 0.4325)

Tgm1 ENSMUSG00000022218 (Mouse)

Gene Details

transglutaminase 1, K polypeptide

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000128090, Mouse)

Protein Percentage 90.48%
CDS Percentage 87.02%
Ka/Ks Ratio 0.10256 (Ka = 0.0525, Ks = 0.5119)

Tgm1 ENSRNOG00000020136 (Rat)

Gene Details

transglutaminase 1 (Tgm1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000027315, Rat)

Protein Percentage 90.72%
CDS Percentage 87.09%
Ka/Ks Ratio 0.0965 (Ka = 0.0502, Ks = 0.5202)

Genome Location

Sequence Coding sequence

Length: 2436 bp    Location: 8239122..8252710   Strand: +
Raw sequence   
>XM_004864094.1
ATGATGGACAGTTCTCGCTCAGACATGGGCCGCTGGGGCGGGAACCCCTTGCAGCCCCCTGCCACACCTTCTCCAGAGCCAGACCGAGTCTGGGACCGAAACCGAGACCGAGACCGACGCCGAGGAGGAGGAGCCCGTTCCTTCTGGGCTCGCTGCTGTGGCTGCTGCTCTTGCCGGAATAGGGAAGATGACGACTGGGGGCCTGAGCCTTCTGGCTCCAGAAATCGAGGGTCCAGCTCTTGGAATCGAAGACCTGAATCCCGGGGCAGTGGTGTGAATGCGGCAGGAGATGGCACCGTCCGAGAGGGCATGCTGGTGGTGACCCGTGTGGATTTGCTGGGCTCCCGCTCAGACCAGAACCGTCGAGATCACCACACCGATGAGTTTGAGTACGATGAGCTGATTGTGCGCCGTGGGCAACCTTTCTACCTGGTCCTCTTCCTGAACCGGCCCTATGAGTCCTCTGACCGTATGGCCCTTGAGCTGCTCATTGGAAACAACCCTGAGGTGGGCAAGGGCACCCACGTGATCATCCCAGTGGACAAGGGGAGCAGTGGGGGCTGGAAGGCCCATGTGACCAAGGCCAGCGGGCAGAATCTGAATCTGCGGGTCCACACCTCCCCCAGTGCCATCATCGGCAAGTTTCAGTTCACGGTCCGCACACGCTGTGAGGCTGGAGAGTTCCAGCTGCCCTTGGACCCCCGCAATGAGATCTACATCCTTTTTAACCCCTGGTGCCCAGAGGACATCGTGTATGTGGATCATGAGGACTGGCGGCAGGAATATGTACTTAATGAGTCTGGGAGAATTTACTATGGAACTGAAGCACAGATTGGTGAGCGGACCTGGAACTATGGCCAGTTTGACCACGGGGTGCTGGATGCCTGCCTGTATATCCTAGACCGGCGGGGGATGCCATACGGAGGTCGTGGGGACCCAGTCAGTGTCTCCCGCGTCATCTCTGCTATGGTGAACTCCCTGGATGACAATGGAGTCCTGATTGGGAACTGGTCTGGCGATTACTCCAGAGGCACCAACCCTTCAGCGTGGGTGGGCAGCGTGGAGATCCTGCTTAGCTACCTACGCACAGGCTATTCTGTCCCCTATGGCCAGTGTTGGGTCTTTGCTGGTGTGACCACCACAGTGTTGCGATGCCTGGGCCTAGCCACACGTACTGTCACCAACTTCAACTCTGCCCACGACACTGACACATCCCTCACTATGGACATCTACTTTGATGAGAACATGAAGCCACTTGAGCATCTGAACCACGATTCTGTTTGGAATTTCCATGTGTGGAACGACTGCTGGATGAAGAGGCCGGATCTGCCTTCGGGCTTTGATGGGTGGCAGGTTGTAGACGCCACACCCCAGGAGACTAGCAGTGGCATCTTCTGCTGTGGTCCCTGCTCTGTGGAGTCCATCAAGAATGGCTTAGTCTACATGAAATATGACACACCCTTCATTTTTGCCGAGGTGAATAGTGACAAAGTATACTGGCAGCGGCAGGAAGATGGCAGCTTCAAGATTGTGTATGTAGAGGAAAAGGCTATTGGCACCCTCATTGTCACAAAAGCTATCAGCTCCAACATGCGGGAGGACATCACCCACACGTATAAGCATCCAGAAGGCTCAGAAGCAGAGCGGAAGGCAGTGGAGACAGCAGCTGCCCATGGCAGCAAGCCCAATGTGTATGCCAGCCGAGACTCTACTGAGGACGTGGCCATGCAGGTGGAAGCTCAGGACGCAGTGATGGGCCAGGATCTGACAGTCTCTGTGGTGCTGACAAATCGTGGCAGTAATCACCGCACTGTGAAGCTGCACCTCTACCTCTCTGTCACCTACTACACTGGTGTCACTGGGTCCATCTTCAAAGAGAGCAAGAAGGAAGTGGCACTGGCACCAGGAGCCTCGGACCGTATGACTATGCCCGTGGCCTACAAGGAATACCAGCCCCACCTCGTGGACCAGGGGGCCATGCTTCTCAATGTCTCTGGCCATGTCAAGGAGAGCGGGCAGGTGCTGGCCAAGCAGCACACCTTCCGTGTGCGCACCCCAGACCTCTCCCTCACGTTACTGGGAGCAGCCGTGGTTGGCCAGGAGTGCGAAGTACAGATTATCTTCAAGAACCCCCTGCCCATTACCCTGACCAAAGTTGTCTTCCGGCTCGAGGGCTCCGGGTTACAGAGACCCAAAGTCCTCAATGTTGGGGACATCGGGGGCAATGAGACAGTGACCCTGCGCCAGACATTTGTGCCTGTGAGACCAGGCCCACGCCAGCTCATTGCCAGCTTGGACAGCCCACAGCTCTCCCAGGTGCACGGTGTCATCCAGGTGGATGTGGCCCCAGCCTCTGGGGGCGGGGCTTTCTCAGAAGCTGGAGGTGACAGTCGCTCTGGGGAGTCCATCCCTATGGCATCTCGAGGTGGAGCTTAG

Related Sequences

XP_004864151.1 Protein

Tgm1 PREDICTED: protein-glutamine gamma-glutamyltransferase K isoform X2 [Heterocephalus glaber]

Length: 811 aa      View alignments
>XP_004864151.1
MMDSSRSDMGRWGGNPLQPPATPSPEPDRVWDRNRDRDRRRGGGARSFWARCCGCCSCRNREDDDWGPEPSGSRNRGSSSWNRRPESRGSGVNAAGDGTVREGMLVVTRVDLLGSRSDQNRRDHHTDEFEYDELIVRRGQPFYLVLFLNRPYESSDRMALELLIGNNPEVGKGTHVIIPVDKGSSGGWKAHVTKASGQNLNLRVHTSPSAIIGKFQFTVRTRCEAGEFQLPLDPRNEIYILFNPWCPEDIVYVDHEDWRQEYVLNESGRIYYGTEAQIGERTWNYGQFDHGVLDACLYILDRRGMPYGGRGDPVSVSRVISAMVNSLDDNGVLIGNWSGDYSRGTNPSAWVGSVEILLSYLRTGYSVPYGQCWVFAGVTTTVLRCLGLATRTVTNFNSAHDTDTSLTMDIYFDENMKPLEHLNHDSVWNFHVWNDCWMKRPDLPSGFDGWQVVDATPQETSSGIFCCGPCSVESIKNGLVYMKYDTPFIFAEVNSDKVYWQRQEDGSFKIVYVEEKAIGTLIVTKAISSNMREDITHTYKHPEGSEAERKAVETAAAHGSKPNVYASRDSTEDVAMQVEAQDAVMGQDLTVSVVLTNRGSNHRTVKLHLYLSVTYYTGVTGSIFKESKKEVALAPGASDRMTMPVAYKEYQPHLVDQGAMLLNVSGHVKESGQVLAKQHTFRVRTPDLSLTLLGAAVVGQECEVQIIFKNPLPITLTKVVFRLEGSGLQRPKVLNVGDIGGNETVTLRQTFVPVRPGPRQLIASLDSPQLSQVHGVIQVDVAPASGGGAFSEAGGDSRSGESIPMASRGGA