Details from NCBI annotation

Gene Symbol Rabggta
Gene Name Rab geranylgeranyltransferase, alpha subunit, transcript variant X3
Entrez Gene ID 101722509

Database interlinks

Part of NW_004624820.1 (Scaffold)

For more information consult the page for NW_004624820.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RABGGTA ENSCPOG00000014401 (Guinea pig)

Gene Details

Rab geranylgeranyltransferase, alpha subunit

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012972, Guinea pig)

Protein Percentage 95.05%
CDS Percentage 91.93%
Ka/Ks Ratio 0.11084 (Ka = 0.0285, Ks = 0.2567)

RABGGTA ENSG00000100949 (Human)

Gene Details

Rab geranylgeranyltransferase, alpha subunit

External Links

Gene Match (Ensembl Protein ID: ENSP00000382341, Human)

Protein Percentage 93.47%
CDS Percentage 90.83%
Ka/Ks Ratio 0.09735 (Ka = 0.0329, Ks = 0.3384)

Rabggta ENSMUSG00000040472 (Mouse)

Gene Details

Rab geranylgeranyl transferase, a subunit

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000133032, Mouse)

Protein Percentage 89.07%
CDS Percentage 86.13%
Ka/Ks Ratio 0.11131 (Ka = 0.0599, Ks = 0.5377)

Rabggta ENSRNOG00000030483 (Rat)

Gene Details

Rab geranylgeranyltransferase, alpha subunit (Rabggta), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000049261, Rat)

Protein Percentage 89.07%
CDS Percentage 86.48%
Ka/Ks Ratio 0.1218 (Ka = 0.06, Ks = 0.493)

Genome Location

Sequence Coding sequence

Length: 1704 bp    Location: 8230908..8236845   Strand: +
>XM_004864092.1
ATGCACGGGCGCCTGAAGGTGAAGACGTCAGAAGAGCAGGCAGAGGCCAAAAGGTTAGAGCGGGAGCAGAAGCTGAAGCTCTACCAGTCAGCCACCCAAGCCATCTTCCAGAAGCGCCAAGCTGGTGAGCTGGATGAGTCAGTGTTGGAACTAACAAGCCAGATTTTGGGAGCCAACCCTGATTTTGCCACCCTCTGGAACTGCCGGCGAGAGGTGCTCCAGCAACTGGAGGCCCAGAAGTCTCCCGAGGAGTTGGCTGCTCTGGTAAAGGCAGAACTGGTCTTCCTCGAGAGCTGCCTGCGTGTGAACCCTAAGTCCTATGGGACCTGGCACCACCGCTGCTGGCTGCTAGGCCGCCTGCCTGAGCCCAATTGGGCCCGAGAGCTGGAGCTATGTGCTCGCTTCCTTGAGGTGGATGAGCGGAACTTTCATTGCTGGGACTATCGGCGGTTTGTGGCTGCACAGGCAGCTGTGCCTCCTGCAGAGGAGCTAGCCTTCACTGACAGTCTCATCACCCGAAACTTTTCCAACTATTCTTCCTGGCATTACCGATCCTGCCTCTTGCCCCAGCTGCACCCCCAGCCAGACTCAAGCCCACAGGGGCGCCTCCCTGAAGATGTGCTGCTCAAAGAGCTGGAGTTGGTGCAGAATGCCTTCTTCACTGACCCCAATGATCAGAGCGCCTGGTTCTATCACCGCTGGCTCCTGGGCCGAGCTGACCCCCAGGATGCTCTGCGGTGCCTGCACGTGAGCCGGGATGAGGCCTGTGTGACTATCTCCTTCTCTCGGCCCCTGCTAGTGGGCTCCGGGACAGAGACCTTGCTGCTCGTGGCTGATCAGTCACCCCTGATTGTGGAGTGGAGGACCCCAGATGGAAGGAACCGGCCCAGCCATGTCTGGCTTTGTGACCTGCCTGCCGCCTCCCTCAGCGACCAGTTGCCCCAACATACATTTCGTGTCATTTGGACAGCAGGGGATGCCCAGAAGGAGTGTGTGCTTTTAAAAGGCCGGCGGGAGGCCTGGTGCCGAGACTCAGCCACGGATGAGCAGCTGTTCAGGTGTGAGCTGTCAGTGGAAAAGTCCACGGTGCTGCAGTCTGAGCTCAAGTCCTGTAAGGAGCTGCAGGAGTTGGAGCCTGAGAATAAATGGTGCCTGCTCACCATCATCCTGCTGATGCGGGCACTGGACCCACTCCTGTATGAGAAGGAGACGTTGCAGTACTTCCAGACCCTCAAGGCTGTGGACCCCATGCGAGCTGCCTACCTGGATGACCTGCGCAGCAAGTTCTTGCTGGAGAACAGCGTACTCAAGATGGAGTATGCGGAGGTGCGCGTGCTTCACCTGGCTCACAAGGATCTGACAGTGCTCTGCCATCTGGAACAGCTGCTCTTGGTCACCCATCTTGATCTGTCACACAATCGTCTCCGAACCCTGCCCCCTGCTCTTGCCGCTCTGCGCTGCCTTCAGGTGCTGCAGGCCAGTGACAATTCCATAGAGTCCCTGGACGGTGTCGCTAACCTGCCCCAGCTGCAGGAGCTGTCACTGTGCAACAACCGCCTTCAGCAGCCTGCAGCGCTCCAGTCTCTTGCCTCCTGCCCCAGGCTGGCTCTCCTCGACCTTCAAGGCAATCCACTGTGCCAGGAAGGGGGCATCTTGGATCACCTGGCCAAACTGTTGCCTTCAGTTCGTAGCATCCTCACCTAA

Related Sequences

XP_004864149.1 Protein

Rabggta PREDICTED: geranylgeranyl transferase type-2 subunit alpha isoform X3 [Heterocephalus glaber]

Length: 567 aa      View alignments
>XP_004864149.1
MHGRLKVKTSEEQAEAKRLEREQKLKLYQSATQAIFQKRQAGELDESVLELTSQILGANPDFATLWNCRREVLQQLEAQKSPEELAALVKAELVFLESCLRVNPKSYGTWHHRCWLLGRLPEPNWARELELCARFLEVDERNFHCWDYRRFVAAQAAVPPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSSPQGRLPEDVLLKELELVQNAFFTDPNDQSAWFYHRWLLGRADPQDALRCLHVSRDEACVTISFSRPLLVGSGTETLLLVADQSPLIVEWRTPDGRNRPSHVWLCDLPAASLSDQLPQHTFRVIWTAGDAQKECVLLKGRREAWCRDSATDEQLFRCELSVEKSTVLQSELKSCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFQTLKAVDPMRAAYLDDLRSKFLLENSVLKMEYAEVRVLHLAHKDLTVLCHLEQLLLVTHLDLSHNRLRTLPPALAALRCLQVLQASDNSIESLDGVANLPQLQELSLCNNRLQQPAALQSLASCPRLALLDLQGNPLCQEGGILDHLAKLLPSVRSILT