Sequence details NCBI ID: XM_004864075.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Nynrin
Gene Name NYN domain and retroviral integrase containing, transcript variant X2
Entrez Gene ID 101717507

Database interlinks

Part of NW_004624820.1 (Scaffold)

For more information consult the page for NW_004624820.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

NYNRIN ENSCPOG00000014420 (Guinea pig)

Gene Details

NYN domain and retroviral integrase containing

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012988, Guinea pig)

Protein Percentage 90.61%
CDS Percentage 91.3%
Ka/Ks Ratio 0.22562 (Ka = 0.0506, Ks = 0.2243)

NYNRIN ENSG00000205978 (Human)

Gene Details

NYN domain and retroviral integrase containing

External Links

Gene Match (Ensembl Protein ID: ENSP00000371994, Human)

Protein Percentage 86.61%
CDS Percentage 87.8%
Ka/Ks Ratio 0.21954 (Ka = 0.075, Ks = 0.3414)

Nynrin ENSMUSG00000075592 (Mouse)

Gene Details

NYN domain and retroviral integrase containing

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000129557, Mouse)

Protein Percentage 77.92%
CDS Percentage 81.11%
Ka/Ks Ratio 0.23599 (Ka = 0.1335, Ks = 0.5657)

Nynrin ENSRNOG00000048431 (Rat)

Gene Details

NYN domain and retroviral integrase containing

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000066468, Rat)

Protein Percentage 76.68%
CDS Percentage 79.95%
Ka/Ks Ratio 0.22049 (Ka = 0.1407, Ks = 0.638)

Genome Location

Sequence Coding sequence

Length: 5694 bp    Location: 8114273..8093119   Strand: -
Raw sequence   
>XM_004864075.1
ATGCTCTTGTCCGGGGGTGAACCCCCGGCGCTGGAATGGTTCATGGTGCAGACAAAATCGAAGCCTCGGGTGCAGCGGCAGCGGCTACAAGTGCAACGCATCTTCAGGGTCAAGCTGAACGCCTTCCAGAGCCGTCCCGACACCCCCTACTTCTGGCTGCAGCTCGAGGGGCCCCGGGAGAACACGAGCAAAGCTAAGGAGTATCTGAAGGGCCTGTGCAGCCCAGAGCTGTGGAAGGAGGTCCGCTACCCGCCGATGCTGCACTGTGCCTTCCTTGGCGCCCAGGGCCTCTTTTTGGATTGCCTCTGCTGGAGTACCCTGGCCTATCTGGTGCCTGGCCCTCCTGGCTCCCTGATGGTAGGCGGGCTCACCGAGTCTTTCACCATGACCCAGAACTGGCTGGAGGAGTTGGTGGCACGCCTGCGCTGGGGCCCTGCCCCTCTGCTGACCCCCCGGGGGATCTGGGAGGCTGAGGTGACCCGGGCCTTTGGGGCCCTGGTGTGGATCCGTGGTGACCAGTATGCAGGGGATCTGCTGCAGCTGCCCCCAGCTGTTCAGGAGCTGCTGCTGAGCTTGGTGCGCGATGCGGCAGGCAAGGAGGACATCATTGAGTGGCTCAGCCACTTCGGCATCTCCAACACCTGCTCACCAGTGGCCCTGAGAAGCCCTCCCCAGCAGCAAAAGGAAGACTCAGCCATGGTGTCCACGGGAGAGAGTCCTGGGTCCTTCCTTGAGATGGGGACCCTCCAGAATGGGGGCCCAGAAAATCCAAAGAGATTAAGCAGCCTGGGAGCCACCAGGTCCCTGATCCCAGCCCAGAGCACACAGCAGGAGACAGCAAACCAGGTGGTTCGGGTCGGTTCCAACAATCAAAGTGGTACGGACAGTGATCGAGAGGAAGGGCTGGTACGAGCAACCAGCAGCCAGGACTCTGTGAACCACACACCAGCCTTGCTGCAACAAAAGCAGGTCCAGAAGGTAGAAGAGAAATTCCCCTTCCAGCCTCCGGTGTCAGCCCTGGGTGTGTATCCATCCTGGAAGGCCTGGGCCCCAGGGCCAGCCTTTGGGCCCTTGTGGCCAGGGACTATTGCTGCAGCCTTCTGGAGGATCAATCAACTGCATTCTCTGCACCTGGCCTGGCTCCTGTCCCAGGCATGCTTTAGTCTCCCATTCTGGCAGAGGCCGCTGGGCCCCATTCAGCTAAAGCTGCCAGGGCAGAGTGCTTTGCCCTTAAATCTAGAGTGGAAGCAGAAGGAGCTGGCTCCTTTGCCTAGTGCAGAAAGCCCAGCTTGTAGGCCAGATGGGGAACTGGTCTACAAATCTACAGAGACAACTCTACAGAATTGCCCAAGGCCAGAGACACCCCCAAAAGTCATGAGTTTATTGGTGGTCCCAGGAGGCTCAGGTGAAAAGGACAAAGTTAGCCCAAGACTTCCACTTTTGGCCTCTACCACACAACTACAAGCTGGAGGTGAGCGCAGGAACCAAGGAAGTCTGCAGCCAGATTGTATGTGGCTGGAAAAGGGGCCCTATCCAGCATCACCCACAGAACAGGGGGTGCTCACAGCTCAAGGAAGGCCCATGGCTCAAGGTGGGCTGACAGCCCAGTCAGCACCTGAAGCTGGAACAGTGCCTGAAACTCTCAAAGTGCCCGTGGCTGCAGTAGTGCCCAAAGCTGAAAACCCACCCCTAACTCAAGGGCAGCCTGCAGCTCCCAAAGTGCCTACATCCCAAATGATGCCGGCAGTGAGCACAGAGCCTGCAGCTCCCAAAGTGCCTTTGGCTCCAACAATGCCTACTGCTCAAGTGGTGTCCACAGCTCAAAAAGCTGCTGTGGATCAACCAGCATTGGCATCAGCAGCTCAAGTGATGTCTACAACTCCAAAAACTGCCATGGCACAGAAGATGCTGGCAACCAAAACATCACCTGCAAGTCCCAAAACACTCAAAGCTCAAACTGGGCCCGTGACTAAAATGGAGTCTGCAGCTCCCAAAGCATCAGCAGCTCCTAAAACATCTGCAGCTCCCAAAGCACCTGCAGCTTCTAAAGCCTCCAGAGCTCCCCAAACACCTGCAGTCCAGAAAGTGCCCACAGGTACAGGGCCGACCTTGGATGTAGCCAGACTTTTGAGTGAAGTCCAACCTTCATCAAAGGGTGATGCCTCCTTACCAAAGGGCCAGGTGGAACCTGGAAGGCAGGGTGTCCAGTCCAGCAGTAAGCACCAGCTCTTGGGGGGTTGGGAGGGGGGCCCGAGGCAGTCACCTCGCCACCCACAGGTGAACAGCACAGTGACCAGCTTCCAGAGGTACCATGAGGCCCTGAACACACCCTTTGAGCTGAACTTATCAGGAGAACCTGGGAACCAGGAATTGCGCAGAGTGGTCATTGACGGCAGCAGCGTGGCCATGGTGCATGGCCTCCAGCATTTCTTCTCCTGCCGAGGCATTGCCATGGCAGTGCAGTATTTCTGGAACCGGGGACACCGAGAGGTCACTGTGTTTGTACCCACCTGGCAGCTGAAGAAGAACCGAAGGGTGAGAGAAAGCCACTTTCTGACGAAGCTTCACTCGCTCAAGATGCTTTCAATCACCCCCTCCCAGCTGGAGAACGGCAAGAAGATCGCCACCTATGACTATAGGTTCATGGTAAAGCTGGCAGAAGAGACAGATGGCGTCATTGTTACCAATGAGCAGATTCACACCCTGATGAATAATTCTAAGAAACTCATGGTCAAAGATCGCCTGCTGCCCTTCACCTTTGCGGGGAATCTCTTCATGGTGCCAGATGACCCCCTGGGCCGTGATGGCCCCACCTTGGATGAGTTTCTGAAGAAGCCAAACAGGTTGGACACAGACATTGGCAACTTCTTGAAGGTGTGGAAGACCCTTCCACCCAGCTCAGCCAGCATCTCTCAACTCAGGGATGACACTGATCCTAGGCCCTTGGAGGGTCCACAGAATGTGGAAGAAGTCAGAGAGGAGAAGGAGGAGAGGCAAGATGAGGAGTGGAGAGAGGGGCAGGGAATGCCAGGGTGGGCTGAGGAGGATGACCTGGACTCTTTCCTGGCCTCAGTGTTCAGAGTTGAGTGCCCCTCCCTTTCAGAGGAAATTCTCCAATGCCTCAGCCTCCACGACCCCCCTGATGGAGCCCTGGACATTGACCTCCTTCCTGGGGTGGCCTCTTCGTACCTAGGGATCCCCTGGGATGGGAAGGCTCCCTGCCAGCAGGTTCTTGCCCAGCTGGCCCAGCTCACCACCCCCAGCAACTTCACCGTGCTGTCTTTCTTTGTGGGGTTCATGGACTCCCACCGGGATGTCATCCCTGACTACGAAGCCCTCATGGGCCCTTTGCACAGCCTCCTCAAGCAGAAGCCAGACTGGGTGTGGGACCAGGAGCATGAGAAGGCCTTCCTGGCCCTGAAGCGAGCCCTGGTGTCTGCCCTCTGTCTGTCAGCCCCCAATTGCCAGCTCCCCTTCCGCCTGCAGGTGACAGTGAGCCAGGTGGCCCTGACAGCCATCCTCTACCAGGAGCACTCAGGGAAGAAGCACCCCATCGCCTACACCTCGAAGCCCCTACTCCCGGATGAGGACAGTGAGGGCCCCCAGTCAGGCGGGGACAGCCCCTATGCCGTGGCCTGGGCCCTCAAGCATTTTTCCCACTGTATTGGAGATGACCCAGTGGTCCTCCACCTTGTCTACGCCTCCCGGACCACTGTGGCTCCTGAGGCACCAGAGTGCTGCCGGGTCTCCAAAGCATGGTTGATTCGATGGTCCCTTTTGGTACAGGACAGAGGCAAGAGGGCCCTGGAATTGGCCCTTCTCCAGGGCCTGCTGGGGGAAAACCGACTGTTGACACCTGTTTCCTCCATGCCTCGTTTCTTCCAGGTTCTGCCTCCTTTTTCTGACCTGTCCACTTTTGTCTGCATCCACATGTCGGGCTACTGCTTTTACCGCGAGGATGAGTGGTGTGCTGGTTTTGGCCTCTATGTCCTGTCTCCCACCAGTCCCCCGGTCTCCCTTTCCTTTTCCTGCTCCCCTTACACCCCGACCTATGCCCACCTGGCAGCCGTGGCCTGTGGCCTGGAGCGATGTGGCCAGTCCCACCTCCCTGTGGTTTTCCTCACCCACTGCAACTGGATCTTCAGCCTCCTCTGGGAGCTCCTGCCCCTCTGGAGGGCCCGGGGCTTCCTCTCCTCTGATGGGGCTGCACTACCTCACCCAAGCCTGCTCTCCTACATTATATCCCTCACCTCTGGCCTTTCATCTCTTCCATTCATCTACCGAACCTCCTACCGGAGCTCTCTGTTTGCTGTGACAGTGGATAACCTGGCCAAGCAGGGTGCCCAAGGAAGTGGGCAGTGGTGGGATTTGCCAAAGGATGTGCCGGTCCCTGTAGTGACTTCCCATACCATGGGCAAGAGGCCCAACTTGTTGGCATTGCAGCTGAGTGACAGCACTCTGGCTGATATCATTGCCAAACTTCGTGCTGGGCAGAAATTGTCTGTCTCCTCCCCCTTCAGTTCTGCCTTTCACTCACTCAGCCTTGACAAGGAGAGTGGGCTGCTTATGTTCAAGGGAGATAAAAAGCCCAAGGTCTGGGTAGTCCCAAGGCAGCTCCGGAGGGATCTGATTTTCTCTGTGCATGACATCCCCATGGGGGCCCACCAGCGGCCAGAGGAGACTTACAAAAAATTGCAGTTGCTGGGATGGTGGCCTGGGATGCAGGAGCATGTGAAAGATTACTGCAGGAGCTGCCTGTTTTGCATCCCCCGGAATCTCACAGGCAGTGAGTTGAAGGTCATCGAGTCCCCCTGGCCCCTCAGGTCGACTGCCCCTTGGTCGAACCTGCAGATCGAGGTGGTGGGGCCGCTCACCGTAAGCGAGGAGGGCCACAGGCATGTGCTCATCGTGGCTGACCCCAACACCCGGTGGGTGGAGGCGTTCCCGCTGAAACCCTACACACACATGGCGGTGGCCCAGGTGCTGCTTCAGCATGTGTTTGCACGGTGGGGCGTTCCTGTGAGGCTGGAGGCGGCCCAGGGCCCCCAGTTTGCTCGGCATGTCCTGGTGAGCTGTGGATTGGCCCTGGGAGCCCAGGTGACCTCCCTGAGTAGGGACTTGCAGTTCCCCTGCCTAGTGAGCTCAGAGGCCTACTGGGAATTCAAGAGGGCCCTAAAGGAGTTCATCTTCCTGCATGGCAGGAAGTGGGCAGCCTCTCTGCCCCTGTTGCACCTGGCCTTCAGAGCCTCTTCCACAGAGGCCACGCCATTCCAGGTCCTGACGGGGGCTGAGAGGAGGCTGACCGAGCCCCTGTGGTGGGAGATGAGCAGTGCAAACATTGAAGGGCTCAAGATGGATGTTTTCCTGCTGCAGCTGATTGGGGAGCTGCTGGAGCTCCACTGGAGGGGGGCTGAAAAAGGCACTGAGAAGGCTGACAACAGGCGCTTCAAGCAGGAGAGCCAGGAGAAGGAGTGGAACGTGGGTGACCAGGTCCTCCTGCTGTCTCTCCCCAGGAATGGCAGCAGTGCCAAATGGGTGGGTCCCTTCTATATTGGGGACCGGCTAAGCCTGTCCCTCTATAGGGTGTGGGGCTTCCCAACCCCAGAGAAGTTGGGGTGCATCTATCCCAGCAGTTTGATGAAGCCCTTTGCCAAGAGTGGCACACCCCTGTCCTTTAAGGTCTTGGAGCAATGA

Related Sequences

XP_004864132.1 Protein

Nynrin PREDICTED: protein NYNRIN isoform X2 [Heterocephalus glaber]

Length: 1897 aa      View alignments
>XP_004864132.1
MLLSGGEPPALEWFMVQTKSKPRVQRQRLQVQRIFRVKLNAFQSRPDTPYFWLQLEGPRENTSKAKEYLKGLCSPELWKEVRYPPMLHCAFLGAQGLFLDCLCWSTLAYLVPGPPGSLMVGGLTESFTMTQNWLEELVARLRWGPAPLLTPRGIWEAEVTRAFGALVWIRGDQYAGDLLQLPPAVQELLLSLVRDAAGKEDIIEWLSHFGISNTCSPVALRSPPQQQKEDSAMVSTGESPGSFLEMGTLQNGGPENPKRLSSLGATRSLIPAQSTQQETANQVVRVGSNNQSGTDSDREEGLVRATSSQDSVNHTPALLQQKQVQKVEEKFPFQPPVSALGVYPSWKAWAPGPAFGPLWPGTIAAAFWRINQLHSLHLAWLLSQACFSLPFWQRPLGPIQLKLPGQSALPLNLEWKQKELAPLPSAESPACRPDGELVYKSTETTLQNCPRPETPPKVMSLLVVPGGSGEKDKVSPRLPLLASTTQLQAGGERRNQGSLQPDCMWLEKGPYPASPTEQGVLTAQGRPMAQGGLTAQSAPEAGTVPETLKVPVAAVVPKAENPPLTQGQPAAPKVPTSQMMPAVSTEPAAPKVPLAPTMPTAQVVSTAQKAAVDQPALASAAQVMSTTPKTAMAQKMLATKTSPASPKTLKAQTGPVTKMESAAPKASAAPKTSAAPKAPAASKASRAPQTPAVQKVPTGTGPTLDVARLLSEVQPSSKGDASLPKGQVEPGRQGVQSSSKHQLLGGWEGGPRQSPRHPQVNSTVTSFQRYHEALNTPFELNLSGEPGNQELRRVVIDGSSVAMVHGLQHFFSCRGIAMAVQYFWNRGHREVTVFVPTWQLKKNRRVRESHFLTKLHSLKMLSITPSQLENGKKIATYDYRFMVKLAEETDGVIVTNEQIHTLMNNSKKLMVKDRLLPFTFAGNLFMVPDDPLGRDGPTLDEFLKKPNRLDTDIGNFLKVWKTLPPSSASISQLRDDTDPRPLEGPQNVEEVREEKEERQDEEWREGQGMPGWAEEDDLDSFLASVFRVECPSLSEEILQCLSLHDPPDGALDIDLLPGVASSYLGIPWDGKAPCQQVLAQLAQLTTPSNFTVLSFFVGFMDSHRDVIPDYEALMGPLHSLLKQKPDWVWDQEHEKAFLALKRALVSALCLSAPNCQLPFRLQVTVSQVALTAILYQEHSGKKHPIAYTSKPLLPDEDSEGPQSGGDSPYAVAWALKHFSHCIGDDPVVLHLVYASRTTVAPEAPECCRVSKAWLIRWSLLVQDRGKRALELALLQGLLGENRLLTPVSSMPRFFQVLPPFSDLSTFVCIHMSGYCFYREDEWCAGFGLYVLSPTSPPVSLSFSCSPYTPTYAHLAAVACGLERCGQSHLPVVFLTHCNWIFSLLWELLPLWRARGFLSSDGAALPHPSLLSYIISLTSGLSSLPFIYRTSYRSSLFAVTVDNLAKQGAQGSGQWWDLPKDVPVPVVTSHTMGKRPNLLALQLSDSTLADIIAKLRAGQKLSVSSPFSSAFHSLSLDKESGLLMFKGDKKPKVWVVPRQLRRDLIFSVHDIPMGAHQRPEETYKKLQLLGWWPGMQEHVKDYCRSCLFCIPRNLTGSELKVIESPWPLRSTAPWSNLQIEVVGPLTVSEEGHRHVLIVADPNTRWVEAFPLKPYTHMAVAQVLLQHVFARWGVPVRLEAAQGPQFARHVLVSCGLALGAQVTSLSRDLQFPCLVSSEAYWEFKRALKEFIFLHGRKWAASLPLLHLAFRASSTEATPFQVLTGAERRLTEPLWWEMSSANIEGLKMDVFLLQLIGELLELHWRGAEKGTEKADNRRFKQESQEKEWNVGDQVLLLSLPRNGSSAKWVGPFYIGDRLSLSLYRVWGFPTPEKLGCIYPSSLMKPFAKSGTPLSFKVLEQ