Details from NCBI annotation

Gene Symbol Sdr39u1
Gene Name short chain dehydrogenase/reductase family 39U, member 1
Entrez Gene ID 101715328

Database interlinks

Part of NW_004624820.1 (Scaffold)

For more information consult the page for NW_004624820.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SDR39U1 ENSCPOG00000011260 (Guinea pig)

Gene Details

short chain dehydrogenase/reductase family 39U, member 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010124, Guinea pig)

Protein Percentage 90.14%
CDS Percentage 91.84%
Ka/Ks Ratio 0.27664 (Ka = 0.0518, Ks = 0.1871)

SDR39U1 ENSG00000100445 (Human)

Gene Details

short chain dehydrogenase/reductase family 39U, member 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000382327, Human)

Protein Percentage 86.35%
CDS Percentage 89.53%
Ka/Ks Ratio 0.32012 (Ka = 0.0742, Ks = 0.2319)

Sdr39u1 ENSMUSG00000022223 (Mouse)

Gene Details

short chain dehydrogenase/reductase family 39U, member 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000106957, Mouse)

Protein Percentage 85.67%
CDS Percentage 84.64%
Ka/Ks Ratio 0.20694 (Ka = 0.091, Ks = 0.4398)

Sdr39u1 ENSRNOG00000020544 (Rat)

Gene Details

short chain dehydrogenase/reductase family 39U, member 1 (Sdr39u1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000063340, Rat)

Protein Percentage 84.01%
CDS Percentage 83.33%
Ka/Ks Ratio 0.18521 (Ka = 0.0958, Ks = 0.5172)

Genome Location

Sequence Coding sequence

Length: 885 bp    Location: 8072579..8075673   Strand: +
>XM_004864067.1
ATGCGGGTGCTAGTGGGTGGCGGGACAGGCTTCATTGGGCAAGCCCTAACCCAGCTGCTGAAATCCAGGGGCCACGAGGTGACCCTGGTCTCCCGACGCCCGGGGCCCGCCCGGATCACGTGGGAGGAGCTCGCCTGGTCGGGGCTGCCGAGCTGCGATGCCGTGGTCAACCTGGCCGGAGAGAACATCCTCAACCCTCTCCGAAGGTGGAATGAAGCCTTCCAAAAAGAGGTTCTCAGCAGCCGCCTGGAGACCACCCAAATGCTAGCAAAAGCCATCACCAAAGCCCCACAAGCACCCCAGGCCTGGATTGTAGTCACAGGCGTAGCTTACTACCAGCCCAGCCTGACTGCAGAGTATGATGAGGCCAGCCCAGGAGGAGATTTCGACTTTTTCTCCAAACTTGTGACCAGATGGGAAGCTGTAGCCAGGCTTCCCGGAGATTCTACACGTCAGGTGGTGGTACGCTCTGGGGTTGTGCTGGGCCGTGGAGGTGGTGCCATCGGCCATATGCTGCTGCCCTTCCGTCTGGGCCTGGGGGGCCCCATCGGCTCAGGCCGCCAGTTCTTCCCTTGGATTCACATCAGGGACCTGGTAGGAATCCTGACCCATGCCCTTGAAGCAAACCACGTGCAGGGGATCCTCAATGGAGTGGCTCCAGCCTCCACCACTACCAGTGCTGAGTTTGCCCGAGCCTTGGGTGCTGCCCTGGGCCGCCCAGCCTTCATCCCTGTCCCCAGCACTGTGGTACAAGCTGTCTTTGGGCAAGAACGTGCCATCATGCTGCTGGAGGGCCAGAAGGTGGTCCCACGGCGGACACTGGCCACTGGCTACCAATATTCCTTCCCAGAGCTGGAGGCCGCCTTGAAGGAAGTCGTAGCCTAA

Related Sequences

XP_004864124.1 Protein

Sdr39u1 PREDICTED: epimerase family protein SDR39U1 [Heterocephalus glaber]

Length: 294 aa      View alignments
>XP_004864124.1
MRVLVGGGTGFIGQALTQLLKSRGHEVTLVSRRPGPARITWEELAWSGLPSCDAVVNLAGENILNPLRRWNEAFQKEVLSSRLETTQMLAKAITKAPQAPQAWIVVTGVAYYQPSLTAEYDEASPGGDFDFFSKLVTRWEAVARLPGDSTRQVVVRSGVVLGRGGGAIGHMLLPFRLGLGGPIGSGRQFFPWIHIRDLVGILTHALEANHVQGILNGVAPASTTTSAEFARALGAALGRPAFIPVPSTVVQAVFGQERAIMLLEGQKVVPRRTLATGYQYSFPELEAALKEVVA