Sequence details NCBI ID: XM_004864050.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Prkd1
Gene Name protein kinase D1, transcript variant X6
Entrez Gene ID 101705616

Database interlinks

Part of NW_004624820.1 (Scaffold)

For more information consult the page for NW_004624820.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PRKD1 ENSCPOG00000004855 (Guinea pig)

Gene Details

protein kinase D1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004368, Guinea pig)

Protein Percentage 94.98%
CDS Percentage 91.99%
Ka/Ks Ratio 0.09945 (Ka = 0.0292, Ks = 0.2932)

PRKD1 ENSG00000184304 (Human)

Gene Details

protein kinase D1

External Links

Gene Match (Ensembl Protein ID: ENSP00000333568, Human)

Protein Percentage 93.96%
CDS Percentage 91.0%
Ka/Ks Ratio 0.10632 (Ka = 0.0341, Ks = 0.3203)

Prkd1 ENSMUSG00000002688 (Mouse)

Gene Details

protein kinase D1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000002765, Mouse)

Protein Percentage 91.91%
CDS Percentage 87.54%
Ka/Ks Ratio 0.08423 (Ka = 0.0448, Ks = 0.5317)

Prkd1 ENSRNOG00000004165 (Rat)

Gene Details

protein kinase D1 (Prkd1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000063159, Rat)

Protein Percentage 92.03%
CDS Percentage 87.58%
Ka/Ks Ratio 0.08546 (Ka = 0.0441, Ks = 0.5163)

Genome Location

Sequence Coding sequence

Length: 2451 bp    Location: 2408706..2726167   Strand: +
Raw sequence   
>XM_004864050.1
ATGGCTTGCTCCATCGTGGACCAGAAGTTCCCTGAATGTGGTTTCTATGGAATGTATGATAAGATCCTGCTTTTTCGCCATGACCCTACCTCTGAAAACATCCTTCAGCTGGTAAAAACGGCCAATGACATCCAGGAAGGCGACCTTATTGAAGTGGTTTTGTCAGCTTCTGCTACATTTGAAGATTTCCAGATCCGTCCCCATGCTCTCTTCGTTCATTCCTACCGAGCTCCGGCTTTCTGTGATCACTGTGGAGAAATGCTGTGGGGCCTGGTGCGTCAAGGCCTTAAATGTGAAGGATGTGGTCAGAATTACCATAAGAGATGTGCATTTAAAATTCCGAACAACTGCAGTGGTGTGAGACGGAGAAGGCTCTCGAATGTTTCCCTCACCGGGCTCAACACCATCCGCACATCTTCCACTGAGCTCTCTACCAGTGCTCCTGATGAGCCCCTTCTGCACGCTGCCACTGAGCTAAATCCCTACAAGTTTACCCCTTGTAAGGCAAGCACTAGGTCAAATTCTCAGTCATACATTGGAAGACCAATTCAGCTCGACAAGATGCTGATGTTCAAGGTTAAAGTGCCGCACACGTTCGTCATCCATTCCTACACTCGGCCCACGGTATGCCAGTACTGCAAGAAGCTCCTCAAGGGTCTTTTCAGGCAGGGCCTGCAGTGCAAAGATTGCAGATTCAACTGTCATAAACGTTGTGCACAAAAAGTACCCAACAACTGCCTGGGCGAAGTGACCATCAATGGAGAATCTGATGTGGTCATGGAAGAAGGAAGTGATGATAATGACAGTGAAAGAAACAGTGGGCTTATGGATGATATGGAGGAGGCAATGGTCCAAGATGCGGAGATGGCCATGGCCGAGGGCCAGAGTGACAGTGGGGAAATTCCATCTACAAGCAACAATATCCCACTCATGAGGGTGGTGCAGTCTATCAAGCACACAAAGAGGAAAAGCAGTTCCGTGATGAAGGAAGGGTGGATGGTCCACTACACCAGCAAGGACACACTGCGGAAACGGCACTATTGGAGATTGGATAGCAAATGCATCACACTCTTTCAAAATGACACAGGAAGCAGGTACTACAAGGAAATTCCTTTATCAGAAATTTTATCTCTGGAAGCAGCAAAAACTTCAGCATTAATTCCTAATGGAGCCAATCCTCACTGTTTTGAAATCACTACAACAAATGTAGTGTATTATGTGGGAGAAGATACAGTCAATCCTTCCAGCCCCCCACCAAATAGCAGTGTCCTCACCAGTGGTGTCGGTGCAGATGTGGCCAGGAGGTGGGAAATGGCCATCCAACATGCGCTCATGCCCGTCATTCCCAAGGGCTCCTCTCTGGGCTCAGGAACCAACTTGCACAAAGATATTTCTGTGAGCATTTCAGTATCAAATTGCCAGATTCAAGAAAATGTGGACATCAGCACAGTGTATCAGATTTTTCCTGATGAAGTACTGGGTTCTGGACAGTTTGGAATTGTTTATGGAGGAAAACATCGTAAAACAGGAAGAGATGTAGCTATTAAAATCATTGACAAATTACGATTTCCAACTAAACAAGAAAGCCAGCTTCGTAATGAGGTTGCAATTTTACAGAACCTTCATCACCCTGGTGTTGTAAATTTGGAGTGTATGTTTGAGACGCCTGAAAGAGTGTTTGTTGTTATGGAAAAACTCCATGGAGACATGCTAGAGATGATCTTGTCAAGTGAAAAGGGCAGGTTGCCAGAGCATATAACGAAGTTTTTAATTACTCAGATACTTGTGGCTTTGCGGCATCTTCATTTTAAAAATATCGTTCACTGTGACCTCAAGCCAGAAAACGTATTGTTAGCATCAGCGGATCCTGTCCCTCAGGTGAAACTTTGTGATTTTGGCTTTGCCCGGATCATTGGGGAGAAGTCTTTTCGGAGATCCGTGGTGGGTACCCCAGCCTACCTGGCACCTGAGGTCCTAAGGAACAAGGGCTATAATCGCTCTCTAGACATGTGGTCAGTTGGGGTCATCATCTATGTAAGCCTCAGCGGCACATTCCCATTTAATGAAGATGAAGACATACACGACCAAATCCAGAATGCAGCTTTCATGTATCCACCAAATCCCTGGAAGGAAATCTCTCATGAAGCCATTGACCTTATTAATAATTTGCTTCAAGTGAAAATGAGGAAGCGCTATAGTGTGGATAAGACCTTGAGTCACCCTTGGCTGCAGGACTATCAGACCTGGTTAGATTTACGAGAGCTGGAATGCAAAATTGGGGAACGCTACATCACCCATGAAAGTGATGACTCGAGGTGGGAACAGTATGCGGGCGAGCAGGGCCTGCAGTACCCTGCACACCTGATCAGTCTGAGTGCTAGCCACAGTGACAGTCCTGAGACTGAAGAGAGAGAGATGAAAGCCCTCAGTGAGCGTGTCAGCATCCTCTGA

Related Sequences

XP_004864107.1 Protein

Prkd1 PREDICTED: serine/threonine-protein kinase D1 isoform X6 [Heterocephalus glaber]

Length: 816 aa      View alignments
>XP_004864107.1
MACSIVDQKFPECGFYGMYDKILLFRHDPTSENILQLVKTANDIQEGDLIEVVLSASATFEDFQIRPHALFVHSYRAPAFCDHCGEMLWGLVRQGLKCEGCGQNYHKRCAFKIPNNCSGVRRRRLSNVSLTGLNTIRTSSTELSTSAPDEPLLHAATELNPYKFTPCKASTRSNSQSYIGRPIQLDKMLMFKVKVPHTFVIHSYTRPTVCQYCKKLLKGLFRQGLQCKDCRFNCHKRCAQKVPNNCLGEVTINGESDVVMEEGSDDNDSERNSGLMDDMEEAMVQDAEMAMAEGQSDSGEIPSTSNNIPLMRVVQSIKHTKRKSSSVMKEGWMVHYTSKDTLRKRHYWRLDSKCITLFQNDTGSRYYKEIPLSEILSLEAAKTSALIPNGANPHCFEITTTNVVYYVGEDTVNPSSPPPNSSVLTSGVGADVARRWEMAIQHALMPVIPKGSSLGSGTNLHKDISVSISVSNCQIQENVDISTVYQIFPDEVLGSGQFGIVYGGKHRKTGRDVAIKIIDKLRFPTKQESQLRNEVAILQNLHHPGVVNLECMFETPERVFVVMEKLHGDMLEMILSSEKGRLPEHITKFLITQILVALRHLHFKNIVHCDLKPENVLLASADPVPQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDIHDQIQNAAFMYPPNPWKEISHEAIDLINNLLQVKMRKRYSVDKTLSHPWLQDYQTWLDLRELECKIGERYITHESDDSRWEQYAGEQGLQYPAHLISLSASHSDSPETEEREMKALSERVSIL