Sequence details NCBI ID: XM_004864017.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Impg1
Gene Name interphotoreceptor matrix proteoglycan 1
Entrez Gene ID 101720746

Database interlinks

Part of NW_004624819.1 (Scaffold)

For more information consult the page for NW_004624819.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

IMPG1 ENSCPOG00000007022 (Guinea pig)

Gene Details

interphotoreceptor matrix proteoglycan 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006334, Guinea pig)

Protein Percentage 74.64%
CDS Percentage 83.22%
Ka/Ks Ratio 0.52079 (Ka = 0.159, Ks = 0.3053)

IMPG1 ENSG00000112706 (Human)

Gene Details

interphotoreceptor matrix proteoglycan 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000358966, Human)

Protein Percentage 70.51%
CDS Percentage 81.21%
Ka/Ks Ratio 0.53139 (Ka = 0.1852, Ks = 0.3486)

Impg1 ENSMUSG00000032343 (Mouse)

Gene Details

interphotoreceptor matrix proteoglycan 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000108876, Mouse)

Protein Percentage 62.27%
CDS Percentage 74.41%
Ka/Ks Ratio 0.48604 (Ka = 0.2625, Ks = 0.5401)

Impg1 ENSRNOG00000012479 (Rat)

Gene Details

interphotoreceptor matrix proteoglycan 1 (Impg1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000017048, Rat)

Protein Percentage 59.84%
CDS Percentage 72.97%
Ka/Ks Ratio 0.49342 (Ka = 0.2843, Ks = 0.5763)

Genome Location

Sequence Coding sequence

Length: 2745 bp    Location: 3148623..3003334   Strand: -
Raw sequence   
>XM_004864017.1
ATGTATTTGGAAATTAGAAGGGCTATTTTTGTGTTTTGGATTTTTCTCCAAGTTCAAGGAACCAAAGATACTTCCATTAAAATAAACCATTTGGAAACCGAAGACATAGACAATGTCCCAAGAATCGAAACAACTGAAAGTACTGCAAAAATGCAGAAAGTGTCAACCATGAGACGAATATTCGATTTGGCAAAACTTCGAACAAAAAGATCAGTACTTTTCCCAGCCGGGGTTAATGTCTGTCCACAGGAGTCCATGAAACAGATTTTAGCCAGTCTTCAAGCTTATTATAGATTGAGAGTGTGCCAGGAAGCAGTATGGGAAGCATACCGGATCTTTCTGGATCGCATCCCTGACACAGGGGAATACCAGGACTGGGTCAGCACCTGCCAGCAGGAGACCTTCCGCCTCTTTGACATTGGGAGAAACTTCAGCAGCTCACGAGAGCACCTGGATCTTCTTCAACAGAGAATAAAACAGAGAAGCTTCCCTGAGAAGACAGATGAAGAGCCCACCGAGCTCACCTTGCTGGAGCCAGCTGAGACTCCTGTGCGCCCAACAGTTGTTACCAACGTCTCACTTGGTTTCTTCTCTCCCTCTCCTGATGACACACACATCCATGAATCCCTCGATGACTCCTTGAAGGGTACCAAGAAGCCTACAATGGACAGAGAAACAGACATCACTGATGTTTCCCAGAGCCCACAGGAGCAGAAGGTCGAGTTCATCATCTTCCTACCAAACCAGAGATTCAAAGCAGAGCTTGCTGACCACCGGTCTGCCTCTTACCAGGAGCTGGCAGGAAAGTCACAGATACAGATACAAAAGGTATTTAAGAAACTTCCAGGATTCAAAGAACTCCATGTGTTAGGATTTAGACCAAAGAAAGAAAGAGATGGTTCCAGCTCCATAGAGATGAGACTTGTGGCCATCTTTAAGAGAGATGATGCAGAAGCAAAAAGCCCCACAAGTGACCTCCTGCCTTTTGATTCCAACAAAATTGAAAGTGAAGTTGTCCATCAAGGAACAATGGAGGAAGACAAGCAACCAAAAATTGATCTTACAGCTATAGACTTCAAAAAGCTGATTAGAAGAGCTCTAGAGGAAGAACAATCCTTGGATATGGGGACCATTCAATTCCCTGACGAAGTTGTTGGGTTCCTGCCCGTCTCTGGACCAGACATCCGCCCAGGGCTGCCTCCGCCCCTGCCCAGCATTGCAAAGGTGGCTACTTTGAGTCCAGAACCTGCTCTTAGTGAGCCCAAGCTGGAGACCGGGGGCAGAAAAGGATACGACCTCCTGGTTGAACAATCGGACCTCGTTCTTGTCAGGTGCTGCCGGCTCATCCAACAGCCTGGTATTGTTCACCCATACCATTACTTCTCCATTTTTTCAGCTCGTTGGATGTACAACAGGTGGATCAGGGCAGGCTCCGCATCAGCATACACTGGCGGAGCAGATGGCTTAGTTTCACTTTCTATAGGAGGCGGAGGGCCAACCTCGGGAACACCAGCCTTGTCGGGCTCCTCCGAGGAAGGACTTGAGGAGGGTCCTTCAACCCGCTCTCCCTCATGCCGAGGATCCAAACTATCTCTAATTAAAGCCCATAAACTAAAAGCTTCAGCGGGCCCAAGACCTCCTACTTTGGACTGGACCAATTCATCTGTGGCCTTGGCTTTGGCAGACCTCTTATCTTTGGGAACCACGTGGACAACGAAATTGGTCACAGGCGCTTCCTCCACCGGCAGTTCTTGGACTTCACCGGCAGGGGTCTCTACTTCCCTATCAGAAACTCTACCACTCTCTTCCACATCAAGCGTCTTCTCCCTCACTGATCAAGGCACCACAGACGTAAAGTCCACTGACCAAACAGTGCTAGTCCCAGAGGTCACCGTCCCCACTCGTGATTCTTCTGCCGTTGGTGAGTTGGCTCTGGAAAGTCCACATTCGCCTGTATCTCCGTATGATGGCAGGTTGAGTACAGCTGGCCAAGATGTGACCGGCGACCAAGATAGAATGGCAGTGTCTAACACTCGTGCCCTGTTGGAAGAACTGGGACTGCATGGATATGTTTCTTCCCCAGATCATTTCCCGGAGAGAACCACTCCTGTCCCAGCACTGCAGTACATCACCACTGGCTCTATGACCATTGCCACCGAGGGCCGAGAGCTGGTAGTCTTCTTCAGTCTGCGTGTTGCTAACATGCCCTTCTCCGACCACCTGTTCAACAAGAGCTCTCTGGAGTACCAAGCTCTGGAGCAACGATTCACACAGCTGCTGGTTCCATATCTAAGATCCAATCTCACGGGGTTTAAGCAACTTGAAATACTTAACTTCAGAAACGGTAGTGTGATCGTGAACAGCAAGATGAGGTTTGCTGAGTCCATCCCATACAACCTCGCCGAGGCTGTGCATGGCGTCTTGGAGGATCTTTGTTCCATTGCATCCCAACAGCTAGATCTGGAAATAGACAGCTTCTCTCTGAACATCAAACCAGATGACCCAGAAGATCCCTGCAGATCCCTGGCTTGTGGTGAATTTGCCCAGTGTGTGAAGAATGAGCAGACTGGGGCTCAGGGAAAAGGAGCTCCATGCAGGTCAACAGATCACTCTAAAAACCAAGTACATGAAACACATGGTAAAAATTTCCAACATCTGCAAAATAAGATAACCAAGAAAAGAAATTCTGAATTACTGGCTGCAGGATTTGAAGAATTTAACCATCAAGATTGGGAAAGAAATTAA

Related Sequences

XP_004864074.1 Protein

Impg1 PREDICTED: interphotoreceptor matrix proteoglycan 1 [Heterocephalus glaber]

Length: 914 aa      View alignments
>XP_004864074.1
MYLEIRRAIFVFWIFLQVQGTKDTSIKINHLETEDIDNVPRIETTESTAKMQKVSTMRRIFDLAKLRTKRSVLFPAGVNVCPQESMKQILASLQAYYRLRVCQEAVWEAYRIFLDRIPDTGEYQDWVSTCQQETFRLFDIGRNFSSSREHLDLLQQRIKQRSFPEKTDEEPTELTLLEPAETPVRPTVVTNVSLGFFSPSPDDTHIHESLDDSLKGTKKPTMDRETDITDVSQSPQEQKVEFIIFLPNQRFKAELADHRSASYQELAGKSQIQIQKVFKKLPGFKELHVLGFRPKKERDGSSSIEMRLVAIFKRDDAEAKSPTSDLLPFDSNKIESEVVHQGTMEEDKQPKIDLTAIDFKKLIRRALEEEQSLDMGTIQFPDEVVGFLPVSGPDIRPGLPPPLPSIAKVATLSPEPALSEPKLETGGRKGYDLLVEQSDLVLVRCCRLIQQPGIVHPYHYFSIFSARWMYNRWIRAGSASAYTGGADGLVSLSIGGGGPTSGTPALSGSSEEGLEEGPSTRSPSCRGSKLSLIKAHKLKASAGPRPPTLDWTNSSVALALADLLSLGTTWTTKLVTGASSTGSSWTSPAGVSTSLSETLPLSSTSSVFSLTDQGTTDVKSTDQTVLVPEVTVPTRDSSAVGELALESPHSPVSPYDGRLSTAGQDVTGDQDRMAVSNTRALLEELGLHGYVSSPDHFPERTTPVPALQYITTGSMTIATEGRELVVFFSLRVANMPFSDHLFNKSSLEYQALEQRFTQLLVPYLRSNLTGFKQLEILNFRNGSVIVNSKMRFAESIPYNLAEAVHGVLEDLCSIASQQLDLEIDSFSLNIKPDDPEDPCRSLACGEFAQCVKNEQTGAQGKGAPCRSTDHSKNQVHETHGKNFQHLQNKITKKRNSELLAAGFEEFNHQDWERN