Details from NCBI annotation

Gene Symbol Smap1
Gene Name small ArfGAP 1, transcript variant X4
Entrez Gene ID 101708052

Database interlinks

Part of NW_004624819.1 (Scaffold)

For more information consult the page for NW_004624819.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SMAP1 ENSCPOG00000014957 (Guinea pig)

Gene Details

small ArfGAP 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013479, Guinea pig)

Protein Percentage 84.74%
CDS Percentage 87.37%
Ka/Ks Ratio 0.39501 (Ka = 0.1024, Ks = 0.2593)

SMAP1 ENSG00000112305 (Human)

Gene Details

small ArfGAP 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000359484, Human)

Protein Percentage 86.91%
CDS Percentage 85.6%
Ka/Ks Ratio 0.19029 (Ka = 0.0837, Ks = 0.4399)

Smap1 ENSMUSG00000026155 (Mouse)

Gene Details

stromal membrane-associated protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000027339, Mouse)

Protein Percentage 83.86%
CDS Percentage 83.69%
Ka/Ks Ratio 0.20238 (Ka = 0.1023, Ks = 0.5054)

Smap1 ENSRNOG00000049127 (Rat)

Gene Details

small ArfGAP 1

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000067166, Rat)

Protein Percentage 84.13%
CDS Percentage 83.51%
Ka/Ks Ratio 0.19778 (Ka = 0.1026, Ks = 0.5186)

Genome Location

Sequence Coding sequence

Length: 1224 bp    Location: 9203114..9099000   Strand: -
>XM_004864001.1
ATGCAAGAAATCCTGGTGCCTTTTGAGAGGAAGATAGAGAAGTATTCTGGAAAATTTGAAGAGGTAGTCGAGTGCATGCAAGATATGGGAAATACTAAAGCAAGACTACTCTATGAAGCCAATCTTCCAGAGAACTTTCGAAGACCACAGACAGATCAAGCAGTAGAATTTTTCATCAGAGATAAATATGAAAAGAAGAAATATTATGATAAAAATGCTATAGCTATTACAAATATTTCCTCCTCTGATGCACCTCTTCAGCCTCTAGTATCTTCTCCTTCTCTGCAAACTGCTGTTGAGAAAAACAAATTGGAGAAAGAAAAGGAGAAGAAAAAGGAAGAGAAAAAGAGAGAAAAGGAGCCAGAAAAGCCTACAAAACCACTTACAACTGAAAAGCTACAGAAGAAAGAAGATCAACAATTGGAGCCTAAAAAAAGTACCAGCCCTAAAAAAGCTGCAGAGCCCACTGTTGATCTTTTAGGACTTGATGGCCCTGCCGAGGCACCAGTGACCAACGGGAACACAGCCGCGCTGCCGGCCCTGGGTGATGACCTGGACATCTTTGGCCCGATGATTTCTAACCCTTTGCCTGCAGCTGTCATGCCCCCAGCTCAGGGGAATCCCTCTGCACCAGCAGCTGCTGCCCTGTCTGCAGTCACATCTGGGGATCTGGACCTGTTCACTGAGCAAACTACAAAACCAGAAGAAGTAGCAAAGAAACAGCTCTCCAAAGACTCCATCTTATCTCTGTATGGGACGGGGACCATTCAGCAGCAAAGCACTCCTGGTGTGTTTATGGGACCCACAAATATACCATTTACCTCACAAGCACCAAGCACATTTCAAGGTTTCCCGGCGATGGGTGTGCCTGCGGCTCCTGGCCTCCTGGGAAATGTGATGGGTCCAAGCACAAGCATGATGGTGGGCGTGCCCATGCCCAACGGGTTCATGGGAAATGCACAAACCGGCGTGATGCCCCTTCCTCAAAATGCTGGTGGCTCCCAAGGAGGAATGGTGGGGCAGATGGGGACGCCCCAGAGTAAGTTCGGCCTGCCACCAGTGCAGCAGCCCCAGTGGGGCCTTTCTCAGATGAACCAGCAGATGGCGGGCATGGGCATCAGCAGCGCCAGCTCCACGCCGGGCCCCGGCCTGCCCCCCAGCACCACGGCGGGCTGGCCCGGGAGCTCGTCGGGCCAGACGCTGAGCACGCAGCTGTGGAAGTGA

Related Sequences

XP_004864058.1 Protein

Smap1 PREDICTED: stromal membrane-associated protein 1 isoform X4 [Heterocephalus glaber]

Length: 407 aa      View alignments
>XP_004864058.1
MQEILVPFERKIEKYSGKFEEVVECMQDMGNTKARLLYEANLPENFRRPQTDQAVEFFIRDKYEKKKYYDKNAIAITNISSSDAPLQPLVSSPSLQTAVEKNKLEKEKEKKKEEKKREKEPEKPTKPLTTEKLQKKEDQQLEPKKSTSPKKAAEPTVDLLGLDGPAEAPVTNGNTAALPALGDDLDIFGPMISNPLPAAVMPPAQGNPSAPAAAALSAVTSGDLDLFTEQTTKPEEVAKKQLSKDSILSLYGTGTIQQQSTPGVFMGPTNIPFTSQAPSTFQGFPAMGVPAAPGLLGNVMGPSTSMMVGVPMPNGFMGNAQTGVMPLPQNAGGSQGGMVGQMGTPQSKFGLPPVQQPQWGLSQMNQQMAGMGISSASSTPGPGLPPSTTAGWPGSSSGQTLSTQLWK