Details from NCBI annotation

Gene Symbol Samd11
Gene Name sterile alpha motif domain containing 11, transcript variant X1
Entrez Gene ID 101697811

Database interlinks

Part of NW_004624818.1 (Scaffold)

For more information consult the page for NW_004624818.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SAMD11 ENSCPOG00000012049 (Guinea pig)

Gene Details

sterile alpha motif domain containing 11

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010839, Guinea pig)

Protein Percentage 87.67%
CDS Percentage 88.62%
Ka/Ks Ratio 0.2155 (Ka = 0.0672, Ks = 0.312)

SAMD11 ENSG00000187634 (Human)

Gene Details

sterile alpha motif domain containing 11

External Links

Gene Match (Ensembl Protein ID: ENSP00000342313, Human)

Protein Percentage 82.67%
CDS Percentage 84.04%
Ka/Ks Ratio 0.16603 (Ka = 0.0968, Ks = 0.5832)

Samd11 ENSMUSG00000096351 (Mouse)

Gene Details

sterile alpha motif domain containing 11

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000136611, Mouse)

Protein Percentage 72.86%
CDS Percentage 76.33%
Ka/Ks Ratio 0.21625 (Ka = 0.1743, Ks = 0.806)

SAMD11 ENSRNOG00000020342 (Rat)

Gene Details

Protein Samd11; RCG31097, isoform CRA_a

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000027564, Rat)

Protein Percentage 74.26%
CDS Percentage 77.84%
Ka/Ks Ratio 0.23063 (Ka = 0.1604, Ks = 0.6954)

Genome Location

Sequence Coding sequence

Length: 1998 bp    Location: 8580523..8563793   Strand: -
>XM_004863903.1
ATGTCCAAGGGGATCCTGCAGGTGCACCCTCCGATCTGCGATTGTCCGGGCTGTCGAATATCCTCGCCGGTGAACCGGGGGCGGCTGGCAGACAGGAGGACAGTCGCCCTGCCCCAGACACGTGCCCTGAAGAAGGAGAGGACTCCCAGCTTCTCTGCCAGTGACGGAGACAGTGACGGGGGTGGCCCGGCCTGTGGGCGGCGGCCCGGCTTGAAGCAGGAGGATGCCCCACACGTCCGTATCATGAAGAGAAGAGTCCACACCCACTGGGACGTGAACATCTCCTTCCGAGAGACATCCTGCAGCCAGGACAGCAGCCTTCCTACTCTCATATCCAGTGTACATCGAAACCACCACCTCGTTATGCCCGAGCATCAGAGTCGCTGTGAATTCCAGAGAGGCAGCGTGGAGATTGGCCTGGGACCCACAGGTGACTCATTAGGCAGGAGGCTGGGCTGCTCTCCTCACATCAGCAGTGACTGCTCTTCGGCAAAGCGGGCCCGAAGCAAGTCCCCCCAAGATACCCTGCTGCTGCCGGAACTGGGGCCCAGCATGGCCCCTGAGGACCACTATCGGCGGCTCGTGTCAGCCCTCAGTGAGGGCAGCACCTTTGAGGACCCTCAGCGTCTCTACCCTCTGGGCCTCCCCACCCATGATCTCATGCGGGTCCGGCAGGAGGTGGCAGCTGCAGCTTTGAGAGGCCCCAGTAGCCTGGACGTCCACCTGCCCTCACCCGCAGCGGGTCAGCGCCGGAAGCAGGGCCTGGCGCAGCACCGCGAGGGGCCCACGCCAACAGCTGCCGCGTCCTTCTCCGAGAGGGAGCTGTCGCAGCCGCCCCCCTTGCTGTCGCCCCAGAATGCCTCCCACATCACCCTGGGCTCCCATCTCAGGCCCCCCTTTTTGGGGGTGCCCTCGGCTCTGTGCCAGACCCCAGGTTATGGCTTCCTGCCCCCCGCCCAGACGGAGATGCTGGCCCGGCAGCAGGAGCTACTGCGGAAGCAGAGCCTGGCTCGGCTGGAGATGTCGGCGGAACTGCTTCGCCAGAAGGAGTTGGAGAGCGCGCACCGGCCGCAGCTGCTGGCGCCTGAGGCGGCCTTGCGCGCCCCGGACAGCGCTGAGGAGCTGCAGCGGCGCGGGGCCTTGCTGGTGCTCAAGCACAGCTCGGCGCCGCTGCTAGCCCTGCCTCCCCAAGGCCCGCCGGGCCCTGGGCCCCCCACTCCGCACCACGAGTCTGCCTGCCGAGCTCCCCGGAAAGAGGGGACTGCCTCTGCCGTAGCCCGGCCCAGCGAACCTAAGGAGCCAACAGGGGTTGCGCTCTGGGCTCAAGATGGCGCAGAGGAGGCGCCCAAAGACTCAGACGGAGAGGACCCCGAGACGGCAGTTACCGGGGACCGGGGCTCCACCCCAGCCCAAGCCCCAGCTGGAGGGAGCAGCACGGAGGGGAAAAGGCCTCTCTCAGGGCCCACCCTGCCTCCACCCCTGCCCCTGGGCTTCCCCTATGCGGTTAGCCCCTACCTGCACACAGGAGCCACGGGGAGGCTCTTCGACGGGGAGGCAGCCACGGCTCCTGAGGACATCAGCAAGTGGACAGTGGACGATGTCTGCAACTTCGTGGGGGCCCTGTCTGGCTGCAGCGAGTATACTCGGGTGTTCAGAGAACAAGGAATCGATGGGGAGACTCTGCCTCTGCTGACTGAAGAGCACCTGCTGACCACCATGGGACTGAAGCTGGGGCCTGCCCTCAAGATCCGGGCCCAGGTGGCCAAGCGCCTGGGTCGTGTTTTCTACATGGCCAGCTTCCCAGTGGCTCTGCCGCTGCAGCCACCAACCCTTCGGGGTCCTGCGGAGCTCACCCCAGGAGAACAGTCACCAACAGTCACTTCCCCCTATGGGGAGAGCCACCCCATTGCTGGCCGAGCCTCGCCCAAGCAGGAGAATGGAACCTCGACCCTGGCTCTGGCCCCTGGGGCCCCCGACCCTTCCCAACCTCTGTGCTGA

Related Sequences

XP_004863960.1 Protein

Samd11 PREDICTED: sterile alpha motif domain-containing protein 11 isoform X1 [Heterocephalus glaber]

Length: 665 aa      View alignments
>XP_004863960.1
MSKGILQVHPPICDCPGCRISSPVNRGRLADRRTVALPQTRALKKERTPSFSASDGDSDGGGPACGRRPGLKQEDAPHVRIMKRRVHTHWDVNISFRETSCSQDSSLPTLISSVHRNHHLVMPEHQSRCEFQRGSVEIGLGPTGDSLGRRLGCSPHISSDCSSAKRARSKSPQDTLLLPELGPSMAPEDHYRRLVSALSEGSTFEDPQRLYPLGLPTHDLMRVRQEVAAAALRGPSSLDVHLPSPAAGQRRKQGLAQHREGPTPTAAASFSERELSQPPPLLSPQNASHITLGSHLRPPFLGVPSALCQTPGYGFLPPAQTEMLARQQELLRKQSLARLEMSAELLRQKELESAHRPQLLAPEAALRAPDSAEELQRRGALLVLKHSSAPLLALPPQGPPGPGPPTPHHESACRAPRKEGTASAVARPSEPKEPTGVALWAQDGAEEAPKDSDGEDPETAVTGDRGSTPAQAPAGGSSTEGKRPLSGPTLPPPLPLGFPYAVSPYLHTGATGRLFDGEAATAPEDISKWTVDDVCNFVGALSGCSEYTRVFREQGIDGETLPLLTEEHLLTTMGLKLGPALKIRAQVAKRLGRVFYMASFPVALPLQPPTLRGPAELTPGEQSPTVTSPYGESHPIAGRASPKQENGTSTLALAPGAPDPSQPLC