Details from NCBI annotation

Gene Symbol Sdf4
Gene Name stromal cell derived factor 4, transcript variant X5
Entrez Gene ID 101721571

Database interlinks

Part of NW_004624818.1 (Scaffold)

For more information consult the page for NW_004624818.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SDF4 ENSCPOG00000011687 (Guinea pig)

Gene Details

stromal cell derived factor 4

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010512, Guinea pig)

Protein Percentage 96.92%
CDS Percentage 92.44%
Ka/Ks Ratio 0.03904 (Ka = 0.0155, Ks = 0.3966)

SDF4 ENSG00000078808 (Human)

Gene Details

stromal cell derived factor 4

External Links

Gene Match (Ensembl Protein ID: ENSP00000353094, Human)

Protein Percentage 88.8%
CDS Percentage 85.62%
Ka/Ks Ratio 0.03484 (Ka = 0.0565, Ks = 1.6225)

Sdf4 ENSMUSG00000029076 (Mouse)

Gene Details

stromal cell derived factor 4

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000053175, Mouse)

Protein Percentage 90.76%
CDS Percentage 87.11%
Ka/Ks Ratio 0.05139 (Ka = 0.0446, Ks = 0.8686)

Sdf4 ENSRNOG00000019981 (Rat)

Gene Details

stromal cell derived factor 4 (Sdf4), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000027215, Rat)

Protein Percentage 90.76%
CDS Percentage 86.74%
Ka/Ks Ratio 0.05485 (Ka = 0.0469, Ks = 0.8558)

Genome Location

Sequence Coding sequence

Length: 1074 bp    Location: 8363347..8371967   Strand: +
>XM_004863886.1
ATGGCAATGGTTTCCAGGCAAGCCCCCCTCTGTGGCCTGGCCACACACTGCTTCTGGCTCCTGGGTTTTGTCCTTTTGATGGAGGCATCTGCACGGCCGGCCAATCACTCGTCCACCCGGGAGAGAGCGGCCAACAGGGAGGAAAAGGAGCTCCTGCCCCCAGACCACCTGAATGGGGTGAAGCTGGAGATGGATGGGCACCTCAACAAGGATTTCCACCAGGAGGTCTTCCTGGGGAAGGACGTGGGTGGCTTTGACGAGGACTCAGAGCCTCGCAGGAGCCGGAGGAAGCTGATGGTCATCTTCTCCAAAGTGGATGTGAACACAGACCGGAGGATCAGCGCCAAGGAGATGCAGCGCTGGATCATGGAGAAGACAGCTGAACACTTCCAGGAGGCTGTGAAGGAGAACAAGATGCACTTCCGGGCTGTGGACCCTGACGGCGATGGCCACGTGTCCTGGGATGAATACAAAGTGAAGTTTCTGACAAGCAAAGGCCACAATGAGAAAGAGGTTGCTGATGCGATCAGGAACCACGAGGAGCTGAAGGTGGATGAGGAGACACAGGAAGTCCTCGAGAACCTCAAAGACCGCTGGTATCAGGCAGACAACCCCCCTGCAGACCTGCTGCTGACTGAGGACGAGTTCTTGTCTTTCCTTCACCCTGAGCACAGCCGGGGCATGCTCAAGTTCATGGTCAAGGAGATTGTCCGGGACTTGGACCAGGATGGTGACAAGCAGCTTTCTCTGCCTGAGTTCATCTCCCTGCCTGTGGGCACAGTCGAGAACCAACAGGGCCAGGACATGGATGACAGCTGGGTCAGAGACAGGAAGAAAGAGTTCGAAGAGCTGATAGACTCCAACCATGATGGGATTGTGACCATGGAGGAGCTAGAGAACTACATGGACCCCATGAACGAGTACAGTGCCCTCAATGAGGCCAAGCAGATGATCGCCATTGCCGATGAGAACCAGAACCAGCACCTGGAGCCGGAGGAGATCCTCAAGTACAGCGAGTTCTTCACGGGCAGCAAGCTGGTGGACTACGCCCGGAACGTGCACGAGGAGTTCTGA

Related Sequences

XP_004863943.1 Protein

Sdf4 PREDICTED: 45 kDa calcium-binding protein isoform X5 [Heterocephalus glaber]

Length: 357 aa      View alignments
>XP_004863943.1
MAMVSRQAPLCGLATHCFWLLGFVLLMEASARPANHSSTRERAANREEKELLPPDHLNGVKLEMDGHLNKDFHQEVFLGKDVGGFDEDSEPRRSRRKLMVIFSKVDVNTDRRISAKEMQRWIMEKTAEHFQEAVKENKMHFRAVDPDGDGHVSWDEYKVKFLTSKGHNEKEVADAIRNHEELKVDEETQEVLENLKDRWYQADNPPADLLLTEDEFLSFLHPEHSRGMLKFMVKEIVRDLDQDGDKQLSLPEFISLPVGTVENQQGQDMDDSWVRDRKKEFEELIDSNHDGIVTMEELENYMDPMNEYSALNEAKQMIAIADENQNQHLEPEEILKYSEFFTGSKLVDYARNVHEEF