Details from NCBI annotation

Gene Symbol Cpsf3l
Gene Name cleavage and polyadenylation specific factor 3-like, transcript variant X1
Entrez Gene ID 101717953

Database interlinks

Part of NW_004624818.1 (Scaffold)

For more information consult the page for NW_004624818.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CPSF3L ENSCPOG00000005152 (Guinea pig)

Gene Details

cleavage and polyadenylation specific factor 3-like

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004634, Guinea pig)

Protein Percentage 99.0%
CDS Percentage 92.82%
Ka/Ks Ratio 0.01106 (Ka = 0.0051, Ks = 0.4572)

CPSF3L ENSG00000127054 (Human)

Gene Details

cleavage and polyadenylation specific factor 3-like

External Links

Gene Match (Ensembl Protein ID: ENSP00000445001, Human)

Protein Percentage 96.33%
CDS Percentage 89.54%
Ka/Ks Ratio 0.0218 (Ka = 0.0209, Ks = 0.9606)

Cpsf3l ENSMUSG00000029034 (Mouse)

Gene Details

cleavage and polyadenylation specific factor 3-like

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000030901, Mouse)

Protein Percentage 97.83%
CDS Percentage 87.98%
Ka/Ks Ratio 0.01072 (Ka = 0.0098, Ks = 0.9154)

Cpsf3l ENSRNOG00000019712 (Rat)

Gene Details

cleavage and polyadenylation specific factor 3-like (Cpsf3l), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000026725, Rat)

Protein Percentage 97.83%
CDS Percentage 89.65%
Ka/Ks Ratio 0.01389 (Ka = 0.0097, Ks = 0.6951)

Genome Location

Sequence Coding sequence

Length: 1800 bp    Location: 8287557..8299456   Strand: +
>XM_004863869.1
ATGCCTGAAATCAGAGTCACCCCTTTGGGGGCTGGCCAGGATGTCGGCCGCAGCTGTATCTTGGTCTCCATCGCTGGCAAGAACGTCATGTTGGACTGTGGCATGCACATGGGCTTCAACGATGATAGGCGCTTTCCCGATTTTTCCTATATCACCCAGAATGGCCGGCTGACTGACTTTTTGGACTGCGTGATCATCAGCCACTTCCACCTGGACCACTGTGGGGCGCTCCCCTACTTCAGTGAGATGGTGGGCTATGATGGGCCCATCTATATGACCCACCCCACCCAGGCCATCTGCCCCATCTTGCTGGAGGACTACCGAAAGATCGCTGTGGACAAGAAGGGCGAGGCCAACTTCTTCACTTCCCAGATGATCAAAGACTGCATGAAGAAGGTGGTGGCCGTCCACCTGCACCAGACAGTCCAGGTGGATGACGAGCTGGAAATCAAGGCCTACTATGCAGGCCACGTGCTGGGGGCTGCCATGTTCCAGATTAAAGTGGGCTCAGAATCTGTGGTCTATACGGGTGATTATAACATGACCCCAGACCGGCATTTGGGAGCTGCTTGGATTGATAAGTGTCGCCCCAACCTGCTCATCACGGAGTCCACCTATGCCACCACCATCCGTGACTCCAAGCGCTGCCGGGAGCGAGACTTCTTGAAGAAAGTCCACGAGACTGTGGAGCGTGGCGGGAAGGTGCTGATCCCCGTGTTTGCGCTGGGCCGTGCGCAGGAGCTCTGCATCCTGCTGGAGACCTTCTGGGAGCGCATGAACCTGAAGGTGCCCATCTACTTCTCCACGGGCCTGACGGAGAAGGCCAACCACTACTACAAGCTCTTCATCACCTGGACCAACCAGAAGATCCGGAAGACCTTTGTCCAGAGGAACATGTTTGAGTTCAAGCACATCAAGGCCTTTGACCGGGCGTTTGCTGACAACCCAGGTCCCATGGTTGTTTTTGCCACACCAGGGATGCTGCATGCCGGCCAGTCCCTGCAGATCTTCCGGAAGTGGGCAGGAAACGAGAAGAACATGGTCATCATGCCTGGCTACTGTGTGCAGGGCACTGTGGGCCACAAGATCCTCAGTGGGCAGCGCAAGCTGGAGATGGAGGGCCGGCAGGTGCTGGAGGTTAAGATGCAGGTGGAGTACATGTCATTCAGTGCCCACGCCGACGCCAAGGGCATCATGCAGCTGGTGGGGCAGGCAGAGCCAGAGAGCGTGCTGCTGGTGCACGGTGAGGCGAAGAAGATGGGCTTCCTGCGGCAGAAGATCGAGCAGGAGCTGCGTGTCAGCTGCTACATGCCAGCCAACGGCGAGACAGTGACACTGCCCACGAGCCCCAGCATCCCCGTGGGCATCTCCCTGGGGCTGCTGAAGCGGGAGATGGCACAGGGGCTGCTCCCGGAGGCCAAAAAGCCACGGCTCTTGCACGGCACCCTCATCATGAAGGACAGCAACTTCCGACTGGTGTCCTCTGAACAAGCCCTGAAGGAGCTGGGCCTGGCCGAGCACCAGCTGCGCTTCACCTGCCGTGTGCACCTGCAGGACACACGCAAGGAGCAGGAGATGGCCCTACGCGTCTACAGCCACCTCAAGAGCACCCTGAAGGATCACTGTGTGCAGCATCTTCCTGATGGCTCTGTGACTGTGGAGTCCATCCTTATCCAGGCTGCTGCCCACTCTGAGGACCCAGGTGCCAAGGTGCTGCTGGTGTCCTGGACCTACCAGGATGAGGAACTGGGGAGCTTCCTTACCGCACTGCTCAAGAAGGGTCTCCCCCAGACCCCTTAG

Related Sequences

XP_004863926.1 Protein

Cpsf3l PREDICTED: integrator complex subunit 11 isoform X1 [Heterocephalus glaber]

Length: 599 aa      View alignments
>XP_004863926.1
MPEIRVTPLGAGQDVGRSCILVSIAGKNVMLDCGMHMGFNDDRRFPDFSYITQNGRLTDFLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDKKGEANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHVLGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLITESTYATTIRDSKRCRERDFLKKVHETVERGGKVLIPVFALGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFITWTNQKIRKTFVQRNMFEFKHIKAFDRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIMPGYCVQGTVGHKILSGQRKLEMEGRQVLEVKMQVEYMSFSAHADAKGIMQLVGQAEPESVLLVHGEAKKMGFLRQKIEQELRVSCYMPANGETVTLPTSPSIPVGISLGLLKREMAQGLLPEAKKPRLLHGTLIMKDSNFRLVSSEQALKELGLAEHQLRFTCRVHLQDTRKEQEMALRVYSHLKSTLKDHCVQHLPDGSVTVESILIQAAAHSEDPGAKVLLVSWTYQDEELGSFLTALLKKGLPQTP