Sequence details NCBI ID: XM_004863868.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Pusl1
Gene Name pseudouridylate synthase-like 1, transcript variant X2
Entrez Gene ID 101717400

Database interlinks

Part of NW_004624818.1 (Scaffold)

For more information consult the page for NW_004624818.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PUSL1 ENSCPOG00000005149 (Guinea pig)

Gene Details

pseudouridylate synthase-like 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004631, Guinea pig)

Protein Percentage 84.26%
CDS Percentage 86.01%
Ka/Ks Ratio 0.20258 (Ka = 0.0868, Ks = 0.4283)

PUSL1 ENSG00000169972 (Human)

Gene Details

pseudouridylate synthase-like 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000368318, Human)

Protein Percentage 79.21%
CDS Percentage 81.19%
Ka/Ks Ratio 0.13569 (Ka = 0.1156, Ks = 0.8516)

Pusl1 ENSMUSG00000051557 (Mouse)

Gene Details

pseudouridylate synthase-like 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000095344, Mouse)

Protein Percentage 75.26%
CDS Percentage 77.78%
Ka/Ks Ratio 0.16665 (Ka = 0.1451, Ks = 0.8704)

Genome Location

Sequence Coding sequence

Length: 924 bp    Location: 8302320..8299631   Strand: -
Raw sequence   
>XM_004863868.1
ATGGGTCCACCGCTGCCTCCGGGCGCGGGGCTGGCGCGCTACCTCGTGTACTTCCAGTACGTGGGCACAGACTTTAACGGGGTCGCAGCTGTCAGGGGCGCCCAGCGGGCCGTCGGGGTCCAGAACTACCTGGAGGAGGCCGCGGAGCGGCTGAACTCGTTGGAGCCCATCAGGTTCACCCTCTCCAGCCGCACGGATGCAGGAGTTCATGCGCTCAGCAACGCGGCGCACCTCGATGTTCAGCGTCGCCAGGGCAAGCCGCCCTTCTCCCCCGAGATCTTGACTAAGGTTCTCAACACCCACCTGAGGCACCCAGCCATCAGGGTCCTGCAAGCCTTCCGAGTGCCCAGCGACTTTCATGCTCGCTATGCAGCCACCTCCAGGACATACCTGTACCGACTGGTGATGGGCTGTGACTGGCCTCACCAGCTGCCTGTGTTTGAACGAAACCTGTGCTGGGCTCTACCGGCAAACCACCTGGATGTGGCTGCCATGCAGGTGGCTGCCCAGCACCTCCTTGGGACACATGACTTCAGTGCCTTCCAGTCGACTGGTAGCCCAACCCCAAGCTCCATCCGCACACTGCGCCACATCTCAGTGTCCCCTGGCCTGGCCAGCCCCTTGGTCCCCTCCTCCCAGGAGAGCAGGAGGCTACAGTTCTGGAACCTGGAGTTTGAGAGCCAGTCTTTCCTGTACCGACAGGTTCGGAGGATGACAGCTGTGCTGGTGGCTGTGGGGCTAGGGGCTTTGAAGCCAGCCCAGGTGAAGGAGATTCTGGAAAGCAGAGACCCTCTAGGCAAGCACCAGGCTCGTGTGGCCCCAGCCCAGGGCTTGTTTCTGAAGTCAGTGATCTACGGAGACCTTGGGCAGGCTGGTCCTGCCTCCTACACCACACAGAGTCTACAGTATGGAAACTCCCAGTGA

Related Sequences

XP_004863925.1 Protein

Pusl1 PREDICTED: tRNA pseudouridine synthase-like 1 isoform X2 [Heterocephalus glaber]

Length: 307 aa      View alignments
>XP_004863925.1
MGPPLPPGAGLARYLVYFQYVGTDFNGVAAVRGAQRAVGVQNYLEEAAERLNSLEPIRFTLSSRTDAGVHALSNAAHLDVQRRQGKPPFSPEILTKVLNTHLRHPAIRVLQAFRVPSDFHARYAATSRTYLYRLVMGCDWPHQLPVFERNLCWALPANHLDVAAMQVAAQHLLGTHDFSAFQSTGSPTPSSIRTLRHISVSPGLASPLVPSSQESRRLQFWNLEFESQSFLYRQVRRMTAVLVAVGLGALKPAQVKEILESRDPLGKHQARVAPAQGLFLKSVIYGDLGQAGPASYTTQSLQYGNSQ