Sequence details NCBI ID: XM_004863779.1 (Coding sequence)

Details from NCBI annotation

Gene Symbol Prdm16
Gene Name PR domain containing 16, transcript variant X1
Entrez Gene ID 101721685

Database interlinks

Part of NW_004624818.1 (Scaffold)

For more information consult the page for NW_004624818.1 (Scaffold)

Genome Location

Sequence Coding sequence

Length: 3810 bp    Location: 7258355..6979718   Strand: -
Raw sequence   
>XM_004863779.1
ATGCGATCCAAGGCGAGGGCGCGGAAGCTAGCCAAAAGTGACGGAGACGTTGTAAATAATATGTATGAGCCTGACCCGGACCTGCTGGCCGGCCAGAGTGCCGAGGAGGAGACCGAGGACAGCATCCTGTCCCCCATCCCCATGGGGCCGCCGTCCCCCTTCCCCACCAGTGAGGACTTCACCCCCAAGGAAGGCTCGCCCTACGAGGCCCCTGTCTACATTCCCGAAGACATTCCCATCCCGCCAGACTTGGAGCTGCGGGAGTCCTCCATCCCCGGGGCCGGCCTGGGGATCTGGGCCAAGCGGAAGATGGAAGTCGGGGAGAGGTTTGGCCCCTACATGCTGGCGCCCCGGGCCGCGCTGAAGGAGGCAGACTTTGGATGGGAGCCGATGCTGACAGCTACGGAGGTGTCATCCCAGGAAGGCTGCATCAAGAAGATCTCTGAGGACCTGGGCAGTGAGAAGTTCTGTGTGGATGCCAGCCAGGTGGGGGCCGGCAGCTGGCTGAAGTACATCCGAGTGGCATGCTCCTGTGACAACCAAAACCTCACCATGTGCCAGATCAACGAGCAGATTTACTATAAAGTCATTAAGGACATCGAGCCAGGCGAGGAGCTGCTGGTGCACGTGAAGGAAGGCGCCTACTCGCTGCGTGCAGTGCCGCCCGGCCTGGATGAGGGGCCCACGTTCCGCTGTGAGGAGTGTGATGAGCTCTTCCAGTGCAAGCTAGACCTGCGGCGCCACAAGAAGTATGCATGCAGCTCCGCAGGGGCCGCGCTGTTCGAGGGCCTGGGGGACGAGCTCAAGCCTGAGGGCCTGGGCGGCGGGCAGGCTCACGAATGCAAGGACTGCGAGCGAATGTTCCCCAACAAATACAGCCTGGAGCAGCACATGATTGTCCACACGGAGGAGCGGGAATACAAGTGTGACCAGTGTCCCAAGGCCTTCAACTGGAAATCCAACCTCATCCGCCACCAGATGTCCCACGACAGCGGCAAGCGCTTCGAATGTGAAAACTGCGTGAAGGTGTTCACGGACCCCAGCAACCTGCAGCGGCACATCCGCTCGCAGCACGTCGGCGCCCGGGCCCACGCCTGCCCAGATTGCGGGAAGACCTTTGCCACGTCCTCCGGCCTGAAGCAGCACAAGCACATCCACAGCACGGTCAAGCCTTTCATATGTGAGGTCTGCCACAAGTCCTACACGCAGTTCTCCAACCTGTGCCGGCACAAGCGGATGCACGCTGACTGCCGCACGCAGATCAAGTGCAAGGACTGCGGGCAGATGTTCAGCACTACCTCGTCCCTCAACAAGCACCGGCGCTTCTGCGAGGGCAAGAACCATTACACGCCAGGCGGCCTGTTCACCCCGGGCCTGCCCCTGACCCCCAGCCCCATGATGGACAAGGCCAAGCCCTCGCCCAGCCTCAACCACGCCGGCCTGGCCTTCAGCGAGTACTTCCCCTCCCGGCCGCAGCCTGGCGGCCTGCCCTTCTCCGCCGCCCCGCCAGCCTTCCCTGCGCTCACTCCCGGCTTCCCAGGCATCTTCCCTCCGTCCCTGTACCCCCGGCCGCCTCTGCTGCCTCCCACGCCGCTGCTCAAGAGCCCCCTGAACCACACCCAGGACGCTAAGCTGCCCAGCCCCCTGGGCAACCCGGCCCTGCCCCTCCTGTCCGCGGTCAGCAACAGCAGCCAGGGTGGCACGGCAGGCACTGGGCCGGAGGAGAAGTTCGAGAGCCACCTGGAGGACGTGTTCACGGACAAGGCCAAGGCCCGGAGCCCCGACATGTCCGACGGCAGCGACTTCGAGGACATCAACACCACCACAGGCACCGACCTGGACACCACCACGGGCACGGGCTCAGACCTGGACAGTGACGTGGACAGCGACCGCGACAGGGCCAAGGACGACGGAGGCAAGCCCGAGCGTGGGGGCGGCTCCGCAGCCCCAGGGGCCGCCAGCATGGCAGAGGCGCCCGTCTTCTACGCGCAGCACTCCTTCTTCCCGCCGCCTGAGGAGCAGCTGCTGGCCGCCTCGGGCGCCCCCGGCGACTCCATCAAAGCCATCGCGTCCATTGCTGAGAAGTACTTCGGGCCCGGCTTCGTGGGCATGCAGGAGAAAAAGCTGGGCTCGCTGCCCTACCACTCCGTCTTCCCCTTCCAGGTCCTGCCCAACTTCCCGCACTCCCTCTACTCCTTCACGGACCGCGCCCTCGCGCACAACCTGCTGGTCAAGGCCGAGCCCAAGTCGCCCCGGGACGCCCTCAAGGTGGGCGGCCCCAGTGCCGAGTGCCCCTTCGACCTCACCACCAAGCCGAAAGAGACGAAGCCCACCCTGCCCACGCCCAAGGCGCCCTCAGCCCCCGTGTCTGGCGAGGAGCAGCCGCTGGACCTGAGTATCGGCAGCCGGGCCCGCGCCAGTCAGAATGGGGGCGGCCGGGAGCCCCGCAAGAACCACGTGTACGGCGAGCGGAAGCCGGGGCCTGGCGAGGGGCTGCCCAAGGTGTGCCTGGCTCAGCTGCCGCAGCAGCCGTCTCTGCACTACGCCAAGCCCTCGCCCTTCTTCATGGACCCCATCTACAGCAGGGTAGAAAAGCGGAAGGTGACGGACCCCGTGGGTGTCCTGAAGGAGAAGTACCTGCGGCCGCCCTCGCTGCTCTTCCACCCCCAGATGTCAGCCATCGAGACCATGACAGAGAAGCTGGAAAGCTTTGCGGCCATGAAAACGGACTCGGGCGGCTCCCTGCAGCCCCTACCCCACCACCCCTTCAGCTTCCGGTCCCCACCCTCAACGCTCTCGGACCCCATCCTCAGGAAGGGCAAGGAGCGGTACACATGCAGGTACTGTGGCAAGATCTTCCCCAGATCGGCCAACCTCACCAGACACCTGAGGACGCACACCGGGGAGCAGCCATACAGGTGCAAGTACTGCGACCGCTCCTTCAGCATCTCCTCCAACCTGCAGCGGCACGTGCGCAACATCCACAACAAGGAGAAGCCCTTCAAGTGCCACCTGTGCAACCGCTGCTTCGGCCAGCAGACCAACCTGGACCGGCACCTGAAGAAGCACGAGCACGAGGCCGCGCCAGCGGGCCAGCACCCCGGGGTCCCCACCAACCACCTGGGCACCAGCGCCTCCTCCCCCACCTCCGAGTCGGACAACCACGCACTTTTAGATGAGAAAGAAGACTCCTATTTCTCTGAGATCAGAAACTTCATTGCCAACAGTGAGATGAGCCAGGCGTCAACGCGGACAGACAAACGGCCGGAGATCCAGGAGCTGGATGTCGACCCCCAGTGTCCAGGCCTGGCCAGCGAGAAGCCGGAGGACGTGGAGGAGGAGGAGGAGGAGGACCTTGAGGAGGATGAGGAGGACAGCCTGGCGGGGAAGTCCCAGGATGAGGCCGTGTGCCCCACACCTGAGCCCCAGGGCGTCTATGAGGACGAGGAGGATGAGGAGCCACCCACTGCCCTGGCCGTGGGCTTCGACCACACCCGAAGGTGTGTTGAGGAGCGAGAAGGCGGCCTGTTAGCCTTGGAGCAGACGCCGACCTTTGGGAAGGGGCTGGACCTCCGCAGAGCAGCTGAGGAAGCATTTGAAGTTAAAGATGTGCTTAATTCCACCTTAGATTCTGAGGCTTTAAAACAGACCCTGTACAGGCAGGCTAAGAACCAGGCGTATGCAATGATGCTGTCCCTCTCCGAGGACGCGCCCCTCCACGCCCCTGCCCAGAGCTCGCTGGGCGCTTGGCTGAACATAACAGGAGCCTCGTCAGAGTCTGGAGCCTTCAACCCCATCAACCACCTCTGA

Related Sequences

XP_004863836.1 Protein

Prdm16 PREDICTED: PR domain zinc finger protein 16 isoform X1 [Heterocephalus glaber]

Length: 1269 aa      
>XP_004863836.1
MRSKARARKLAKSDGDVVNNMYEPDPDLLAGQSAEEETEDSILSPIPMGPPSPFPTSEDFTPKEGSPYEAPVYIPEDIPIPPDLELRESSIPGAGLGIWAKRKMEVGERFGPYMLAPRAALKEADFGWEPMLTATEVSSQEGCIKKISEDLGSEKFCVDASQVGAGSWLKYIRVACSCDNQNLTMCQINEQIYYKVIKDIEPGEELLVHVKEGAYSLRAVPPGLDEGPTFRCEECDELFQCKLDLRRHKKYACSSAGAALFEGLGDELKPEGLGGGQAHECKDCERMFPNKYSLEQHMIVHTEEREYKCDQCPKAFNWKSNLIRHQMSHDSGKRFECENCVKVFTDPSNLQRHIRSQHVGARAHACPDCGKTFATSSGLKQHKHIHSTVKPFICEVCHKSYTQFSNLCRHKRMHADCRTQIKCKDCGQMFSTTSSLNKHRRFCEGKNHYTPGGLFTPGLPLTPSPMMDKAKPSPSLNHAGLAFSEYFPSRPQPGGLPFSAAPPAFPALTPGFPGIFPPSLYPRPPLLPPTPLLKSPLNHTQDAKLPSPLGNPALPLLSAVSNSSQGGTAGTGPEEKFESHLEDVFTDKAKARSPDMSDGSDFEDINTTTGTDLDTTTGTGSDLDSDVDSDRDRAKDDGGKPERGGGSAAPGAASMAEAPVFYAQHSFFPPPEEQLLAASGAPGDSIKAIASIAEKYFGPGFVGMQEKKLGSLPYHSVFPFQVLPNFPHSLYSFTDRALAHNLLVKAEPKSPRDALKVGGPSAECPFDLTTKPKETKPTLPTPKAPSAPVSGEEQPLDLSIGSRARASQNGGGREPRKNHVYGERKPGPGEGLPKVCLAQLPQQPSLHYAKPSPFFMDPIYSRVEKRKVTDPVGVLKEKYLRPPSLLFHPQMSAIETMTEKLESFAAMKTDSGGSLQPLPHHPFSFRSPPSTLSDPILRKGKERYTCRYCGKIFPRSANLTRHLRTHTGEQPYRCKYCDRSFSISSNLQRHVRNIHNKEKPFKCHLCNRCFGQQTNLDRHLKKHEHEAAPAGQHPGVPTNHLGTSASSPTSESDNHALLDEKEDSYFSEIRNFIANSEMSQASTRTDKRPEIQELDVDPQCPGLASEKPEDVEEEEEEDLEEDEEDSLAGKSQDEAVCPTPEPQGVYEDEEDEEPPTALAVGFDHTRRCVEEREGGLLALEQTPTFGKGLDLRRAAEEAFEVKDVLNSTLDSEALKQTLYRQAKNQAYAMMLSLSEDAPLHAPAQSSLGAWLNITGASSESGAFNPINHL