Details from NCBI annotation

Gene Symbol Lrrc47
Gene Name leucine rich repeat containing 47
Entrez Gene ID 101715326

Database interlinks

Part of NW_004624818.1 (Scaffold)

For more information consult the page for NW_004624818.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LRRC47 ENSCPOG00000014931 (Guinea pig)

Gene Details

leucine rich repeat containing 47

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013455, Guinea pig)

Protein Percentage 90.0%
CDS Percentage 87.59%
Ka/Ks Ratio 0.05468 (Ka = 0.0481, Ks = 0.8794)

LRRC47 ENSG00000130764 (Human)

Gene Details

leucine rich repeat containing 47

External Links

Gene Match (Ensembl Protein ID: ENSP00000367498, Human)

Protein Percentage 87.78%
CDS Percentage 85.26%
Ka/Ks Ratio 0.07409 (Ka = 0.0618, Ks = 0.8339)

Lrrc47 ENSMUSG00000029028 (Mouse)

Gene Details

leucine rich repeat containing 47

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000030894, Mouse)

Protein Percentage 85.15%
CDS Percentage 83.42%
Ka/Ks Ratio 0.0776 (Ka = 0.0797, Ks = 1.027)

Lrrc47 ENSRNOG00000024796 (Rat)

Gene Details

leucine rich repeat containing 47 (Lrrc47), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000036336, Rat)

Protein Percentage 85.49%
CDS Percentage 83.07%
Ka/Ks Ratio 0.07807 (Ka = 0.08, Ks = 1.0243)

Genome Location

Sequence Coding sequence

Length: 1746 bp    Location: 6741057..6750885   Strand: +
>XM_004863755.1
ATGGCGGCGGCAGCGGTGTCCGAGGCCTGGCCCGAGCTCGAGCTGGCGGAGCGCGAGCGGCGGCGCGAGCTGCTGCTGACGGGTCCCAGACTGGAGGAGCGGGTGCGGGCGGCGGGCGGGCGCCTGCCGCCGCGGCTCTTCACGCTGCCGCTGCTGCACTACCTGGAGGTGAGCGGCTGCGGCAGCCTCCGCGCGCCGGGGCCCGGCTTGGCGCAGGGGCTGCCACAGCTGCATAGCCTGGTACTGCGCGGCAACGCTCTGGGGCCCGGCCTGAGCCCCGAGCTGGGGCCGCTGCTGGCGCTGCGCGTGCTCGATCTGTCCGGCAATGAGCTGGAAGCGCTGCCCCCGGGCCAGGGCCTGGGCCCCGCCGAGCCGCCCGGCCTCCCGCAGCTGCAGAGCCTCAACCTCAGCGGCAACCGGCTGCGCGAGCTGCCCGCCGACCTGGCGCTCTGCGCCCCGCGCCTGCAAAGCCTGAACCTCACCGGCAACCTCCTGGACGCCTTCCCCGCAGAGCTCTTCCGCCCCGGCGCTCTTCCGCTGCTCAGTGAGCTGGCGGCCGCCGACAACCGCCTGCGGGAGCTCAGCCCCAACATCGCTCACCTGGCCTCGCTCAAGACCCTGGACCTCTCCAACAACCAGCTGAGCGAGATCCCAGCCGAGCTGGCGGACTGCCCCAAGCTCAAGGAGATCAACTTCCGGGGCAACAAGCTGCGGGACAAGCGCCTGGAGAAGATGGTCAGCGGCTGCCAGCCCCGGTCCATCCTGGAGTACCTGCGCACCGGGGGCCGGGGCTCCCGGGGCCGGGCCCGGGCCGATGGCCCGGAGAAGGAAGATGCCCGGAAGAAGAGGAGGGAGCGGAAGCAGAGGCGGGAGAGCGGCGAGGCAGAGGACGACGTGGCGGATGCAGCCAAGCTGCTGCTCAGGGTCTTGCACGTCTCTGACAACCCCGCGCCCCTGACGATCAGAGTGAACCCCGAAGTCAGGGACGTGCGGCCGTACATCGTGGGGGCCGTCGTGCGAGGCATGGACCTGCAGCCGGGGAACACACTCAAGCGCTTCCTCGCCTCCCAGACCAAGCTCCATGATGAGCTCTGCGAGAAGAGGACGGCGGCCACCATCGCCACTCACGACCTCCGCGCTGTGCGAGGGCCCCTGCTGTACACAGCCCGGCCACCCCAGGACCTCAAGATTGTGCCCTTGGGGCGGAAGGAGGCCAAGGCCAATGAGCTGGTGCGGCAGCTGCAGCTGGAAGCCGAGGAGCAGAGAAAGCAGAAGAAGAGGCAGAGCGTCTCTGGGCTGCACAGGTACCTGCACCTGCTGGACAGCAAGGAAAGTTACCCTTGTCTCGTGGACGCAGCCGGAGATGTGATTTCCTTCCCCCCAATAACGAACAGTGAGAAGACAAAGATTAAGAAAAGCACGTGTGATTTGTTCTTGGAAGTTACCAGTGCCACAAGCCTGAAGATCTGTAAAGACATCATGGACACCCTCCTCCTGAAAATGGCAGAAATGAACAAGCACACTCTAGAAAACAAAGAGGAAGGGTCACTCTCCTACACAGAGGCTGACGCTGTTTCCGCACAACTTCCCGACTCCCTCAGGATCCCAAGTGCTGGGAAGGGTGTACAGTGCCCCCTGGTGGTGGAGCAGGTCCGCGTGGTGGACGCGGAGGGCGGCCTGAGGGTCGTGTACCCCTCCAAGGCCGACCTAGCCGCTGTCCCCCCACATGTGACCGTGGTTCGCTGA

Related Sequences

XP_004863812.1 Protein

Lrrc47 PREDICTED: leucine-rich repeat-containing protein 47 [Heterocephalus glaber]

Length: 581 aa      View alignments
>XP_004863812.1
MAAAAVSEAWPELELAERERRRELLLTGPRLEERVRAAGGRLPPRLFTLPLLHYLEVSGCGSLRAPGPGLAQGLPQLHSLVLRGNALGPGLSPELGPLLALRVLDLSGNELEALPPGQGLGPAEPPGLPQLQSLNLSGNRLRELPADLALCAPRLQSLNLTGNLLDAFPAELFRPGALPLLSELAAADNRLRELSPNIAHLASLKTLDLSNNQLSEIPAELADCPKLKEINFRGNKLRDKRLEKMVSGCQPRSILEYLRTGGRGSRGRARADGPEKEDARKKRRERKQRRESGEAEDDVADAAKLLLRVLHVSDNPAPLTIRVNPEVRDVRPYIVGAVVRGMDLQPGNTLKRFLASQTKLHDELCEKRTAATIATHDLRAVRGPLLYTARPPQDLKIVPLGRKEAKANELVRQLQLEAEEQRKQKKRQSVSGLHRYLHLLDSKESYPCLVDAAGDVISFPPITNSEKTKIKKSTCDLFLEVTSATSLKICKDIMDTLLLKMAEMNKHTLENKEEGSLSYTEADAVSAQLPDSLRIPSAGKGVQCPLVVEQVRVVDAEGGLRVVYPSKADLAAVPPHVTVVR