Sequence details NCBI ID: XM_004863736.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Chd5
Gene Name chromodomain helicase DNA binding protein 5, transcript variant X5
Entrez Gene ID 101708745

Database interlinks

Part of NW_004624818.1 (Scaffold)

For more information consult the page for NW_004624818.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CHD5 ENSCPOG00000025080 (Guinea pig)

Gene Details

chromodomain helicase DNA binding protein 5

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000020779, Guinea pig)

Protein Percentage 92.92%
CDS Percentage 90.19%
Ka/Ks Ratio 0.0604 (Ka = 0.0414, Ks = 0.6846)

CHD5 ENSG00000116254 (Human)

Gene Details

chromodomain helicase DNA binding protein 5

External Links

Gene Match (Ensembl Protein ID: ENSP00000262450, Human)

Protein Percentage 95.55%
CDS Percentage 91.18%
Ka/Ks Ratio 0.025 (Ka = 0.0194, Ks = 0.7778)

Chd5 ENSMUSG00000005045 (Mouse)

Gene Details

chromodomain helicase DNA binding protein 5

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000030775, Mouse)

Protein Percentage 95.02%
CDS Percentage 88.87%
Ka/Ks Ratio 0.02179 (Ka = 0.0224, Ks = 1.0267)

Chd5 ENSRNOG00000011268 (Rat)

Gene Details

chromodomain helicase DNA binding protein 5 (Chd5), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000024732, Rat)

Protein Percentage 95.22%
CDS Percentage 89.06%
Ka/Ks Ratio 0.02152 (Ka = 0.022, Ks = 1.0239)

Genome Location

Sequence Coding sequence

Length: 5862 bp    Location: 5203256..5248624   Strand: +
Raw sequence   
>XM_004863736.1
ATGCGGGGCCCGCTGGGCACCGAGGAGGCGCTGCCGCGGCTGTTCGCCGAGGAGATGGAGAACGAGGACGAGATGTCAGAGGAAGAAGATGGGGGCCTGGAAGGCTTCGATGACTTTTTCCCTACGGAGCCCATGAGCCTCCCCAAGAAGAAGAAAGCTAAGAAGCTGAAGGACAGCAAGTCCAAGGGGAAGCGGAAGAAGAAAGAGGGGAGCAATGACGAGCTGTCGGCCAATGACGAGGATCTGGAGGAGAGGTCGGAGAGTGAGGGGAGCGACTACTCCCCCAACAAGAAGAAGAAGAAGAAGCTCAAGGACAAGAAGGAGAAAAAAGCCAAGCGGAGAAAGAAGGACGAAGATGAGGAGGACAATGAAGACGGGTGCTTAAAGGAGCCCAAGTCCTCGGGGCAGCTCATGGCTGAGTGGGGCCTGGACGACGTGGACTACCTGTTCTCAGAGGAGGACTACCACACACTGACCAACTACAAGGCCTTCAGCCAGTTCCTCCGGCCGCTCATTGCCAAGAAGAACCCGAAGATCCCCATGTCCAAAATGATGACCGTGCTGGGGGCCAAGTGGCGGGAGTTCAGCGCCAACAACCCCTTGAAGGGCAGCTCCGCGGTGGCGGCAGCAGCGGCCGTGGCTGCAGCTGTGGAGACGGTCATCATCGCGCCTCCGCTGGCCGTCAGCCCCCAGCCGGTGCCCCAGCCTGTGCCCCTCCGCAAGGCCAAGACCAAAGAGGGCAAGGGGCCCGGAGTGAGGAAGAAGATGAAAGGCCCCAAAGACGGGAAGAAGAAGGGGAAGGGCAAGAAGGTGGCCGGGCTCAAGTTCCGCTTCGGGGGCATCAGCAACAAGAGGAAGAAAGGCTCCTCGAGTGAGGAGGACGAGCGGGAGGAGTCGGACTTGGACAGCGCCAGCATCCACAGCTCCTCAGTGCGCTCCGAGTGCTCTGCAGCCTTGGGCAAAAAGAGCAAGAGGAGGCGCAAGAAGAAGAGAATTGATGATGGTGACGGCTACGAGACTGACCACCAGGATTACTGCGAGGTGTGCCAGCAGGGCGGGGAGATCATCCTGTGTGACACCTGCCCGCGGGCCTACCACCTGGTGTGCCTGGACCCTGAGCTGGAGAAGGCTCCTGAGGGCAAGTGGAGCTGCCCGCACTGTGAGAAGGAAGGCATCCAGTGGGAGCCGAAGGATGACGACGACGAGGAGGAGGAGCCCGGCTGTGAGGAGGAGGAGGACGACCACATGGAGTTCTGCCGCGTGTGCAAGGATGGCGGCGAGCTGCTCTGCTGCGACGCCTGCCCGTCCTCCTACCACCTGCACTGCCTCAACCCGCCGCTGCCTGAGATTCCAAATGGTGAATGGCTCTGCCCGCGCTGTACTTGTCCCCCACTGAAGGGCAAAGTCCAGCGGATTCTACACTGGAGGTGGACCGAGCCCCCGGCACCCTTCATGGTTGGGCTGCCGGGACCGGACGTGGAGCCAGGTGTGCCTCCGCCCAAGCCACTGGAGGGCATCCCGGAGAGGGAGTTCTTTGTCAAGTGGGCTGGGCTGTCCTACTGGCACTGCTCCTGGGTGAAGGAGCTGCAGCTGGAGCTGTACCACACCGTGATGTACCGCAACTACCAAAGAAAGAACGACATGGACGAGCCGCCACCCTTCGACTACGGCTCTGGCGACGAGGATGGCAAGAGTGAGAAGAGGAAGAACAAGGACCCCCTCTATGCCAAGATGGAGGAGCGCTTCTACCGCTACGGCATCAAGCCCGAGTGGATGATGGTCCACCGCATCCTGAACCACAGCTTCGACAAGAAGGGGGACGTGCACTACCTGATCAAATGGAAAGACCTGCCCTACGACCAGTGCACCTGGGAGATCGACGACATCGACATTCCCTACTATGACAACCTGAAGCAGGCCTACTGGGGCCACAGGGAGCTGATGCTGGGGGAGGACACCCGGCTGCCCAAGCGGCTCATCAAGAAGGGCAAGAAGCTGAAGGACGACAAACAAGAGAAGCCGCCGGACACTCCCATCGTGGACCCCACCGTCAAGTTCGACAAGCAGCCCTGGTACATCGACGCCACGGGCGGCACACTGCACCCGTACCAGCTGGAGGGCCTCAACTGGCTGCGCTTCTCCTGGGCGCAGGGCACCGACACCATCCTGGCCGATGAGATGGGCCTGGGCAAGACAGTGCAGACCATCGTGTTCCTCTACTCCCTGTACAAGGAGGGCCACTCCAAGGGGCCCTACCTGGTCAGCGCGCCCCTGTCCACCATCATCAACTGGGAGCGCGAGTTTGAGATGTGGGCGCCCGACTTCTACGTGGTCACCTACACGGGGGACAAGGAGAGCCGCTCCGTGATCCGTGAGAACGAGTTCTCCTTCGAGGACAACGCCATTCGGAGTGGGAAGAAGGTGTTCCGCATGAAGAAAGAAGTGCAGATCAAGTTCCACGTCCTGCTCACCTCGTACGAGCTCATCACCATCGACCAGGCCATCCTGGGCTCCATCGAGTGGGCCTGCCTCGTGGTGGACGAGGCCCACCGGCTTAAGAACAACCAGTCCAAGTTCTTCAGGGTCCTGAACAGCTACAAGATCGACTACAAGCTGCTGCTGACGGGGACCCCCCTTCAGAACAACCTGGAGGAGCTCTTCCACCTACTCAACTTCCTGACACCGGAGCGGTTCAACAACCTGGAGGGCTTCCTGGAGGAGTTTGCGGACATCTCCAAGGAGGACCAGATCAAGAAGCTGCACGACCTGCTGGGGCCACACATGCTGCGGCGGCTCAAGGCGGACGTGTTCAAGAACATGCCGGCCAAGACTGAGCTCATTGTGCGTGTGGAGCTGAGCCAGATGCAGAAGAAGTACTACAAGTTTATCCTCACTCGCAACTTCGAGGCGCTGAACTCCAAGGGGGGTGGGAACCAGGTGTCGCTGCTGAACATCATGATGGACCTGAAGAAGTGCTGCAACCACCCCTACCTCTTCCCCGTGGCCGCTGTGGAGGCCCCTGTCCTGCCCAACGGCTCCTACGATGGCAGCTCCCTGGTCAAGTCCTCAGGGAAACTCATGTTGCTGCAGAAGATGCTGAAGAAACTGCGGGATGAGGGGCACCGCGTGCTCATCTTCTCCCAGATGACCAAGATGCTGGACCTTCTGGAGGACTTCCTGGAGTATGAGGGTTATAAGTATGAGCGGATTGACGGTGGCATCACTGGGGGTCTCCGGCAGGAGGCGATCGACAGATTCAACGCCCCTGGGGCCCAGCAGTTCTGCTTCCTCCTCTCCACCCGTGCGGGTGGCCTGGGCATCAACCTGGCCACAGCAGACACAGTCATCATCTACGACTCGGACTGGAACCCGCACAATGATATCCAGGCCTTCAGCCGTGCCCACCGCATCGGGCAGAACAAGAAGGTGATGATCTACCGCTTCGTGACACGGGCCTCGGTGGAGGAGCGCATCACGCAGGTGGCCAAGCGCAAGATGATGCTGACCCACCTGGTGGTGCGGCCCGGCCTCGGCTCCAAGTCGGGCTCCATGACCAAACAGGAGCTGGACGACATCCTCAAGTTCGGCACCGAGGAGCTGTTCAAGGACGACGTGGAGGGCATGATGTCCCAGGGCCAGAGGCCGGCCACGCCCATCCCCGATGTGCAGTCCTCCAAGGGTGGCACCCTGGCGGCCGGCCTGAAGAAGAAGCACGGTAGCACGCCTCCAGGCGACAACAAGGACGTGGAGGACAGCAGCGTGATCCACTATGATGATGCAGCCATCTCTAAGCTGCTGGACCGGAACCAGGACGCTACGGACGACACGGAGCTACAGAACATGAACGAGTACCTGAGCTCCTTCAAGGTGGCGCAGTACGTGGTTCGCGAGGAGGACGGCGTGGAGGAGGTGGAGCGGGAGGTGATCAAGCAGGAGGAGAACGTGGACCCTGACTACTGGGAGAAGCTGCTGCGCCACCACTACGAGCAGCAGCAGGAGGACCTGGCCCGGAACCTGGGCAAGGGCAAGCGCATCCGGAAGCAGGTCAACTACAACGACGCCTCCCAGGAGGACCAAGAGTGGCAGGATGAGCTCTCGGACAACCAGTCTGAGTATTCCATTGGCTCTGAGGACGAGGACGAGGACTTCGAGGAGCGGCCAGAGGGCCAGAGTGGACGGCGACAGTCCAGGAGGCAGCTCAAGAGTGACAGGGACAAGCCCCTGCCACCTCTCCTTGCTCGAGTCGGTGGCAACATCGAGGTGCTGGGCTTCAATGCGCGGCAGCGGAAGGCCTTCCTGAACGCCATCATGCGCTGGGGCATGCCGCCCCAGGATGCCTTCAACTCCCACTGGCTTGTGCGGGACCTGCGCGGGAAGAGTGAGAAGGAGTTCAGAGCCTATGTGTCCCTCTTCATGCGACACCTGTGCGAACCTGGGGCCGATGGCGCCGAGACCTTCGCGGACGGTGTGCCGAGGGAGGGGCTGTCTCGGCAGCACGTGCTCACGCGCATCGGGGTCATGTCGCTGGTTAGGAAGAAGGTTCAAGAGTTTGAACACGTCAATGGGAAGTACAGCACCCCGGACCTGGTCCCCGAGGGGCCCGAGGGCAAGAAGCCGGGCGAGGTCATCTCAGACCCCAACACACCTGTGCCTGCCAGCCCTGCCCACCTGCCACCTGCCCCACTGGGCCTGTCAGACAAAGTGGATGCCCCACTGGGCTACGGAGATGAGAAGGAGCCAGGGCTGCAGAAGCCAAAGAAACCCCTGGAAATCCAGGTCCTGCCAGCTGCCCTGGACAGAGTGGAGGGGGAGGACAAGCAGGAGAGCTTAGACAGCAAGGACAGAGCCCGAGACGAGCGGCCGGAGGAGATGGAGAAGGCACAGGCCTCCCCGGAGCAGCTACCCAAAGAGGAGGCGCCCCTCGAGAAGGAGAAGGCCCCAGACAAGCTGGACCTCAGGCTCAGCCACAGCAGAGCGGACAGTGGGGACTTCAGGCCAGATGACACCAAGGCGGACGAGAAGGAGGCCATCGAGATGCAGCAGAATGGTGACAGAGAGGAAGACGAGGAGGGCAAGAAGGACGACAAGAATGGGAGATTCAAATTCATGTTCAACATTGCGGACGGTGGCTTCACAGAGCTGCACACGCTATGGCAGAACGAGGAGCGGGCTGCAGTGTCCTCGGGAAAAATCTATGACATCTGGCACCGGCGCCATGACTACTGGCTGCTGGCTGGCATCGTGACGCACGGCTATGCCCGCTGGCAGGACATCCAGAACGACCCCAGGTATCTGATCCTCAATGAGCCCTTCAAGTCTGAGATCCACAAGGGCAACTACCTGGAGATGAAGAACAAGTTCCTGGCCCGCAGGTTCAAGCTGCTGGAGCAGGCCCTGGTCATTGAGGAGCAGCTGCGGAGGGCCGCGTACCTCAACATGACCCAGGACCCCAACCACCCGGCCATGGCCCTCAATGCCCGCCTGGCTGAGGTGGAATGCCTGGCTGAGAGCCACCAGCACCTGTCCAAGGAGTCCCTGGCCGGGAACAAGCCGGCCAACGCCGTGCTGCACAAGGTACTGAACCAGCTGGAGGAGCTGCTGAGCGATATGAAGGCGGACGTGACGCGCTTGCCCTCCATGCTGTCCCGCATCCCCCCGGTGGCTGCCCGCCTGCAGATGTCAGAGCGCAGCATCCTGAGCCGCCTGACCAACCGTGCTGGGGACCCCACCATCCAGCAGGGCGCTTTCGGCTCCTCCCAGATGTACAACAGCAACTTTGGGCCCAACTTCCGGGGCCCTGGACCGGGAGGGATTGTGAACTACAACCAGATGCCCCTGGGGCCCTATGTGACCGACATCTAG

Related Sequences

XP_004863793.1 Protein

Chd5 PREDICTED: chromodomain-helicase-DNA-binding protein 5 isoform X5 [Heterocephalus glaber]

Length: 1953 aa      View alignments
>XP_004863793.1
MRGPLGTEEALPRLFAEEMENEDEMSEEEDGGLEGFDDFFPTEPMSLPKKKKAKKLKDSKSKGKRKKKEGSNDELSANDEDLEERSESEGSDYSPNKKKKKKLKDKKEKKAKRRKKDEDEEDNEDGCLKEPKSSGQLMAEWGLDDVDYLFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPLKGSSAVAAAAAVAAAVETVIIAPPLAVSPQPVPQPVPLRKAKTKEGKGPGVRKKMKGPKDGKKKGKGKKVAGLKFRFGGISNKRKKGSSSEEDEREESDLDSASIHSSSVRSECSAALGKKSKRRRKKKRIDDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKDDDDEEEEPGCEEEEDDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWRWTEPPAPFMVGLPGPDVEPGVPPPKPLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPPPFDYGSGDEDGKSEKRKNKDPLYAKMEERFYRYGIKPEWMMVHRILNHSFDKKGDVHYLIKWKDLPYDQCTWEIDDIDIPYYDNLKQAYWGHRELMLGEDTRLPKRLIKKGKKLKDDKQEKPPDTPIVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDDVEGMMSQGQRPATPIPDVQSSKGGTLAAGLKKKHGSTPPGDNKDVEDSSVIHYDDAAISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREVIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDEDEDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHVNGKYSTPDLVPEGPEGKKPGEVISDPNTPVPASPAHLPPAPLGLSDKVDAPLGYGDEKEPGLQKPKKPLEIQVLPAALDRVEGEDKQESLDSKDRARDERPEEMEKAQASPEQLPKEEAPLEKEKAPDKLDLRLSHSRADSGDFRPDDTKADEKEAIEMQQNGDREEDEEGKKDDKNGRFKFMFNIADGGFTELHTLWQNEERAAVSSGKIYDIWHRRHDYWLLAGIVTHGYARWQDIQNDPRYLILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQDPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTNRAGDPTIQQGAFGSSQMYNSNFGPNFRGPGPGGIVNYNQMPLGPYVTDI