Sequence details NCBI ID: XM_004863676.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Slc45a1
Gene Name solute carrier family 45, member 1, transcript variant X2
Entrez Gene ID 101721445

Database interlinks

Part of NW_004624818.1 (Scaffold)

For more information consult the page for NW_004624818.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SLC45A1 ENSCPOG00000014988 (Guinea pig)

Gene Details

solute carrier family 45, member 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013509, Guinea pig)

Protein Percentage 92.39%
CDS Percentage 91.14%
Ka/Ks Ratio 0.07174 (Ka = 0.0354, Ks = 0.4939)

SLC45A1 ENSG00000162426 (Human)

Gene Details

solute carrier family 45, member 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000418096, Human)

Protein Percentage 87.65%
CDS Percentage 86.22%
Ka/Ks Ratio 0.06158 (Ka = 0.0579, Ks = 0.9409)

Slc45a1 ENSMUSG00000039838 (Mouse)

Gene Details

solute carrier family 45, member 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000036774, Mouse)

Protein Percentage 87.45%
CDS Percentage 83.93%
Ka/Ks Ratio 0.0662 (Ka = 0.067, Ks = 1.0117)

Slc45a1 ENSRNOG00000018229 (Rat)

Gene Details

solute carrier family 45, member 1 (Slc45a1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000024581, Rat)

Protein Percentage 87.32%
CDS Percentage 84.96%
Ka/Ks Ratio 0.07305 (Ka = 0.0662, Ks = 0.9059)

Genome Location

Sequence Coding sequence

Length: 2328 bp    Location: 3669085..3654007   Strand: -
Raw sequence   
>XM_004863676.1
ATGAACCCCCCGGCCACCCCTCCGGGAGAGGCACTCTTGCCCAGCGTGGCTCCTCAGGACTTCTGGAGGTCACAGGTCTCGGCTTACTCGGGCTCAGTGACCCGTCACATCAGCCACCGGGCCAACAACTTCAAACGCCACCCCAAGAGGAGGAAGTGCATCCGGCCCTCCCCACCCCCACCCCCCAACACCCCCTGTCCCATTGAGCGGGTGGACTTTGGGGACCTGCACCCCCAGAGGTCCTTCCGGGAGCTGCTCTTCAACGGCTGTGTCCTGTTCGGCATCGAGTTCAGCTATGCCATGGAGACAGCATATGTGACACCTGTGCTGCTGCAGATGGGCCTGCCCGACCAGCTCTACAGCCTGGTGTGGTTCATCAGCCCCATCCTCGGGTTCCTGCTGCAGCCTCTGTTGGGTGCTTGGAGTGACCGGTGTACCTCAAGGTTTGGAAGGAGACGCCCTTTCATTCTTGTCCTGGCGATAGGGGCGCTGCTGGGCCTCTCGCTCCTGCTGAATGGCAGGGACATCGGCGCAGCCCTGGCTGACACCGCCACCAGCCACAAGTGGGGCATCTTGCTGACCGTGTGCGGCGTGGTGCTGATGGACGTCAGCGCCGACTCTGCTGACAACCCCAGCCACGCCTACATGATGGACGTGTGCGGCCCGGCGGACCAGGACCGCGGCCTGAACATCCACGCCCTCCTGGCGGGTCTGGGAGGAGGGTTCGGTTACGTGGTCGGCGGGATCCACTGGGACAGAACCGGCTTTGGGAGAGTGCTGGGGGGCCAGCTCCGCGTCATCTACATCTTCACCGCGGTCACCCTGAGCGTCACCACCGTGCTGACGCTGATCAGCATCCCCGAGCGGCCCCTGCGGCCCCCTGGAGAGAAGAGGCCGGCCCTGAAGAGCCCCAGCCTCGCTCTGCCCCCGTCCCCGCCTGCCCTGCAGGAGGAGGCCGCGGGCGACACTCTCCCCGCCCAGGCAGCCCCCAGCCTGTATGCCAGCTTCTCCACGCCCATCTCCCCACCCAGCCCGCTCACGCCCAAGTATGGCAGCTTCGTCAGCCGGGACAGCTCCCTGACAGGCATCAGCGAGTTCGCGTCCTCCTTCGGCACCTCCAACATAGACAGCGTCCTCATCGACTGCTTCACGGGGGACCCCGACAACTACCTGGCCCTCCCCGGCAGCATCCCCCGACCGCCCATCAGTGTCAGCTTCCCCCGGGCCCCTGAAGGCTTCTATCACCAGGACCGGGGCCTGCTGGACAGGAGGGACAGCAGCCTGGCCTCCAGCGATGGGGACGTGCTGAGGGTGGGCTCCCTGGACGCCCCCAAGCCACAGGCCTCTGGCATCCTGAAGAGACCCCAGACCTTGGCTCTCCCTGATGCAGCCGGGGGAGGCGGCCCTGAAACTAGCAGGAGAAGGAACGTGACCTTCAGCCAACAGGTGGCAAACATCCTGCTCAACGGTGTGAAGTTTGAGAGCGAGCTGACGGGCTCCAGGGAGCAGTGGGAGCAGCCACTGTCCCCGGGCCGCCTGTGCGCCACCATCTGCCACATGCCCAAGGCACTGCGTAACCTGTGTGTCAACCACTTCCTGGGCTGGCTGTCCTTCGAGGGGATGCTGCTCTTCTACACTGACTTCATGGGCGAGGTGGTGTTCCAGGGCGACCCCAAGGCCCCGCACTCGTCTGAGGAGTACCAGAGGTACAGCAGTGGCGTGACCATGGGCTGCTGGGGCATGTGCATCTACGCCTTCAGCGCCGCGCTCTACTCAGGGCTGAGCCAGCGCCCCAGGTCCCAGGGGTGGCGCAGGAGCCCGGCCACTCACTGCCCACCTGCCTGCCCGCCCGCAGCCCTGCTGGAGAAGCTGGAGGGCTGCCTGAGCACCCGCACCCTCTACTTCATCGCCTACCTCGCCTTCGGCCTGGGCACCGGGCTGGCCACGCTGTCCAGGAACCTCTACGTGATCCTGTCGCTCTGCACCACCTACGGGGTCCTGTTCTCCACGCTGTGCACGCTGCCCTACTCGCTGCTCTGCGACTACTACCAGAGCAAGGCGTTTGCAGGATCCGGCACAGATGGGAGCCGGCGCGGAATGGGCATGGACATCTCCCTGCTGAGCTGCCAGTACTTTCTGGCCCAGATCCTGGTCTCCCTGGTCCTGGGGCCACTGACCTTGGCCGTGGGCAGTGCCAGCGGCGTGATGTACTTCTCCAGCCTCATGTCCTTCCTGGGCTGTGTTTACTCCTCCCTGTTCGTCATCTACGAGATCCCCGCTGGGGACGCAGGAGACGAGGAGCACCAGCCCCTCTTGCTGAATGTCTGA

Related Sequences

XP_004863733.1 Protein

Slc45a1 PREDICTED: proton-associated sugar transporter A isoform X2 [Heterocephalus glaber]

Length: 775 aa      View alignments
>XP_004863733.1
MNPPATPPGEALLPSVAPQDFWRSQVSAYSGSVTRHISHRANNFKRHPKRRKCIRPSPPPPPNTPCPIERVDFGDLHPQRSFRELLFNGCVLFGIEFSYAMETAYVTPVLLQMGLPDQLYSLVWFISPILGFLLQPLLGAWSDRCTSRFGRRRPFILVLAIGALLGLSLLLNGRDIGAALADTATSHKWGILLTVCGVVLMDVSADSADNPSHAYMMDVCGPADQDRGLNIHALLAGLGGGFGYVVGGIHWDRTGFGRVLGGQLRVIYIFTAVTLSVTTVLTLISIPERPLRPPGEKRPALKSPSLALPPSPPALQEEAAGDTLPAQAAPSLYASFSTPISPPSPLTPKYGSFVSRDSSLTGISEFASSFGTSNIDSVLIDCFTGDPDNYLALPGSIPRPPISVSFPRAPEGFYHQDRGLLDRRDSSLASSDGDVLRVGSLDAPKPQASGILKRPQTLALPDAAGGGGPETSRRRNVTFSQQVANILLNGVKFESELTGSREQWEQPLSPGRLCATICHMPKALRNLCVNHFLGWLSFEGMLLFYTDFMGEVVFQGDPKAPHSSEEYQRYSSGVTMGCWGMCIYAFSAALYSGLSQRPRSQGWRRSPATHCPPACPPAALLEKLEGCLSTRTLYFIAYLAFGLGTGLATLSRNLYVILSLCTTYGVLFSTLCTLPYSLLCDYYQSKAFAGSGTDGSRRGMGMDISLLSCQYFLAQILVSLVLGPLTLAVGSASGVMYFSSLMSFLGCVYSSLFVIYEIPAGDAGDEEHQPLLLNV