Details from NCBI annotation

Gene Symbol Tardbp
Gene Name TAR DNA binding protein, transcript variant X3
Entrez Gene ID 101697585

Database interlinks

Part of NW_004624818.1 (Scaffold)

For more information consult the page for NW_004624818.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TARDBP ENSCPOG00000011619 (Guinea pig)

Gene Details

TAR DNA binding protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010451, Guinea pig)

Protein Percentage 98.55%
CDS Percentage 93.95%
Ka/Ks Ratio 0.03541 (Ka = 0.0089, Ks = 0.2525)

TARDBP ENSG00000120948 (Human)

Gene Details

TAR DNA binding protein

External Links

Gene Match (Ensembl Protein ID: ENSP00000240185, Human)

Protein Percentage 97.58%
CDS Percentage 91.87%
Ka/Ks Ratio 0.03163 (Ka = 0.0121, Ks = 0.3833)

Tardbp ENSMUSG00000041459 (Mouse)

Gene Details

TAR DNA binding protein

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000081142, Mouse)

Protein Percentage 96.86%
CDS Percentage 92.03%
Ka/Ks Ratio 0.04046 (Ka = 0.0143, Ks = 0.3547)

Genome Location

Sequence Coding sequence

Length: 1245 bp    Location: 1789820..1759497   Strand: -
>XM_004863593.1
ATGTCTGAATATATTCGGGTAACAGAAGATGAGAACGATGAACCCATTGAAATACCAGCAGAAGATGATGGGACAGTACTACTGTCCACAGTTACAGCCCAGTTTCCAGGGGCATGTGGGCTGCGCTACAGGAATCCAGTGTCCCAATGTATGAGAGGCGTCCGTCTGGTTGAAGGAATTCTGCATGCCCCAGATGCTGGCTGGGGAAATCTGGTATATGTTGTCAACTATCCCAAAGATAACAAAAGGAAAATGGATGAGACAGATGCTTCTTCAGCAGTTAAAGTGAAAAGAGCAGTCCAGAAAACATCGGACTTAATAGTGTTGGGTCTTCCGTGGAAAACAACTGAGCAGGATCTAAAAGAATATTTTAGTACCTTTGGAGAAGTTCTTATGGTGCAGGTCAAGAAAGATATTAAAACTGGTCATTCAAAAGGCTTTGGCTTTGTTCGTTTTACGGAATATGAAACCCAGGTGAAAGTAATGTCACAGCGACATATGATAGATGGACGATGGTGTGACTGTAAACTTCCTAATTCTAAGCAAAGTCCGGATGAGCCTTTGAGGAGCAGAAAGGTGTTTGTTGGGCGTTGTACAGAGGACATGACTGCTGATGAGCTTCGGCAGTTCTTCTCTCAGTACGGAGAAGTGGAAGATGTCTTCATTCCCATACCGTTCAGGGCTTTTGCCTTTGTTACCTTTGCAGATGATCAGGTTGCCCAATCTCTTTGTGGAGAGGACTTGATCATTAAAGGAATCAGCGTGCATATATCCAATGCTGAACCTAAGCACAATAGCAATAGACAGTTAGAGAGAAGTGGAAGATTTGGTGGTAATCCGGGTGGCTTTGGGAATCAGGGTGGGTTTGGAAACAGTAGAGGGGGTGGAGCTGGCTTGGGAAACAATCAGGGCAGTAACATGGGTGGGGGGATGAATTTTGGTGCTTTTAGCATTAATCCAGCAATGATGGCTGCAGCCCAGGCCGCGCTGCAGAGCAGCTGGGGTATGATGGGCATGCTTGCCAGTCAGCAGAACCAGTCTGGCCCATCAGGTAATAACCAAAGCCAGGGCAACATGCAGAGGGAGCCAAATCAGGCTTTTGGCTCTGGAAATAACTCTTACAGTGGTTCTAATTCTGGTGCTGCAATTGGTTGGGGATCAGCATCGAATGCAGGGTCAGGCAGTGGTTTTAATGGAGGCTTTGGCTCAAGCATGGATTCTAAGTCTTCTGGCTGGGGAATGTAG

Related Sequences

XP_004863650.1 Protein

Tardbp PREDICTED: TAR DNA-binding protein 43 isoform X3 [Heterocephalus glaber]

Length: 414 aa     
>XP_004863650.1
MSEYIRVTEDENDEPIEIPAEDDGTVLLSTVTAQFPGACGLRYRNPVSQCMRGVRLVEGILHAPDAGWGNLVYVVNYPKDNKRKMDETDASSAVKVKRAVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDIKTGHSKGFGFVRFTEYETQVKVMSQRHMIDGRWCDCKLPNSKQSPDEPLRSRKVFVGRCTEDMTADELRQFFSQYGEVEDVFIPIPFRAFAFVTFADDQVAQSLCGEDLIIKGISVHISNAEPKHNSNRQLERSGRFGGNPGGFGNQGGFGNSRGGGAGLGNNQGSNMGGGMNFGAFSINPAMMAAAQAALQSSWGMMGMLASQQNQSGPSGNNQSQGNMQREPNQAFGSGNNSYSGSNSGAAIGWGSASNAGSGSGFNGGFGSSMDSKSSGWGM