Details from NCBI annotation

Gene Symbol Tnfrsf1b
Gene Name tumor necrosis factor receptor superfamily, member 1B
Entrez Gene ID 101712824

Database interlinks

Part of NW_004624818.1 (Scaffold)

For more information consult the page for NW_004624818.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TNFRSF1B ENSCPOG00000020299 (Guinea pig)

Gene Details

tumor necrosis factor receptor superfamily, member 1B

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000018355, Guinea pig)

Protein Percentage 72.46%
CDS Percentage 79.68%
Ka/Ks Ratio 0.28586 (Ka = 0.1697, Ks = 0.5937)

TNFRSF1B ENSG00000028137 (Human)

Gene Details

tumor necrosis factor receptor superfamily, member 1B

External Links

Gene Match (Ensembl Protein ID: ENSP00000365435, Human)

Protein Percentage 65.32%
CDS Percentage 74.57%
Ka/Ks Ratio 0.32366 (Ka = 0.2392, Ks = 0.7392)

Tnfrsf1b ENSMUSG00000028599 (Mouse)

Gene Details

tumor necrosis factor receptor superfamily, member 1b

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000030336, Mouse)

Protein Percentage 60.14%
CDS Percentage 69.97%
Ka/Ks Ratio 0.31778 (Ka = 0.2975, Ks = 0.9362)

Tnfrsf1b ENSRNOG00000016575 (Rat)

Gene Details

tumor necrosis factor receptor superfamily, member 1b (Tnfrsf1b), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000022478, Rat)

Protein Percentage 57.53%
CDS Percentage 67.72%
Ka/Ks Ratio 0.31012 (Ka = 0.326, Ks = 1.0512)

Genome Location

Sequence Coding sequence

Length: 1344 bp    Location: 922785..895324   Strand: -
>XM_004863540.1
ATGGCGCCCGCAGCGCTGTGGGCCGCGCTTGCCGTCGGACTGCAGCTCTGGGCGGCGGGGTTCGCCGTGCCCGCCCAGGATATGTTCATGCCCTACGCACCGGAATCTGGGACCAAGTGCCAGGTGAAAGAATATTATGAGAATACCGCTGGGATGTGCTGCAGCTTGTGTCAACCTGGCCAGCATGTGAAAGCCTTGTGCACCAAGACCTCGGACACCGTGTGTACCCCTTGCGAGGAGAGCACGTACACCCAGCTCTGGAACTGGCTCTACACGTGCTTAAGCTGCCGCTCCCCCTGCAGCTCTGACCAGGTGGAGATTCAAGCATGCACCCCACAGCAGAACCGCGTTTGCACCTGCAGGCCAGGTCAGTTCTGCATTCTGGGGAGTCCGGACAGCTGCCGGCAGTGCATACCTCTGCGCAAGTGTCCTCCTGGCTTTGGCGTGGTCAAACCAGGAACTGCGAGTTCAGATGTGCATTGCGCCCCCTGTGCCCCAGGCACTTTCTCCAACACCTTGTCTTCCACTGAAGTCTGCAGGCCCCACCGAAAATGCAGCTCCGTGGCCATCCCTGGGAATGCAACTATGGACGCAGCCTGTGCGTTTGTGTCCTCCACCCTGGAAGCAGCCCCGGGCCCAGCCCGCACGCCCTGGTCAGTGTCCCAGAGTGCAGAGCCGGCGGAGCCAACTCCAGGGCCCAGCACAGCTCCAAGCACGGCCTTGCTGCTCCCAGAGGGCCCCAAGCCCCCGACTGGAAAGAGCAAGAACGGCATCTCCCTGCCAATCGGACTGATTGTGGGTCTGACGGCCCTGGGGCTGCTGGTCATCGGACTGGTGAACTGTGTCATCGTGACCCAGAGAAAAAAGAAGCTCTCCTGCCCACATCGAGAAGGCAAGCGGCACCTGCCTGTGGATAAGATCCGGGGTGTGACAGGCCTGGAGCAGCAGCAGCTGCTCACTACTGCGCCCAGCTCCAGCAGTAACTCCCTGGAGAGCTCGGCCAGCACTGCCACCCTGGGCGCGGAGAAGCCCGAGGGGTCCGGGGAGACCCGGGGCACCTTCAGGAGCTCAGAGTCTCCCCCTGGTGGCCATGGGACCCAGGTCAATGTCACCTGCATCGTGAACGTCTGCAGCAGCTCCGACCATGGCTCGCAGTGCTCCTCCCAAGCCACGACGGAGGACCCCAATGCCAGCCTTTCAGGAACCCCAGAGGACGAGCAGGTCCCCTTCTCCCAGGAGGAGCGCCCCTTTCAGTCCTGGCAGGAGACCCCGGAGACTCTGCTGCAAAGCCTGGAGAAACCTCTGCCTTTCTGCGTGCCGGACTCGGGCATGAGGCTCAGTTAA

Related Sequences

XP_004863597.1 Protein

Tnfrsf1b PREDICTED: tumor necrosis factor receptor superfamily member 1B [Heterocephalus glaber]

Length: 447 aa      View alignments
>XP_004863597.1
MAPAALWAALAVGLQLWAAGFAVPAQDMFMPYAPESGTKCQVKEYYENTAGMCCSLCQPGQHVKALCTKTSDTVCTPCEESTYTQLWNWLYTCLSCRSPCSSDQVEIQACTPQQNRVCTCRPGQFCILGSPDSCRQCIPLRKCPPGFGVVKPGTASSDVHCAPCAPGTFSNTLSSTEVCRPHRKCSSVAIPGNATMDAACAFVSSTLEAAPGPARTPWSVSQSAEPAEPTPGPSTAPSTALLLPEGPKPPTGKSKNGISLPIGLIVGLTALGLLVIGLVNCVIVTQRKKKLSCPHREGKRHLPVDKIRGVTGLEQQQLLTTAPSSSSNSLESSASTATLGAEKPEGSGETRGTFRSSESPPGGHGTQVNVTCIVNVCSSSDHGSQCSSQATTEDPNASLSGTPEDEQVPFSQEERPFQSWQETPETLLQSLEKPLPFCVPDSGMRLS