Details from NCBI annotation

Gene Symbol Syt9
Gene Name synaptotagmin IX, transcript variant X1
Entrez Gene ID 101711627

Database interlinks

Part of NW_004624817.1 (Scaffold)

For more information consult the page for NW_004624817.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SYT9 ENSCPOG00000004361 (Guinea pig)

Gene Details

synaptotagmin IX

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003934, Guinea pig)

Protein Percentage 97.54%
CDS Percentage 95.7%
Ka/Ks Ratio 0.08533 (Ka = 0.0116, Ks = 0.1364)

SYT9 ENSG00000170743 (Human)

Gene Details

synaptotagmin IX

External Links

Gene Match (Ensembl Protein ID: ENSP00000324419, Human)

Protein Percentage 97.56%
CDS Percentage 94.77%
Ka/Ks Ratio 0.06773 (Ka = 0.0124, Ks = 0.1831)

Syt9 ENSMUSG00000062542 (Mouse)

Gene Details

synaptotagmin IX

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000073164, Mouse)

Protein Percentage 96.54%
CDS Percentage 91.17%
Ka/Ks Ratio 0.04207 (Ka = 0.0161, Ks = 0.3828)

Syt9 ENSRNOG00000019613 (Rat)

Gene Details

synaptotagmin IX (Syt9), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000026607, Rat)

Protein Percentage 96.33%
CDS Percentage 90.7%
Ka/Ks Ratio 0.03985 (Ka = 0.0168, Ks = 0.4222)

Genome Location

Sequence Coding sequence

Length: 1476 bp    Location: 8996980..9166331   Strand: +
>XM_004863422.1
ATGCCCGGGGCCAGGGACGCCCTCTGTCACCAGGCGCTGCAGCTGCTGGCCGAGCTCTGTGCCCATGGGGCCCTGGAGCACGACAGCTGCCAAGATTTCATCTACCACCTGCGGGACCGTACCAGACCCCGGCTCCGCGACCCAGATATCTCAGTGAGCCTGCTGACCCTCGTGGTCACTGCCTGTGGTCTTGCCCTCTTTGGTGTGTCTCTCTTCGTGTCTTGGAAACTCTGCTGGGTTCCATGGCGAGAACGAGGCCTGTTCTCTGGTAGCAAAGACAACAACCAGGAGCCTCTTAACTACACGGACACAGAGACCAATGAGCAAGAGAACAGTGAGGACTTCATAGACCCACCCACACCCTGCCTTGACTCCTCCATGAAGATAAGCCACACCTCCCCGGACATTCCCCTCTCCACCCAGCCCGGGGTCCAGGAGAATTGTGCCCATGGGGTCCGCATGCAGCGCCAAGTCACAGAGCCAACCTCGTCAGCTCGGCATAATTCAATCCGAAGACAACTCAACCTGTCAAACCCAGACTTCAACATCCAGCAGCTTCAAAAACAGGAACAGTTGACTGGAATTGGTAGAATTAAACCAGAGTTATATAAACAGAGGTCATTGGATAATGATGACGGGAGAAGGAGTAACAGCAAAGCTTGTGGGAAACTGAACTTCATTTTAAAATATGACTGTGACTTAGAGCAGCTCATAGTGAAGATTCACAAAGCTATCAATTTGCCTGCCAAGGACTTTTCTGGGACTTCAGATCCTTATGTGAAAATCTACTTGCTTCCTGATCGGAAAACAAAGCACCAGACTAAAGTTCACAGAAAGACCCTGAACCCTGTGTTTGATGAAGTGTTTTTATTTCCAGTTCCCTACAGTGATCTTGAAGCTCGGAAGCTTCACTTCTCCGTGTATGACTTTGACAGATTCTCTCGCCACGACTTAATTGGCCAAGTGGTAGTGGATCACTTCTTAGACTTGGCTGATTTCCCCCGGGAGTGCATCCTTTGGAAGGATATCGAATATGTCACCAATGACAACGTAGATCTTGGAGAGCTCATGTTTTCCCTCTGCTATCTTCCCACGGCTGGCAGGCTGACCATTACCATCATAAAAGCAAGGAATTTAAAGGCAATGGACATAACAGGAGCATCAGATCCCTACGTGAAAGTCTCCCTGATGTGTGACAGCAGACGACTGAAGAAGAGGAAAACATCCACCAAGAGGAACACGCTGAATCCTGTTTACAATGAAGCCATAGTCTTTGATGTCCCTCCTGAGAACATTGACCAAATCCACTTGTCTATAGCAGTCATGGACTATGACCGTGTAGGTCACAATGAGATCATCGGTGTGTGTCAAGTAGGCAACGAGGCTGAGAGGCTGGGCAGAGACCACTGGAGTGAAATGCTGTCATATCCTCGGAAGCCCATCGCACACTGGCACTCCTTGGTAGAGAAACGATGA

Related Sequences

XP_004863479.1 Protein

Syt9 PREDICTED: synaptotagmin-9 isoform X1 [Heterocephalus glaber]

Length: 491 aa      View alignments
>XP_004863479.1
MPGARDALCHQALQLLAELCAHGALEHDSCQDFIYHLRDRTRPRLRDPDISVSLLTLVVTACGLALFGVSLFVSWKLCWVPWRERGLFSGSKDNNQEPLNYTDTETNEQENSEDFIDPPTPCLDSSMKISHTSPDIPLSTQPGVQENCAHGVRMQRQVTEPTSSARHNSIRRQLNLSNPDFNIQQLQKQEQLTGIGRIKPELYKQRSLDNDDGRRSNSKACGKLNFILKYDCDLEQLIVKIHKAINLPAKDFSGTSDPYVKIYLLPDRKTKHQTKVHRKTLNPVFDEVFLFPVPYSDLEARKLHFSVYDFDRFSRHDLIGQVVVDHFLDLADFPRECILWKDIEYVTNDNVDLGELMFSLCYLPTAGRLTITIIKARNLKAMDITGASDPYVKVSLMCDSRRLKKRKTSTKRNTLNPVYNEAIVFDVPPENIDQIHLSIAVMDYDRVGHNEIIGVCQVGNEAERLGRDHWSEMLSYPRKPIAHWHSLVEKR