Details from NCBI annotation

Gene Symbol Trim3
Gene Name tripartite motif containing 3, transcript variant X7
Entrez Gene ID 101702043

Database interlinks

Part of NW_004624817.1 (Scaffold)

For more information consult the page for NW_004624817.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TRIM3 ENSCPOG00000001032 (Guinea pig)

Gene Details

tripartite motif containing 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000930, Guinea pig)

Protein Percentage 99.46%
CDS Percentage 94.04%
Ka/Ks Ratio 0.00841 (Ka = 0.0024, Ks = 0.2906)

TRIM3 ENSG00000110171 (Human)

Gene Details

tripartite motif containing 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000433102, Human)

Protein Percentage 98.92%
CDS Percentage 92.29%
Ka/Ks Ratio 0.01239 (Ka = 0.0049, Ks = 0.3947)

Trim3 ENSMUSG00000036989 (Mouse)

Gene Details

tripartite motif-containing 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000053384, Mouse)

Protein Percentage 98.66%
CDS Percentage 89.61%
Ka/Ks Ratio 0.01259 (Ka = 0.0069, Ks = 0.5504)

Trim3 ENSRNOG00000018356 (Rat)

Gene Details

tripartite motif-containing 3 (Trim3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000024850, Rat)

Protein Percentage 98.79%
CDS Percentage 89.43%
Ka/Ks Ratio 0.01112 (Ka = 0.0063, Ks = 0.5693)

Genome Location

Sequence Coding sequence

Length: 2235 bp    Location: 7991411..7965976   Strand: -
>XM_004863399.1
ATGGCAAAGAGGGAGGACAGCCCTGGCCCAGAAGTACAGCCAATGGACAAGCAGTTCCTGGTGTGCAGCATCTGCCTGGATCGGTACCGGTGCCCCAAGGTTCTGCCTTGCCTGCATACCTTCTGTGAGAGATGCCTCCAGAACTACATCCCTGCCCAGAGCCTGACACTGTCCTGTCCAGTGTGCCGGCAGACGTCCATCCTCCCCGAGCAGGGTGTCTCAGCACTGCAGAACAATTTCTTCATCAGCAGCCTCATGGAGGCCATGCAGCAGGTGCCCGACGGGGCCCGCGACCCTGAGGACCCTCACCCCCTCAGTGCAGTGGCCGGCCGCCCTCTCTCCTGCCCCAACCATGAAGGCAAGACGATGGAGTTTTACTGTGAGGCCTGTGAGACGGCCATGTGCGGCGAGTGCCGCGCAGGGGAGCACCGGGAGCACGGCACGGTGCTGCTGCGGGATGTGGTGGAGCAGCACAAGGCGGCCCTGCAGCGCCAGCTCGAGGCTGTGCGTGGCCGGCTGCCACAGCTGTCTGCAGCCATCGCCTTAGTGGGGGGCATCAGCCAGCAGCTGCAGGAGCGCAAGGCAGAGGCCCTGGCCCAGATCAGCGCAGCCTTCGAGGACCTGGAGCAAGCGCTACAGCAGCGCAAGCAGGCTCTGGTCAGCGACTTGGAGAGCATTTGCGGGGCCAAGCAGAAGGTATTGCAGACCCAGTTAGATACACTGCGCCAGGGTCAGGAACATATCGGCAGCAGCTGCAGCTTCGCAGAGCAGGCGCTCCGCCTGGGCTCGGCCCCGGAGGTGCTGCTGGTGCGAAAGCACATGCGAGAGAGGCTGTCAGCCCTGGCGGCTCAGGCCTTCCCGGAGCGGCCGCATGAGAACGCACAGCTGGAACTGGTTCTTGAGGTGGACGGGCTGCGGCGGTCGGTGCTCAATCTGGGCGCGCTGCTCACCACCAGCGCCACCGCACACGAGACGGTGGCCACGGGTGAGGGCTTGCGCCAGGCGCTGGTGGGCCAGCCCGCCTCGCTCACGGTCACTACCAAAGACAAGGACGGGCGGCTGGTGCGCACGGGCAGCGCCGAGCTTCGCGCAGAGATCACGGGCCCCGACGGCACGCGCCTCCCGGTGCCAGTGGTGGACCACAAGAATGGCACGTACGAACTGGTGTACACGGCGCGCACAGAGGGCGAGCTGCTCCTCACTGTGCTCCTCTACGGACAGCCGGTGCGCGGCAGCCCCTTCCGGGTACGTGCCCTGCGTCCTGGGGACCTGCCACCTTCCCCGGACGACGTGAAGCGCCGGGTCAAGTCCCCAGGCGGTCCAGGCAGCCATGTGCGCCAGAAGGCGGTGCGTAGGCCTAGCTCCATGTACAGCACAGGTGGCAAACGGAAGGACAACCCGATTGAGGACGAGCTCGTCTTCCGTGTTGGCAGTCGAGGAAGGGAGAAGGGTGAATTCACCAATTTGCAAGGTGTATCTGCAGCTAGCAGTGGCCGTATAGTGGTAGCAGATAGCAACAACCAGTGTATCCAGGTTTTCTCCAATGAGGGCCAGTTCAAGTTCCGTTTTGGGGTCCGAGGGCGCTCACCCGGGCAGCTGCAGCGCCCTACAGGTGTAGCAGTGGACACCAATGGGGACATTATTGTCGCAGACTACGACAACCGCTGGGTCAGCATCTTCTCCCCTGAGGGCAAGTTCAAGACCAAGATTGGAGCTGGCCGCCTCATGGGGCCCAAAGGAGTGGCTGTGGACCGGAATGGACATATCATTGTGGTCGACAACAAATCCTGCTGTGTCTTCACGTTCCAGCCCAATGGCAAGCTGGTTGGACGTTTTGGGGGCCGTGGGGCCACAGATCGCCACTTTGCAGGGCCTCATTTTGTGGCTGTGAACAACAAGAATGAGATTGTAGTAACGGATTTCCATAATCATTCGGTGAAGGTATACAGTGCCGACGGGGAGTTCCTCTTCAAGTTTGGTTCCCATGGAGAGGGCAATGGGCAGTTCAACGCCCCTACAGGAGTAGCTGTGGACTCCAATGGGAACATCATCGTGGCCGACTGGGGCAACAGCCGCATCCAGGTATTTGACAGCTCTGGCTCCTTCCTGTCCTATATCAACACATCTGCAGAGCCATTGTACGGCCCACAGGGCTTGGCACTGACCTCCGATGGCCACGTGGTGGTGGCTGATGCTGGCAACCACTGCTTTAAGGCCTACCGCTACCTCCAGTAG

Related Sequences

XP_004863456.1 Protein

Trim3 PREDICTED: tripartite motif-containing protein 3 isoform X7 [Heterocephalus glaber]

Length: 744 aa      View alignments
>XP_004863456.1
MAKREDSPGPEVQPMDKQFLVCSICLDRYRCPKVLPCLHTFCERCLQNYIPAQSLTLSCPVCRQTSILPEQGVSALQNNFFISSLMEAMQQVPDGARDPEDPHPLSAVAGRPLSCPNHEGKTMEFYCEACETAMCGECRAGEHREHGTVLLRDVVEQHKAALQRQLEAVRGRLPQLSAAIALVGGISQQLQERKAEALAQISAAFEDLEQALQQRKQALVSDLESICGAKQKVLQTQLDTLRQGQEHIGSSCSFAEQALRLGSAPEVLLVRKHMRERLSALAAQAFPERPHENAQLELVLEVDGLRRSVLNLGALLTTSATAHETVATGEGLRQALVGQPASLTVTTKDKDGRLVRTGSAELRAEITGPDGTRLPVPVVDHKNGTYELVYTARTEGELLLTVLLYGQPVRGSPFRVRALRPGDLPPSPDDVKRRVKSPGGPGSHVRQKAVRRPSSMYSTGGKRKDNPIEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMGPKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIVVTDFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSSGSFLSYINTSAEPLYGPQGLALTSDGHVVVADAGNHCFKAYRYLQ