Details from NCBI annotation

Gene Symbol Trim21
Gene Name tripartite motif containing 21, transcript variant X2
Entrez Gene ID 101709110

Database interlinks

Part of NW_004624817.1 (Scaffold)

For more information consult the page for NW_004624817.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TRIM21 ENSCPOG00000012189 (Guinea pig)

Gene Details

tripartite motif containing 21

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010962, Guinea pig)

Protein Percentage 75.16%
CDS Percentage 84.51%
Ka/Ks Ratio 0.62861 (Ka = 0.157, Ks = 0.2497)

TRIM21 ENSG00000132109 (Human)

Gene Details

tripartite motif containing 21

External Links

Gene Match (Ensembl Protein ID: ENSP00000254436, Human)

Protein Percentage 74.52%
CDS Percentage 81.51%
Ka/Ks Ratio 0.36595 (Ka = 0.1602, Ks = 0.4377)

Trim21 ENSMUSG00000030966 (Mouse)

Gene Details

tripartite motif-containing 21

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000033264, Mouse)

Protein Percentage 69.91%
CDS Percentage 75.76%
Ka/Ks Ratio 0.2517 (Ka = 0.2028, Ks = 0.8056)

Trim21 ENSRNOG00000018517 (Rat)

Gene Details

tripartite motif-containing 21 (Trim21), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000024992, Rat)

Protein Percentage 69.81%
CDS Percentage 76.16%
Ka/Ks Ratio 0.29001 (Ka = 0.2059, Ks = 0.7101)

Genome Location

Sequence Coding sequence

Length: 1404 bp    Location: 5651499..5643788   Strand: -
>XM_004863336.1
ATGGCCTCAGCAAAGCCCTTGACAATGATGTGGGACGAGGTAACATGCTGTATCTGCCTAGATCCCGTGGTGGAACCTATGAGCATTGACTGTGGCCACAGCTTCTGCCGGGAGTGCATATCTGAGGTGGGGAAAAGCGGAGGTGGTGTCTGTCCTGAGTGCCGGCAGTGCTTTCTGCTCAAAAACCTCAGGCCCAATCGGCAGCTAGCCAATATGGTGGATATGCTGAGACAAATGAACCAGGATGCCAAGCAGGGCACACAGGAGGAACAGTGTGCGGTGCACGGAGAGAGATTTCACCTGTTCTGTGAGAAAGATGGGCAGCCGCTCTGCTGGGTGTGTTCCCAATCCAAGAAACACCAAAAGCACACCATGGTCCCTATTGAAGAGGCAGCTCGAGAGTACCAGGAGAAGATCCAAGTGGAATTAGAGAAACTGAGAAAACAGCAGGAATTGGTTGAGAAGTTGGAAGTGGATCTTGCAGTGAAGAGAGCAGACTGGAAGAGGGAAGTTGAGATGCACAAATCGAGGATTCATGCAGAGTTTGTGCAGCAGAGAAACTTCCTGTGTGAGGAGGAAAAGAGGCAGCTGCAGAAGCTGGAAAAAGATGAAAGGGAACATCTGAGAATTCTGGGAGAAACAGAGACTGAAATGACCCAACAGAGCCAGGCCCTGCAGACACTGATCTCAGAGCTGGAGCGGAGGAGTCGGGGTTCTGCCCTGGAGCTGCTGCAGGAGGTGACGGTTGTCCTGAAAAGGAGTGAGTGCTGGAACCTGACAAAGCTGGACATTGCCACCCCAGCCCTGAGCAGGATGTGCTGTGTGCCAGGGCTGAAGAAGATGCTGAGGATGTGTGGAGTACACATCACTCTGGATGGAGACACAGCAAATCAGTGGCTTGTTCTTTCAAAAACTCGGAGGCAAGTAAGGTTTGGAGATACCCGACAGCAGGTGCCGGAAAATGAAGAGCGGTTTGATAATTATCCCATAGTTCTGGGTGCCCAAAGTTTCAATTCTGGAAAATTTTACTGGGAGGTAGATGTGACAGGAAAGGAGGCCTGGGACCTAGGAGTTTGTAGAAACTCTGTGCAGAGGAAGGGAATTTTTTTGCTCAACCCTGAGAATGGCTTCTGGACAATTTGGTTGTGGAAAAAAGAAGAATACTATGCTGGCACCCTTCCCCAGACTCGCCTCCACCTTCAGGTGCCTCCGTGCCAAATCGGGATTTTCCTGGACTATGAGGCTGGTATTGTCTCCTTCTACAATGCCAGTGACCATGGTTCCCTCATCTACACTTTCTCTGAATGTGCCTTTGCTGGATCTCTACGGCCCTTCTTCAATCCTGGTTTCAATGACAATGGAAGAAATTCGGCCCCTCTGACCCTCTGTCCCCTGAAAATGTGA

Related Sequences

XP_004863393.1 Protein

Trim21 PREDICTED: E3 ubiquitin-protein ligase TRIM21 isoform X2 [Heterocephalus glaber]

Length: 467 aa      View alignments
>XP_004863393.1
MASAKPLTMMWDEVTCCICLDPVVEPMSIDCGHSFCRECISEVGKSGGGVCPECRQCFLLKNLRPNRQLANMVDMLRQMNQDAKQGTQEEQCAVHGERFHLFCEKDGQPLCWVCSQSKKHQKHTMVPIEEAAREYQEKIQVELEKLRKQQELVEKLEVDLAVKRADWKREVEMHKSRIHAEFVQQRNFLCEEEKRQLQKLEKDEREHLRILGETETEMTQQSQALQTLISELERRSRGSALELLQEVTVVLKRSECWNLTKLDIATPALSRMCCVPGLKKMLRMCGVHITLDGDTANQWLVLSKTRRQVRFGDTRQQVPENEERFDNYPIVLGAQSFNSGKFYWEVDVTGKEAWDLGVCRNSVQRKGIFLLNPENGFWTIWLWKKEEYYAGTLPQTRLHLQVPPCQIGIFLDYEAGIVSFYNASDHGSLIYTFSECAFAGSLRPFFNPGFNDNGRNSAPLTLCPLKM