Details from NCBI annotation

Gene Symbol Clpb
Gene Name ClpB caseinolytic peptidase B homolog (E. coli), transcript variant X1
Entrez Gene ID 101697583

Database interlinks

Part of NW_004624817.1 (Scaffold)

For more information consult the page for NW_004624817.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CLPB ENSCPOG00000005865 (Guinea pig)

Gene Details

ClpB caseinolytic peptidase B homolog (E. coli)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005291, Guinea pig)

Protein Percentage 92.87%
CDS Percentage 93.16%
Ka/Ks Ratio 0.18684 (Ka = 0.0352, Ks = 0.1883)

CLPB ENSG00000162129 (Human)

Gene Details

ClpB caseinolytic peptidase B homolog (E. coli)

External Links

Gene Match (Ensembl Protein ID: ENSP00000294053, Human)

Protein Percentage 91.54%
CDS Percentage 89.47%
Ka/Ks Ratio 0.12654 (Ka = 0.0451, Ks = 0.3562)

Clpb ENSMUSG00000001829 (Mouse)

Gene Details

ClpB caseinolytic peptidase B

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000001884, Mouse)

Protein Percentage 88.72%
CDS Percentage 86.3%
Ka/Ks Ratio 0.11155 (Ka = 0.0594, Ks = 0.5326)

Clpb ENSRNOG00000019693 (Rat)

Gene Details

caseinolytic peptidase B protein homolog

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000026665, Rat)

Protein Percentage 88.13%
CDS Percentage 85.16%
Ka/Ks Ratio 0.12972 (Ka = 0.0711, Ks = 0.5478)

Genome Location

Sequence Coding sequence

Length: 2025 bp    Location: 4593913..4735091   Strand: +
>XM_004863298.1
ATGTTGGGATCCTTGGTATTGAAGAGAACAGCGCCGGCGCCGCGGCTCCTCCTCCGGCTGCTCGGGGCTCCATCGATCCAGAGCCATGGAATTGCCTTTGGCCGGAGTGTAATCACTGGGGACCGCGTGGAACTACAGTGGCTGAGAGCGGCCGCCGGAGGGCGCCCTGGAACATCTTTGGCCTTGCTCCCCGAGCAAGGAGCAGCCACCGGGGGGCGCCAGGGAAGACTCAGAGAGACTCAGTACTTGGCTGCCTCCACGTGGGGGCGCCTTCCTACCCCCGAAGAAACACTCCCAGGACACAACTGGAATGGGTTCCCTAACAGAGCTGGACTGGGCGTGTGGGCCCTGGCCACGGCGCTGGTGGTTCATTGCTACAGCAAGAATCCATCCAACAAGGATGCAGCCCTGATGGAAGCTGCCCGAACCAACAATGTACAAGAAGTCACCAGGCTGTTGTCAGAAGGTGCAGATATCAATGCAAGACACAAACTTGGCTGGACGGCACTCATGGTGGCAGCCATCAACCGAAATGACAGTGTGGTACAGATTCTGCTTGCTGCTGGGGCTGACCCAAACCTTGGGGATGATTTCAGCAGTGTCTACAAGACTGCCAAGGAGCAGGGAATCCATTCTTTAGAAGTCCTGGTCACCCGAGAGGATGATTTCAATAACCGACTAAACAACCGTGCCAGCTTCAAAGGCTGTACAGCCCTGCACTACGCTGTCCTTGCTGATGACTACCGCACCGTCAAGGAGCTGCTTGATGGAGGAGCCAACCCCCTGCAGAGGAATGAAATGGGACACACACCGTTGGATTATGCCCGAGAAGGGGAAGTGATGAAGCTTCTGAGGACTTCAGAGGCCAAGTACCAGGAGAAGCAACGTAAGCGTGAGGCTGAGGAACGGCGCCGCTTCCCCCTGGAGCAGCGACTGAGGGAGCACATCATTGGCCAGGAGAGTGCCATCACCACCGTGGGTGCTGCGATTCGGAGGAAGGAGAATGGCTGGTACGATGAAGAACACCCTCTGGTCTTCCTCTTCTTGGGATCATCTGGAATAGGAAAGACAGAACTGGCCAAGCAGACAGCCAAATACATGCACAAAGATGCCAAAAAGGGCTTCATCAGGCTGGACATGTCTGAGTTCCAGGAGCGACATGAGGTGGCCAAGTTCATTGGGTCCCCACCAGGATATATCGGCCATGAGGAGGGTGGGCAGCTGACCAAGAAGTTAAAGCAGTGCCCCAATGCCGTGGTGCTCTTCGATGAGGTGGACAAGGCCCATCCAGATGTGCTTACCATCATGCTGCAGCTGTTTGATGAGGGCCGGCTAACCGATGGGAAGGGGAAGACAATCGACTGCAAGGATGCCATCTTCATCATGACCTCCAATGTGGCCAGTGACGAGATTGCACAGCACGCCCTGCAGTTGAGGCAGGAAGCTTTGGAGATGAGCCGTAACCGTATCGCTGAAAACCTTGGTGATGTCCAGATTAGTGATAAGATCACCATCTCAAAGAACTTTAAGGAGAATGTAATCCGCCCCATCCTGAAAGCTCATTTCCGGAGGGATGAGTTTCTGGGACGGATCAATGAGATTGTCTACTTCCTCCCCTTCTGCCACTCGGAGCTCATCCAACTAGTCAACAAGGAACTGAACTTCTGGGCCAAGAGAGCCAAGCAAAGGCACAACATCACACTGCTGTGGGACCGAGAGGTGGCAGACGTGTTGGTTGACGGCTACAATGTGCACTATGGTGCCCGCTCCATCAAGCACGAGGTCGAGCGCCGCGTGGTGAACCAGCTGGCAGCAGCTTATGAACAGGACCTGCTACCAGGAGGTTGTACTCTGCGCATCACTGTGGAAGACTCAGACAAGCAGCTCCTCAAAAGCCCTGAACTGCCCCAGGCTGAGAAGCGTGCACCCAAGCTTCGGCTAGAGATCATTGATAAGGACAGCAAGACCCGAAAACTGGACATCCGGGCACCACTGAACCCCGAGAAGGTGTGCTACACCATCTAG

Related Sequences

XP_004863355.1 Protein

Clpb PREDICTED: caseinolytic peptidase B protein homolog isoform X1 [Heterocephalus glaber]

Length: 674 aa      View alignments
>XP_004863355.1
MLGSLVLKRTAPAPRLLLRLLGAPSIQSHGIAFGRSVITGDRVELQWLRAAAGGRPGTSLALLPEQGAATGGRQGRLRETQYLAASTWGRLPTPEETLPGHNWNGFPNRAGLGVWALATALVVHCYSKNPSNKDAALMEAARTNNVQEVTRLLSEGADINARHKLGWTALMVAAINRNDSVVQILLAAGADPNLGDDFSSVYKTAKEQGIHSLEVLVTREDDFNNRLNNRASFKGCTALHYAVLADDYRTVKELLDGGANPLQRNEMGHTPLDYAREGEVMKLLRTSEAKYQEKQRKREAEERRRFPLEQRLREHIIGQESAITTVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEALEMSRNRIAENLGDVQISDKITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPFCHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARSIKHEVERRVVNQLAAAYEQDLLPGGCTLRITVEDSDKQLLKSPELPQAEKRAPKLRLEIIDKDSKTRKLDIRAPLNPEKVCYTI