Sequence details NCBI ID: XM_004863281.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Atg16l2
Gene Name autophagy related 16-like 2 (S. cerevisiae)
Entrez Gene ID 101723082

Database interlinks

Part of NW_004624817.1 (Scaffold)

For more information consult the page for NW_004624817.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ATG16L2 ENSCPOG00000023584 (Guinea pig)

Gene Details

autophagy related 16-like 2 (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000020791, Guinea pig)

Protein Percentage 87.18%
CDS Percentage 89.29%
Ka/Ks Ratio 0.25132 (Ka = 0.0721, Ks = 0.2867)

ATG16L2 ENSG00000168010 (Human)

Gene Details

autophagy related 16-like 2 (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSP00000326340, Human)

Protein Percentage 84.17%
CDS Percentage 87.56%
Ka/Ks Ratio 0.22521 (Ka = 0.0861, Ks = 0.3822)

Atg16l2 ENSMUSG00000047767 (Mouse)

Gene Details

autophagy related 16-like 2 (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000112500, Mouse)

Protein Percentage 79.29%
CDS Percentage 82.13%
Ka/Ks Ratio 0.19422 (Ka = 0.1211, Ks = 0.6234)

Atg16l2 ENSRNOG00000019413 (Rat)

Gene Details

autophagy related 16-like 2 (S. cerevisiae) (Atg16l2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000026286, Rat)

Protein Percentage 79.78%
CDS Percentage 81.97%
Ka/Ks Ratio 0.18926 (Ka = 0.1208, Ks = 0.6384)

Genome Location

Sequence Coding sequence

Length: 2364 bp    Location: 4153543..4140469   Strand: -
Raw sequence   
>XM_004863281.1
ATGCCATCACCTCCGGAAAGAAAGTCTCTTCTCTTCAATCTATTCTGCCTCTGTGCTTTTGTCATACCGCATGTGCCTTGTGGTGTCTGTGTTCTCTCGGAGTCCGGATCCGGAGTCCGGATTTCTGACTGGAGCGTGGGGACACGGGAGAGCATCTTCTTTGAAGCTTGGGCCGGGCGCTGTGGGGTTAAGGACCTGGGCCTAGTGGCCCCGCCTGCGGAGCGCACCAGCCGGCGAGGGGGAGGCCGCCTCGGAGGCTCCGACCCTGAGCCCCTCGTATCAATCACCCCAGACACCGACGGGAGCCCCTCCGAGGTAAACGATTTGGTGGGCCTCAGCGGCGTAGACCCGAGGCGGCTTTCCCAAGCCCGAGTGGAGCGCTCCCCCGTGCGCACGCTTGGTACTACCAGGGGAATCCCCGCGCGGCCCCGCCCCTCTGGTACTTGCCTTCTCCGGCTGGAGCGCGCACCGAGCGAGTGGAAGACGGCGGCCATGGCGGGGTCCGGGGGCCTCAGCGTCCCTGACGCCCCAGCTGCCCTCTGGAAACGTCACATCATGCGGGAGCTGCGGCAGCGGGACCGCACACAAAAGGCGCTCTTCCTGGAGCTGGTGCCGGCCTATAACCATCTCCTAGAGAAGGCTGAGCTGCTGGCCACATTCTCAGAGAAGCTGCATCTGGAGCCCAGCAATGTCACTCCTGCCTCCGACCAGGGCTCCTGGGAGGAGGAGTCACGGCCTGAGTCAGACCAGGTACCATCACTGGCCACTCTGAAGGTGAAGTGGCAGGAGGAAGAGGAGGGGCTTCGGCTGGTCTGTGGTGAGATGGCCTACCAGGTGGTTGAGAAGAGCGCAGCTCTGGGCACCCAGCAGTTGCAGCTGGAGGAACGGCAAGGCAGGCTGGCGGTTCTGGAGGCCCAAGTGGCACATCTGCAAGAGGCGCGGGCAAAGCAGACCCAACTGGTGGAAGAGCAGCGGGCGCAGAATGTGGTGCAGCGGACGGCCTACGAGGTCCTGCGTGTTCGCACCGGGAACCAGGAGGCGGAACTGCGCAGGCTCCAGGAGGAGGCCAGCTGCCTGCTGGAGCGGCTAGTGCAACTCAAGGCGCGAGCTGCCGACGAGCTCAACCTGCGCCTTGAGCGCCTGGAGCGGGCCAGTCAGGCTCGGGTGTCTCAGGAGCTGAAGAAGGCTGCCAAGCGGACAGTGAGCATCAGCGAGATCCCAGACTCCCTAGGCAAAGGGATCAGGGAGGGCACAGAGGCTCTGACCCTGGCTGCTAAGCCAGACTCCCTGGAGAGCAAGGCTTGTGAGAAGTGGAAGAGGCCCTTCAGGTCTGCCTCGGCCACCTCTCTGACACTGTCCTGCTGTGTGGATGTGGTGAAGGGGCTGCTGGATTTTAAGAAGAGGAGAGGTCACTCAATTGGAGGTGTCCCTGAGCAGCAATACCAAAGCATCCCTATATGTGTGGCTGCCAAGCTTCCTGTCCAGGCTCTGGATGTTCTGGATGCCCACCTTTCTGAGGTCAATGCCGTTCATTTTGGCCCTAACAGCAACCTCTTGGCCACTGGCGGGGCTGACCGCCTCATCCACCTCTGGAATATTGTAGGAGGACGCCTGGAGGCCAACCAGACCCTCGAGGGAGCTGGTGGCAGCATCACCAGTGTGGACATAGACCCCTCGGGCTCCCAGGTTTTAGCAGCTACTTACAACCAGGCTGCCCAGCTCTGGAAGGTGGGAGAGGCACATTCCAAGGAGACACTGTCTGGACACAAGGACAAGGTGACAGCTGCCAAATTCAAGCTAACAAGGCATCAGGCGGTGACTGGGAGTCGAGACCGCACAGTGAAGGAGTGGGACCTTGGACGCGCCTACTGTTCCAGGACCATCAATGTCCTTTCCTACTGCAATGACGTGGTATGTGGGGACCACATCATCATTAGTGGCCACAATGACCAGAAGATCCGGTTCTGGGACAGCAGGGGGCCCTGCTGCACCCAGGTCATCCCTGTGCAGGGCAGAGTCACCTCCCTGAGCCTCAGCAATGACCAGCTGAATCTGCTCAGCTGTTCCCGTGACGACACACTCAAGGTCATTGACCTGCGCGTCAGCAATGTCCGCCAGGTGTTCAGGGCCGATGGCTTCAAGTGTGGTTCTGACTGGACCAAAGCTGTGTTCAGCCCTGACAGACGCTATGCACTGGCAGGCTCCTGGGACGGAGCTCTGTACATCTGGGACGTAGACACCGGGAAACTGGAGAGCACCCTTCAGGGGCCCCACTGTGTTGCTGTCAATGCCGTGGCCTGGTGCTGCTCCGGGAGCCATGTGGTGAGCGTGGACCAGGGCAGGAAGGTGGTACTCTGGCACTAG

Related Sequences

XP_004863338.1 Protein

Atg16l2 PREDICTED: autophagy-related protein 16-2 [Heterocephalus glaber]

Length: 787 aa      View alignments
>XP_004863338.1
MPSPPERKSLLFNLFCLCAFVIPHVPCGVCVLSESGSGVRISDWSVGTRESIFFEAWAGRCGVKDLGLVAPPAERTSRRGGGRLGGSDPEPLVSITPDTDGSPSEVNDLVGLSGVDPRRLSQARVERSPVRTLGTTRGIPARPRPSGTCLLRLERAPSEWKTAAMAGSGGLSVPDAPAALWKRHIMRELRQRDRTQKALFLELVPAYNHLLEKAELLATFSEKLHLEPSNVTPASDQGSWEEESRPESDQVPSLATLKVKWQEEEEGLRLVCGEMAYQVVEKSAALGTQQLQLEERQGRLAVLEAQVAHLQEARAKQTQLVEEQRAQNVVQRTAYEVLRVRTGNQEAELRRLQEEASCLLERLVQLKARAADELNLRLERLERASQARVSQELKKAAKRTVSISEIPDSLGKGIREGTEALTLAAKPDSLESKACEKWKRPFRSASATSLTLSCCVDVVKGLLDFKKRRGHSIGGVPEQQYQSIPICVAAKLPVQALDVLDAHLSEVNAVHFGPNSNLLATGGADRLIHLWNIVGGRLEANQTLEGAGGSITSVDIDPSGSQVLAATYNQAAQLWKVGEAHSKETLSGHKDKVTAAKFKLTRHQAVTGSRDRTVKEWDLGRAYCSRTINVLSYCNDVVCGDHIIISGHNDQKIRFWDSRGPCCTQVIPVQGRVTSLSLSNDQLNLLSCSRDDTLKVIDLRVSNVRQVFRADGFKCGSDWTKAVFSPDRRYALAGSWDGALYIWDVDTGKLESTLQGPHCVAVNAVAWCCSGSHVVSVDQGRKVVLWH