Details from NCBI annotation

Gene Symbol Gdpd5
Gene Name glycerophosphodiester phosphodiesterase domain containing 5, transcript variant X3
Entrez Gene ID 101701090

Database interlinks

Part of NW_004624817.1 (Scaffold)

For more information consult the page for NW_004624817.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

GDPD5 ENSCPOG00000010246 (Guinea pig)

Gene Details

glycerophosphodiester phosphodiesterase domain containing 5

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009201, Guinea pig)

Protein Percentage 94.88%
CDS Percentage 93.33%
Ka/Ks Ratio 0.09212 (Ka = 0.0247, Ks = 0.2683)

GDPD5 ENSG00000158555 (Human)

Gene Details

glycerophosphodiester phosphodiesterase domain containing 5

External Links

Gene Match (Ensembl Protein ID: ENSP00000337972, Human)

Protein Percentage 91.74%
CDS Percentage 90.69%
Ka/Ks Ratio 0.08274 (Ka = 0.0386, Ks = 0.4666)

Gdpd5 ENSMUSG00000035314 (Mouse)

Gene Details

glycerophosphodiester phosphodiesterase domain containing 5

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000036175, Mouse)

Protein Percentage 88.76%
CDS Percentage 86.5%
Ka/Ks Ratio 0.07879 (Ka = 0.059, Ks = 0.7482)

Gdpd5 ENSRNOG00000036859 (Rat)

Gene Details

Protein Gdpd5; Putative uncharacterized protein RGD1559673_predicted

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000052189, Rat)

Protein Percentage 89.59%
CDS Percentage 87.05%
Ka/Ks Ratio 0.07922 (Ka = 0.0539, Ks = 0.6805)

Genome Location

Sequence Coding sequence

Length: 1818 bp    Location: 1596813..1689428   Strand: +
>XM_004863223.1
ATGGTGAGACACCAGCCCCTGCAGTACTATGAGCCACAGCTGTGCCTCTCCTGCCTCACAGGCATCTACGGCTGCCGCTGGAAGCGCTACCAGCGCTCTCATGATGATACCACACCGTGGGAGCGTCTCTGGTTCCTGCTGCTCACCTTCACCTTCGGCCTCACGCTCACCTGGCTCTACTTCTGGTGGGAAGTCCACAATGACTACGATGAATTCAACTGGTACCTCTACAACCGCATGGGCTACTGGAGCGACTGGTCTGTGCCCATCCTTGTGACCACAGCCACTGCCTTCACATACATTGCAGGCCTCCTGGTGCTGGCACTATGTCACATTGTCGTGGGGCAGCAGATGAACCTGCACTGGCTGCACAAGATTGGGCTGGTGGTCATCCTGGCCTCCACAGTGGTGGCCATGTCAGCAGTGGCCCAGCTGTGGGAGGACGAATGGGAAGTGCTGCTGATCTCCCTGCAGGGCACATCGCCATTCCTGCACTTGGGAGCCCTGGCTGCTGTCACGATGCTCTCCTGGATCGTGGCAGGACAGTTCGCACGCGCAGAGCGGTCCTCTTCCCAGGTGACCATTCTCGGCACCTTCTTCACCGTGGTTTTTGCCCTCTACCTGGCCCCTCTCACCATCTCCTCTCCCTGCATCATGGAGAAAAAGGACCTGGGCCCCAAGCCCACCCTCATCGGCCATCGTGGGGCCCCCATGCTGGCTCCAGAGCACACACTGATGTCCTTCCGGAAGGCCCTAGAGCAGAAGCTGTATGGGATCCAGGCTGATGTCACCATCAGCCTGGATGGTGTGCCTTTCCTCATGCATGACGCTAACCTGCGGCGAACCACCAATGTGGAGCAGGTGTTCCCAGAGCTCGCCCGCAGGCCCGCCTCCATGCTCAACTGGACTGTCCTGCAGAGGCTCAATGCTGGCCAGTGGTTCCTGAAGACGGATCCCTTCTGGACTGCCAGCTCCCTGTCACCCTCCGACCACAGGGAGGCCCAGAACCAATCCATCTGCAGCCTGGATGACCTGCTGGAGCTGGCCAAGGGCAACACCACACTGCTGCTCAACCTGCGTGAACCACCCCGTGACCATCCCTTCCGCAGCAGCTTTGTTAACATCACGCTGGAGACCCTGCTGCGCTCTGGCTTTCCACAGCACCAGGTCATGTGGCTGCCTAACAGGCAGAGGCCCTTCGTGCGGAAGGTGGCTCCCGGCTTCCAGCAGATGGCAGGCTCCAAGGAGGCGGTGGCCAGCCTGCGGAGAGGCCACATCCAGTGGCTGAACCTGCGCTACACTCAGGTGTCTGGCCAGGAGCTCAGGGACTATGCATCCTGGAATCTGAGTGTGAACCTCTACACTGTCAATGCACCATGGCTCTTCTCCTTGTTGTGGTGCACTGGGGTCCCATCTGTCACCTCCGACAACTCCCACACCCTGTCCCAGGTGCCTTCCCCCCTCTGGATCATGCCCCCGGATGAGTACTGTCTCATGTGGGTCACTGCCGACTTGATCTCCTTCACCCTCATCATTGGCATCTTCGTGTTCCAGAAGTGGCGCCTGGGCGGCATACGGAGCTACAATCCTGAGCAGATCATGCTGAGCGCTGCAGTGCGCCGGACCAGCCGGGATGTCAGCATCATGAAGGAGAAGCTCATCTTCTCAGAGATCAGCGATGGCGTGGAGGTCTCAGATGAGCTCTCCATGTGTTCCGACAGCAGTTATGACACATACACCAACAGCACTGCCACCCCTTCAGGCCCCCGAGGGGGCAGCAGCCATACCAAGACTCTCACGGACCAGGGTGGGCATTAG

Related Sequences

XP_004863280.1 Protein

Gdpd5 PREDICTED: glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X3 [Heterocephalus glaber]

Length: 605 aa      View alignments
>XP_004863280.1
MVRHQPLQYYEPQLCLSCLTGIYGCRWKRYQRSHDDTTPWERLWFLLLTFTFGLTLTWLYFWWEVHNDYDEFNWYLYNRMGYWSDWSVPILVTTATAFTYIAGLLVLALCHIVVGQQMNLHWLHKIGLVVILASTVVAMSAVAQLWEDEWEVLLISLQGTSPFLHLGALAAVTMLSWIVAGQFARAERSSSQVTILGTFFTVVFALYLAPLTISSPCIMEKKDLGPKPTLIGHRGAPMLAPEHTLMSFRKALEQKLYGIQADVTISLDGVPFLMHDANLRRTTNVEQVFPELARRPASMLNWTVLQRLNAGQWFLKTDPFWTASSLSPSDHREAQNQSICSLDDLLELAKGNTTLLLNLREPPRDHPFRSSFVNITLETLLRSGFPQHQVMWLPNRQRPFVRKVAPGFQQMAGSKEAVASLRRGHIQWLNLRYTQVSGQELRDYASWNLSVNLYTVNAPWLFSLLWCTGVPSVTSDNSHTLSQVPSPLWIMPPDEYCLMWVTADLISFTLIIGIFVFQKWRLGGIRSYNPEQIMLSAAVRRTSRDVSIMKEKLIFSEISDGVEVSDELSMCSDSSYDTYTNSTATPSGPRGGSSHTKTLTDQGGH