Sequence details NCBI ID: XM_004863216.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Map6
Gene Name microtubule-associated protein 6, transcript variant X1
Entrez Gene ID 101699657

Database interlinks

Part of NW_004624817.1 (Scaffold)

For more information consult the page for NW_004624817.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

MAP6 ENSCPOG00000022131 (Guinea pig)

Gene Details

microtubule-associated protein 6

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000014521, Guinea pig)

Protein Percentage 72.16%
CDS Percentage 77.07%
Ka/Ks Ratio 0.4771 (Ka = 0.2268, Ks = 0.4753)

MAP6 ENSG00000171533 (Human)

Gene Details

microtubule-associated protein 6

External Links

Gene Match (Ensembl Protein ID: ENSP00000307093, Human)

Protein Percentage 79.18%
CDS Percentage 83.82%
Ka/Ks Ratio 0.3816 (Ka = 0.1351, Ks = 0.354)

Map6 ENSMUSG00000055407 (Mouse)

Gene Details

microtubule-associated protein 6

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000064787, Mouse)

Protein Percentage 74.02%
CDS Percentage 79.34%
Ka/Ks Ratio 0.32546 (Ka = 0.17, Ks = 0.5222)

Map6 ENSRNOG00000027204 (Rat)

Gene Details

microtubule-associated protein 6 (Map6), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000032018, Rat)

Protein Percentage 68.45%
CDS Percentage 77.71%
Ka/Ks Ratio 0.49007 (Ka = 0.2205, Ks = 0.45)

Genome Location

Sequence Coding sequence

Length: 2406 bp    Location: 1489039..1554389   Strand: +
Raw sequence   
>XM_004863216.1
ATGGCGTGGCCGTGCATTACGCGGGCCTGCTGCATCGCCCGCTTCTGGAACCAGCTGGACAAGGCGGACATCGCCGTGCCGCTGGTATTCACCAAGTATTCGGAGGCCACCGAGCACCCGGGCGCCCCACCGCAGCCCCCACCGTCGTCCCAGCAGCAGGCGCAGCCGGCGCTCGCGGCCCCCTCGGCGCGCGCGGTCGCCATAGAGACACAGCCGGCCCAGGGCGAGTTGGATGCAGTTGCCCGGGCAACAGGGCCGGCGCCGGGGCCCAGCGGCGAGCGGGAGGTTGCGGCCGCCGGCCGGAGCGCGCCGGGCCTGGGCCCCGGCTCCAGCTCCACCTCCACCTCCGGGGCCGGCCCCGCGGACTCGGTGATGCGGCAGGACTACCGCGCGTGGAAGGTACAGCGGCCCGAGCCCAGCTGCCGGCCGCGCAGCGAGTACCAGCCGTCGGACGCGCCCTTCGAGCGTGAGACCCAGTACCAGAAGGACTTCCGCGCATGGCCGCTGCCGCGCCGCGGGGACCACCCCTGGATCCCCAAGCCCGTACAGATCCCTGCGCCTTCTCAGGCTTCCGCGCCTATTTTCGGGACGCCCAAGCGCCGGCCTCAGAGCCAGGAGCGCTGGCCGGTGCAGATCGCTGCTGAGGCCCCAGAGCCCGAGGCTCCCGGAGAAACCGGTGTCCTGGCTGCAGGGAAGACCTCGGGTGCAGAGGAGCGCGACACCCGTAGAAAGGCCAGCCCGGCCTGGATGGTGCGTCGCTCCGAGGGTCACGAGCAGACGCCACTGCCCGCCACCCAGGCCCAGGCGGGAGCCGGTGGCCCGGCGGCTGGAAGGGCAACGAGTGCAGAGGAGCGCGACAGTCGTAGAAAGGCCGGACCGGCCTGGATGGTGCGTCGCTCCGAGGGTCACGAGCAGACGCCACTGCCCGCCACCCAGGCCCAGGCCGCGGAGGGTGGCAAGGGGCGTGCGGCGGCGGACGCCCTCAACCGGCAAATCCGCGAGGAAGTGACGAGTGCAGTGAGCAGCTCCTACAGGAATGAATTCAGAGCATGGACGGACATCAAGCCTGTGAAACCAATAAAAGCCAAGCCCCAGTACAAGCCCCCAGATGACAAGATGGTTCATGAGACCAGCTACAGCGCCCAGTTCAAAGGGGAGGCCAGTAAGCCAACTGCAGCTGATAATAAGGTCATTGACCGCAGAAGAATACGCAGCCTCTATAGTGAACCTTTCAAGGAACCTCCAAAGGTGGAGAAACCTAGTGTTCAGAGTTCCAAACCAAAAAAGACCTCAGCGACCCATAAGCCCCCGAGGAAGGCCAAAGACAAGCAGGTGGTGTCGGGCCAGGCTGCCAAGAAAAAGAGCACAGAGGGCCCCAGTGCCACCAAACCTGATGACAAGGAGCAAAGTAAAGAGATGAACAATAAACTGGCTGAGGCTAAAGAGAGCCCCATCCAACCCACCGATGATTCCTGTAAGAATAAAGGCCCTGTAGCCACAGAGCCAGACAAGGATAAAGGTCCTGTGGTCTCAGGACTTCTGAAAGGCCAAAGTCCTATGATCCAAGAGGCTCCAAAGGATCAAGGGCCCATAGTACTGGGACTTCCAAAGGATCAAGGTCCTGTGGTTCTAGGGCCTCCAAAGGATCAAGGTCCTGTAGTCCCATGGCCTCCAAAGGATCAAGGTCCTGTGGTCTCAGGGCATCCAAAGGATCAAGGTCCTGTGGTCCCTGAGCCTCCAAAGGATCAAGGTCCTGTGGTCCCTGAGCCTCCAAAGGATCAAGGTCATATGGTCCCAGTACCAATCAAGGATAAAGGTCATGTGGTTCCTGAGCCTTTAAAGAATGAAGAATCTGTGATATCAGCACTAGCCAAGGACCAAAGTCCCTTGATCCCAGATCCTCTGAAGAATCAAAGTCCTATGGTTCCAGGAAGACTTAAGGATCAAGGTTTTGTGACACCAGCACTTCCAAAGGATCAAGGTTCTGTGGTCCTGACACCTGTCAAGGATCAAGTTTCCATGGTCTCAGCTTCTGACAAAGATCAAGGTCTCATGGTCCCAGAGCATTGGAAGGATCAAAGTGCCATGGTCATAGCACCTGTAAAGAATCAAGGTCCTGTGGTCCCTGAGTTTGTAAAGAGCCAAGACCCCATTGTTCCAGCAGTAACCAAGAATCAAGGTCACATGGTCTCAGAGCCTCCAAAGAATCAAGGTCCTATAATCCCGGTGCCTCTGAAGGATCAAGATCCTCTGGTGCCAGCACCAGCAAAAGTCCAAGGTCCTGTGGTCCCCGAAACTCTGAAGACTCAAGGTCCCAGGGTCCCTCAGCTGCCCACTGTCTCACCTCCACCCCCAGTCATGATCCCAACTGTCCCTCATGGAGAATATATTGAGGGGTCTCCTTGA

Related Sequences

XP_004863273.1 Protein

Map6 PREDICTED: microtubule-associated protein 6 isoform X1 [Heterocephalus glaber]

Length: 801 aa      View alignments
>XP_004863273.1
MAWPCITRACCIARFWNQLDKADIAVPLVFTKYSEATEHPGAPPQPPPSSQQQAQPALAAPSARAVAIETQPAQGELDAVARATGPAPGPSGEREVAAAGRSAPGLGPGSSSTSTSGAGPADSVMRQDYRAWKVQRPEPSCRPRSEYQPSDAPFERETQYQKDFRAWPLPRRGDHPWIPKPVQIPAPSQASAPIFGTPKRRPQSQERWPVQIAAEAPEPEAPGETGVLAAGKTSGAEERDTRRKASPAWMVRRSEGHEQTPLPATQAQAGAGGPAAGRATSAEERDSRRKAGPAWMVRRSEGHEQTPLPATQAQAAEGGKGRAAADALNRQIREEVTSAVSSSYRNEFRAWTDIKPVKPIKAKPQYKPPDDKMVHETSYSAQFKGEASKPTAADNKVIDRRRIRSLYSEPFKEPPKVEKPSVQSSKPKKTSATHKPPRKAKDKQVVSGQAAKKKSTEGPSATKPDDKEQSKEMNNKLAEAKESPIQPTDDSCKNKGPVATEPDKDKGPVVSGLLKGQSPMIQEAPKDQGPIVLGLPKDQGPVVLGPPKDQGPVVPWPPKDQGPVVSGHPKDQGPVVPEPPKDQGPVVPEPPKDQGHMVPVPIKDKGHVVPEPLKNEESVISALAKDQSPLIPDPLKNQSPMVPGRLKDQGFVTPALPKDQGSVVLTPVKDQVSMVSASDKDQGLMVPEHWKDQSAMVIAPVKNQGPVVPEFVKSQDPIVPAVTKNQGHMVSEPPKNQGPIIPVPLKDQDPLVPAPAKVQGPVVPETLKTQGPRVPQLPTVSPPPPVMIPTVPHGEYIEGSP