Details from NCBI annotation

Gene Symbol Tsku
Gene Name tsukushi, small leucine rich proteoglycan, transcript variant X6
Entrez Gene ID 101723198

Database interlinks

Part of NW_004624817.1 (Scaffold)

For more information consult the page for NW_004624817.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TSKU ENSCPOG00000000019 (Guinea pig)

Gene Details

tsukushi, small leucine rich proteoglycan

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000016, Guinea pig)

Protein Percentage 92.09%
CDS Percentage 89.83%
Ka/Ks Ratio 0.12032 (Ka = 0.0418, Ks = 0.3475)

TSKU ENSG00000182704 (Human)

Gene Details

tsukushi, small leucine rich proteoglycan

External Links

Gene Match (Ensembl Protein ID: ENSP00000434847, Human)

Protein Percentage 88.1%
CDS Percentage 84.99%
Ka/Ks Ratio 0.07548 (Ka = 0.0663, Ks = 0.8778)

Tsku ENSMUSG00000049580 (Mouse)

Gene Details

tsukushi

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000091713, Mouse)

Protein Percentage 86.72%
CDS Percentage 82.86%
Ka/Ks Ratio 0.08826 (Ka = 0.0762, Ks = 0.863)

Tsku ENSRNOG00000027784 (Rat)

Gene Details

tsukushi, small leucine rich proteoglycan (Tsku), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000029957, Rat)

Protein Percentage 86.69%
CDS Percentage 82.15%
Ka/Ks Ratio 0.09259 (Ka = 0.0813, Ks = 0.8786)

Genome Location

Sequence Coding sequence

Length: 1074 bp    Location: 378553..366101   Strand: -
>XM_004863202.1
ATGCTGTGGCCTCTGCTGCTGTTCCCACTGCTCTTGCTGGCCGTGAGTGGAATGCAGACAACCCGGCCATGCTTCCCTGGTTGCCAGTGTGAGGTGGAGACCTTTGGCCTCTTTGACAGCTTCAGCCTGACCCGAGTGGACTGCAGTGGCCTGGGCCCCCACATTGTGCCTGTGCCCATCCCGCTAGACACAGCCCACCTCGACTTGTCCTCCAACCGGCTGGAGACAGTGAACGAGTCTGTGTTGGCAGGGCCCGGCTATACTACACTGGCCGGCCTGGATCTCAGCCACAACCTACTCACCACCATCTCGCCCACCGCCTTCTCCCGCCTTCGCTACCTGGAGTCTCTGGACCTGAGTCACAATGGCCTGGCAGCCCTTCCCGCTGAGAGCTTCACCAGTTCCCCACTGAGTGACGTGAACCTCAGCCACAACCGGCTCCGGGAGGTCTCAGTGTCTGCCTTCACCACCCACAGCCAGGCACGGGCGCTGCACGTGGACCTCTCTCACAACCTCATTCACCACCTGGTGCCCCAGCCTGCAGGGGCCGGCCTGCCTGTGCCCAGCATTCAGAGTCTGAACCTGGCCTGGAACCGGCTCCATGCTGTGCCTGACCTTCGAGACCTGCCCCTGCGCTACCTGAGCCTGGACGGGAATCCCCTGGCAGCCATTGGCCCAGATGCCTTTGCAGGACTGGCAGGCCTTACACACCTGTCGCTGGCCAGCCTACAGGGTCTCCCCCAGCTGGCACCCCATGGCTTCCGTGAACTGCCCGGCTTGCAGGTCCTGGACCTGTCAGGCAACCCCAAGCTCAAGTGGGCAGGAACAGAGGTGTTCTCAGGCCTGGGCTCACTGCAGGAGCTGGATCTGTCGGGCACAGGACTGGTGCCCCTGCCTGAGGTGCTGTTGCATCGCCTACCTGCGCTGCAGAGTGTCAGTGTGGGCCAGGGGACACAGTGCCGACGCCTGGTGCGGGAGGGCGCCTATCCTCGGCAGCCTGGCTCTAGCCCCAAGGTGGTGCTGCACTGTGGGGATGCCCAGGAACCTGTTGCCAGGGGCCCAGACATTTTGTGA

Related Sequences

XP_004863259.1 Protein

Tsku PREDICTED: tsukushin isoform X6 [Heterocephalus glaber]

Length: 357 aa      View alignments
>XP_004863259.1
MLWPLLLFPLLLLAVSGMQTTRPCFPGCQCEVETFGLFDSFSLTRVDCSGLGPHIVPVPIPLDTAHLDLSSNRLETVNESVLAGPGYTTLAGLDLSHNLLTTISPTAFSRLRYLESLDLSHNGLAALPAESFTSSPLSDVNLSHNRLREVSVSAFTTHSQARALHVDLSHNLIHHLVPQPAGAGLPVPSIQSLNLAWNRLHAVPDLRDLPLRYLSLDGNPLAAIGPDAFAGLAGLTHLSLASLQGLPQLAPHGFRELPGLQVLDLSGNPKLKWAGTEVFSGLGSLQELDLSGTGLVPLPEVLLHRLPALQSVSVGQGTQCRRLVREGAYPRQPGSSPKVVLHCGDAQEPVARGPDIL