Details from NCBI annotation

Gene Symbol Hdac7
Gene Name histone deacetylase 7, transcript variant X6
Entrez Gene ID 101713063

Database interlinks

Part of NW_004624816.1 (Scaffold)

For more information consult the page for NW_004624816.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

HDAC7 ENSCPOG00000006013 (Guinea pig)

Gene Details

histone deacetylase 7

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005427, Guinea pig)

Protein Percentage 94.35%
CDS Percentage 92.36%
Ka/Ks Ratio 0.12139 (Ka = 0.0295, Ks = 0.2428)

HDAC7 ENSG00000061273 (Human)

Gene Details

histone deacetylase 7

External Links

Gene Match (Ensembl Protein ID: ENSP00000080059, Human)

Protein Percentage 90.77%
CDS Percentage 89.13%
Ka/Ks Ratio 0.13416 (Ka = 0.0492, Ks = 0.3667)

Hdac7 ENSMUSG00000022475 (Mouse)

Gene Details

histone deacetylase 7

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000112110, Mouse)

Protein Percentage 90.38%
CDS Percentage 86.75%
Ka/Ks Ratio 0.09956 (Ka = 0.0509, Ks = 0.5111)

Hdac7 ENSRNOG00000008308 (Rat)

Gene Details

Histone deacetylase 7

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000011322, Rat)

Protein Percentage 89.96%
CDS Percentage 86.96%
Ka/Ks Ratio 0.10772 (Ka = 0.0523, Ks = 0.4858)

Genome Location

Sequence Coding sequence

Length: 2931 bp    Location: 4457279..4477653   Strand: +
>XM_004863127.1
ATGGGACTGGGTGACCCTGGCACAGGCTGCCCCTCTCCCTGTGCAGACACACCAGGTTCTCAGACCCAGCCCATGGACTTGCGGGTGGGCCAGCGGCCCACAGTGGAGCCCCCACCAGAGGCCCCGCTACTGGCCCTGCAGCACCCCCAGCGCCTGCAACGCCACCTCTTCCTAGCAGGCCTGCAGCAGCAGCAGCGCTCAGCCGAGCCCATGAGGCTCTCCATGGACCCGCCAATGCCCGAACTGCAGGGCGGGCAGCAGGAGCAAGAGCTGCGACAGCTTCTCAATAAGGACAAGAGCAAGAGAAGTGCTGTAGCTAGCAGTGTAGTCAAGCAGAAACTGGCCGAGGTGATCCTGAAGAAACAGCAGGCAGCCCTGGAGAGGACAGTCCACAGCAACAGTCCCAGCATTCCCTACAGAACTCTCGAGCCCCTGGACACGGAAGGAGCTGCTCGCTCCATGCTCAGCAGCATTCTGCCTCCCATTCCCAGCTTGCCCAGTGACCCCCCTGAACACTTCCCCTTGCGAAAGACAGCCTCTGAGCCCAACCTGAAGCTGCGCTACAAGCCCAAGAAGTCCCTGGAGCGGAGGAAGAACCCACTGCTCAGGAAGGAGAGTGCCCCATCCAGTCTCCGGCGGCGACCTGCAGAGCCCTTCGGAGACTCCTCCCCCAGTAGTAGCAGCACGCCTGCGTCAGGGTGCAGCTCCCCCAATGACAGCGAGCATGGCCCCAACCCTGTCCTGGGCTCCGAGGCGCTCTTGGGCCAGCGGCTGCGGCTGCAGGAGACTTCTCTGGCCCCATTCGCCTTGCCGACAGTGTCCTTGCTGCCCGCAATCACACTGGGGCTGCCCGCCCCCACCAGGGCTGACGGTGACCGCAGGACCCATCCAGGTCTGGGCCCTCGGGGTCCAGTCCTGGGGAGCCCCCATACTCCCCTCTTCCTGCCCCACGGTCTGGAGCCTGAGCCAGGGGGAACCTTGCCCTCTCGCCTGCAGCCCATTCTCCTCTTGGATCCCTCAGTCTCTCATGCCCCCCTGCTGACTGTGCCTGGGCTTGGGCCCCTGCCCTTCCACTTTGCCCAGTCCTTACTGGCCACCGAGCGGCTCTCTGGGTCTGGCCTCCACCGGCCTCTGAGCCGGACTCGCTCAGAGCCCCTGCCCCCAAGTGCCACTGCCCCCCCACTGCTGGGCCCCCTGCAGCCCTGCCTGGAGCAGCTCAAACCTCACTTCCAGCTGATCAAGAGAACAGCCAAGCCAAGTGAGAAGCCGCGGCTACAGCAGATACCCTCGGCTGAGGACTTGGAGACGGATGGCGGGGGAGCCGGCCAGGTGGTAGATGGAGGCCTGGAACACAGGGAGCCGAGCCATAGGCAGCCTGAAGCCAGGGGCCCTGTTCCTCTCCAGCAACACCAGCAGGTGTTGCTCCGGGAGCAGCAGCGTCTGGCTGGGCGGCTGCCCCGGGGAAGCTCTGGGGACTCTGTGCTGCTTCCTCTGGCCCAGGTTGGACACCGCCTCTTGTCCAGGACTCAGTCCTCCCCAGCTGCGCCTGCCTCACTGCCGACCCCAGAGCCCACTTGCCAGGCCCGAGTCCTCTCCAGCTCAGAAACCCCCGCCAAAGCCCTGCCCTTCATCACAGGGCTGGTCTATGACTCCGTAATGCTGAAGCACCAGTGCTCCTGTGGGGACAACAGCCGGCACCCAGAGCACGCCGGCCGCATCCAGAGCATCTGGTCCCGGCTGCAGGAGCGTGGCCTCCGGAGCCAGTGTGAGTGTCTCCGGGGCCGGAAGGCCTCCCTAGAGGAGCTGCAGTCCGTGCACTCTGAGCGGCACATGCTCCTCTATGGCACCAACCCACTCAGCCGCCTCAAACTGGACAACGAGAAGCTGTCAGAGCTCCTGGCACAGCGGATGTTTGTGATGCTGCCCTGTGGTGGGGTTGGGGTGGATACCGACACGATTTGGAATGAGCTACATTCTTCCAATGCAGCCCGTTGGGCTGCTGGCAGTGTCACTGACCTCGCCTTCAAAGTGGCTTCCCGGGAGCTCAAGAATGGCTTTGCTGTGGTGCGGCCTCCAGGACATCATGCAGATCATTCCACGGCTATGGGCTTCTGCTTCTTCAACTCAGTGGCCATTGCCTGCCGGCAGCTGCAACAACAAGGCAAGGCGAACAGGATCCTCATTGTAGACTGGGATGTTCACCATGGCAACGGCACCCAGCAAACCTTTTACCAGGACCCTAGTGTGCTTTACATCTCCCTGCACCGCCACGATGATGGCAACTTCTTCCCCGGCAGTGGGGCTGTGGATGAGGTTGGAGCTGGCAGTGGCGAGGGTTTCAATGTCAATGTGCCCTGGGCTGGAGGCCTAGATCCTCCCATGGGGGATCCAGAATACCTGGCAGCATTCAGGATGGTCGTGATGCCCATCGCCCAAGAGTTCTCTCCCGATCTGGTCCTGGTGTCAGCTGGGTTTGATGCTGCCGAGGGTCACCCAGCACCACTGGGTGGCTACCATGTTTCCGCCAAATGTTTTGGATACATGACACAGCAGCTGATGAACTTGGCAGGAGGTGCAGTGGTGCTGGCCTTGGAGGGTGGCCATGACCTCACAGCCATCTGTGATGCCTCTGAGGCCTGTGTAGCTGCTCTTCTGGGTAACACGGTGGATCCCCTTTCAGAAGAAAGCTGGAAACAGAAACCCAACCTCAATGCCATCCGCTCTCTGGAAGCTGTGATCCGGGTCCACAGTAAATACTGGGGCTGTATGCAGCACCTGGCCTCCTCGCCGGACCTCTGGGCGCCCAGGGTACCAGGGGCTGATGCAGAAGTAGAGGCTGTCACTGCACTGGCATCCCTCTCTGTGGGCATCCTGCCTGAAGACAGGCCCTCGGAGCAACTGGTGGAAGAGGAAGAACCGATGAATCTCTGA

Related Sequences

XP_004863184.1 Protein

Hdac7 PREDICTED: histone deacetylase 7 isoform X6 [Heterocephalus glaber]

Length: 976 aa      View alignments
>XP_004863184.1
MGLGDPGTGCPSPCADTPGSQTQPMDLRVGQRPTVEPPPEAPLLALQHPQRLQRHLFLAGLQQQQRSAEPMRLSMDPPMPELQGGQQEQELRQLLNKDKSKRSAVASSVVKQKLAEVILKKQQAALERTVHSNSPSIPYRTLEPLDTEGAARSMLSSILPPIPSLPSDPPEHFPLRKTASEPNLKLRYKPKKSLERRKNPLLRKESAPSSLRRRPAEPFGDSSPSSSSTPASGCSSPNDSEHGPNPVLGSEALLGQRLRLQETSLAPFALPTVSLLPAITLGLPAPTRADGDRRTHPGLGPRGPVLGSPHTPLFLPHGLEPEPGGTLPSRLQPILLLDPSVSHAPLLTVPGLGPLPFHFAQSLLATERLSGSGLHRPLSRTRSEPLPPSATAPPLLGPLQPCLEQLKPHFQLIKRTAKPSEKPRLQQIPSAEDLETDGGGAGQVVDGGLEHREPSHRQPEARGPVPLQQHQQVLLREQQRLAGRLPRGSSGDSVLLPLAQVGHRLLSRTQSSPAAPASLPTPEPTCQARVLSSSETPAKALPFITGLVYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQSVHSERHMLLYGTNPLSRLKLDNEKLSELLAQRMFVMLPCGGVGVDTDTIWNELHSSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQQGKANRILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGAGSGEGFNVNVPWAGGLDPPMGDPEYLAAFRMVVMPIAQEFSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNTVDPLSEESWKQKPNLNAIRSLEAVIRVHSKYWGCMQHLASSPDLWAPRVPGADAEVEAVTALASLSVGILPEDRPSEQLVEEEEPMNL