Details from NCBI annotation

Gene Symbol Vdr
Gene Name vitamin D (1,25- dihydroxyvitamin D3) receptor, transcript variant X2
Entrez Gene ID 101710294

Database interlinks

Part of NW_004624816.1 (Scaffold)

For more information consult the page for NW_004624816.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

VDR ENSCPOG00000006025 (Guinea pig)

Gene Details

vitamin D (1,25- dihydroxyvitamin D3) receptor

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005439, Guinea pig)

Protein Percentage 85.78%
CDS Percentage 88.47%
Ka/Ks Ratio 0.22375 (Ka = 0.0798, Ks = 0.3569)

VDR ENSG00000111424 (Human)

Gene Details

vitamin D (1,25- dihydroxyvitamin D3) receptor

External Links

Gene Match (Ensembl Protein ID: ENSP00000447173, Human)

Protein Percentage 85.99%
CDS Percentage 86.62%
Ka/Ks Ratio 0.1171 (Ka = 0.0703, Ks = 0.6001)

Vdr ENSMUSG00000022479 (Mouse)

Gene Details

vitamin D receptor

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000023119, Mouse)

Protein Percentage 86.9%
CDS Percentage 86.03%
Ka/Ks Ratio 0.09635 (Ka = 0.0656, Ks = 0.6814)

Vdr ENSRNOG00000008574 (Rat)

Gene Details

vitamin D (1,25- dihydroxyvitamin D3) receptor (Vdr), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000011601, Rat)

Protein Percentage 88.36%
CDS Percentage 85.83%
Ka/Ks Ratio 0.07394 (Ka = 0.0576, Ks = 0.7789)

Genome Location

Sequence Coding sequence

Length: 1302 bp    Location: 4385977..4419848   Strand: +
>XM_004863113.1
ATGGAAGCAATGGGAGCCAGCACTTCCCTACCTGACCCTAGTGACTTTGACCGAAACATGCCCCGGATCTGTGGGGTATGTGGAGACCGAGCCACGGGCTTCCACTTCAACGCTATGACCTGTGAAGGCTGCAAAGGCTTCTTCAGGCGGAGCATGAAGCGGAAGGCACTGTTCACTTGCCCCTTCAATGGGGACTGTCGAATCACCAAAGACAACAGGCGGCACTGCCAGGCCTGCCGGCTCAAGCGCTGTGTGGAAATCGGCATGATGAAGGAGTGCAACATACAAAAGGCAGTTTTTCTCCACATGGTCATCCTGACCGACGAAGAGGTGCAGCGCAAGCGGGAAATGATCCTGAAGCGGAAGGAGGAGGAGGCCTTGAAGGATAGTTTGCGGCCCAAGCTGTCAGAGGAACAGCAGCACATCATCACCATCCTGCTAGAGGCCCACCACAAGACCTATGACCCCACCTACACTGACTTCACCCAGTTCCGGCCTCCAGTCCGAGAGACTAGAGGGAGCTGTCATCCACCGCCCACACCCAGCTTCTCCAGGAACTCCTCCTCATCTGGTTCAGATCTCTATACTGCCTCTCTAGACTTGGTGGAGCCTTCCAACTTCTCCAACCTGGACTTGAATGAAGAAGAAGACTCGGATAACTCTTCTGTGACTCTGGACCTGTCCCAGCTCCCCATGCTGCCTCATTTGGCTGACCTGGTCAGTTATAGCATCCAAAAGGTCATCGGCTTCGCCAAAATGATCCCAGGATTCAGAGATCTCACTGCTGAGGACCAGATTGTGCTGCTTAAGTCAAGTGCCATTGAGGTCATTATGCTGCGCTCCAACCAGTCCTTCAACGTGGAGGACATGTCCTGGGACTGTGGCAACCAAGACTACAAGTACAGTGTCACTGATGTGACCAAAGCTGGACACACGCTGGAGCTGATTGAGCCCCTCATCAAGTTCCAGATGGCGCTGAAGAAGCTGAACTTGCATGAGGAGGAACACGTCCTGCTCATGGCTATCTGCATTGTCTCCCCAGACCGACCTGGGGTGCAGGATCCCAAGCTGGTCGAGGCCATCCAGGACCGACTGTCCAACACGCTGCAGGCCTACATCCACTGCCGCCACCTGCCCCCGGGCAGCCACCAGCTCTACGCCAAGATGATCCAGAAGCTGGCTGACGTGCGCAGCCTCAATGACGAGTACTCCAAGCAGTACCGAACCCTCTCCCTCCAGCCGGAGAACAGCATGAAGCTCACACCCCTTGTGCTCGAGGTGTTTGGCAATGAGATCTCCTAA

Related Sequences

XP_004863170.1 Protein

Vdr PREDICTED: vitamin D3 receptor isoform X2 [Heterocephalus glaber]

Length: 433 aa      View alignments
>XP_004863170.1
MEAMGASTSLPDPSDFDRNMPRICGVCGDRATGFHFNAMTCEGCKGFFRRSMKRKALFTCPFNGDCRITKDNRRHCQACRLKRCVEIGMMKECNIQKAVFLHMVILTDEEVQRKREMILKRKEEEALKDSLRPKLSEEQQHIITILLEAHHKTYDPTYTDFTQFRPPVRETRGSCHPPPTPSFSRNSSSSGSDLYTASLDLVEPSNFSNLDLNEEEDSDNSSVTLDLSQLPMLPHLADLVSYSIQKVIGFAKMIPGFRDLTAEDQIVLLKSSAIEVIMLRSNQSFNVEDMSWDCGNQDYKYSVTDVTKAGHTLELIEPLIKFQMALKKLNLHEEEHVLLMAICIVSPDRPGVQDPKLVEAIQDRLSNTLQAYIHCRHLPPGSHQLYAKMIQKLADVRSLNDEYSKQYRTLSLQPENSMKLTPLVLEVFGNEIS