Sequence details NCBI ID: XM_004863068.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Cacnb3
Gene Name calcium channel, voltage-dependent, beta 3 subunit, transcript variant X1
Entrez Gene ID 101696342

Database interlinks

Part of NW_004624816.1 (Scaffold)

For more information consult the page for NW_004624816.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CACNB3 ENSCPOG00000003277 (Guinea pig)

Gene Details

calcium channel, voltage-dependent, beta 3 subunit

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002962, Guinea pig)

Protein Percentage 98.97%
CDS Percentage 95.66%
Ka/Ks Ratio 0.02644 (Ka = 0.0047, Ks = 0.179)

CACNB3 ENSG00000167535 (Human)

Gene Details

calcium channel, voltage-dependent, beta 3 subunit

External Links

Gene Match (Ensembl Protein ID: ENSP00000301050, Human)

Protein Percentage 99.38%
CDS Percentage 93.87%
Ka/Ks Ratio 0.00881 (Ka = 0.0028, Ks = 0.3125)

Cacnb3 ENSMUSG00000003352 (Mouse)

Gene Details

calcium channel, voltage-dependent, beta 3 subunit

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000003442, Mouse)

Protein Percentage 98.97%
CDS Percentage 92.84%
Ka/Ks Ratio 0.01188 (Ka = 0.0046, Ks = 0.3833)

Cacnb3 ENSRNOG00000012489 (Rat)

Gene Details

calcium channel, voltage-dependent, beta 3 subunit (Cacnb3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000017490, Rat)

Protein Percentage 98.97%
CDS Percentage 92.15%
Ka/Ks Ratio 0.01103 (Ka = 0.0046, Ks = 0.4192)

Genome Location

Sequence Coding sequence

Length: 1455 bp    Location: 3344390..3334943   Strand: -
Raw sequence   
>XM_004863068.1
ATGTATGACGACTCCTACGTGCCCGGGTTTGAGGACTCGGAGGCGGGTTCAGCCGACTCCTATACCAGCCGCCCATCTCTGGACTCAGACGTCTCCCTGGAGGAGGACCGGGAGAGTGCCCGGCGTGAAGTGGAGAGCCAGGCACAGCAGCAGCTCGAGAGGGCCAAGCACAAACCTGTGGCATTTGCTGTGAGGACCAATGTCAGCTACTGTGGCGTACTGGACGAGGAGTGCCCAGTCCAGGGCTCTGGAGTCAACTTTGAGGCCAAAGATTTTCTGCACATTAAAGAGAAGTACAGCAATGACTGGTGGATCGGCAGGCTAGTCAAAGAGGGTGGGGACATCGCCTTCATCCCCAGCCCCCAGCGCCTGGAGAGCATCCGGCTCAAACAGGAGCAGAAGGCCAGGAGATCTGGAAACCCTTCTAGCCTGAGTGACATCGGCAACCGTCGCTCTCCTCCTCCATCTCTAGCCAAGCAGAAGCAAAAGCAGGCAGAACATGTCCCCCCGTACGATGTGGTGCCCTCCATGCGGCCTGTGGTGCTGGTGGGACCCTCTCTAAAAGGTTACGAGGTCACGGACATGATGCAGAAGGCTCTCTTCGACTTCCTCAAACACCGGTTTGATGGCAGGATCTCCATCACTCGCGTCACAGCTGACCTCTCCCTGGCAAAGCGATCTGTGCTCAACAACCCTGGCAAGAGGACCATCATTGAGCGCTCCTCGGCCCGCTCCAGCATTGCTGAAGTACAGAGTGAGATCGAGCGTATATTCGAGCTGGCCAAATCCCTGCAGCTAGTAGTATTGGATGCGGACACCATTAACCACCCAGCACAGCTGGCCAAGACCTCACTGGCTCCCATCATCGTCTTTGTCAAAGTGTCCTCCCCCAAGGTACTCCAGCGGCTCATCCGCTCCAGGGGGAAGTCACAGATGAAGCACCTGACTGTACAGATGATGGCGTATGATAAGTTGGTTCAGTGCCCTCCAGAGTCATTTGATGTGATTCTAGATGAGAACCAGCTAGAAGATGCCTGTGAGCACCTGGCCGAATACCTAGAGGTTTACTGGCGGGCCACCCACCATCCAGCTCCTGGTGCTGGACTTCTGGGCCCTCCCAGTGCCATCCCTGGACTTCAGAACCAGGAGCTGCTGGGGGAGCGAGGAGAGGAGCACTCACCATTGGAGCGGGACAGCTTGATGCCCTCAGACGAGGCCAGCGAGAGCTCCCGCCAGGCCTGGACAGGATCTTCACAGCGTAGTTCCCGCCACCTGGAGGAGGACTATGCAGATGCCTACCAGGACCTGTATCAGCCTCACCGCCAGCACACTTCAGGGCTGCCCAGTGCTAATGGGCATGATCCCCAAGACCGGCTCCTAGCCCAGGACTCGGAGCACAACCACAATGATCGGAACTGGCAGCGCAACCGACCTTGGCCCAAGGATAGCTACTGA

Related Sequences

XP_004863125.1 Protein

Cacnb3 PREDICTED: voltage-dependent L-type calcium channel subunit beta-3 isoform X1 [Heterocephalus glaber]

Length: 484 aa      View alignments
>XP_004863125.1
MYDDSYVPGFEDSEAGSADSYTSRPSLDSDVSLEEDRESARREVESQAQQQLERAKHKPVAFAVRTNVSYCGVLDEECPVQGSGVNFEAKDFLHIKEKYSNDWWIGRLVKEGGDIAFIPSPQRLESIRLKQEQKARRSGNPSSLSDIGNRRSPPPSLAKQKQKQAEHVPPYDVVPSMRPVVLVGPSLKGYEVTDMMQKALFDFLKHRFDGRISITRVTADLSLAKRSVLNNPGKRTIIERSSARSSIAEVQSEIERIFELAKSLQLVVLDADTINHPAQLAKTSLAPIIVFVKVSSPKVLQRLIRSRGKSQMKHLTVQMMAYDKLVQCPPESFDVILDENQLEDACEHLAEYLEVYWRATHHPAPGAGLLGPPSAIPGLQNQELLGERGEEHSPLERDSLMPSDEASESSRQAWTGSSQRSSRHLEEDYADAYQDLYQPHRQHTSGLPSANGHDPQDRLLAQDSEHNHNDRNWQRNRPWPKDSY