Details from NCBI annotation

Gene Symbol Prph
Gene Name peripherin, transcript variant X1
Entrez Gene ID 101714819

Database interlinks

Part of NW_004624816.1 (Scaffold)

For more information consult the page for NW_004624816.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PRPH ENSCPOG00000014881 (Guinea pig)

Gene Details

peripherin

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013409, Guinea pig)

Protein Percentage 97.21%
CDS Percentage 93.85%
Ka/Ks Ratio 0.02257 (Ka = 0.0112, Ks = 0.4952)

PRPH ENSG00000135406 (Human)

Gene Details

peripherin

External Links

Gene Match (Ensembl Protein ID: ENSP00000257860, Human)

Protein Percentage 96.14%
CDS Percentage 92.06%
Ka/Ks Ratio 0.01828 (Ka = 0.0162, Ks = 0.8856)

Prph ENSMUSG00000023484 (Mouse)

Gene Details

peripherin

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000049303, Mouse)

Protein Percentage 95.28%
CDS Percentage 89.63%
Ka/Ks Ratio 0.0223 (Ka = 0.0204, Ks = 0.9154)

Prph ENSRNOG00000015643 (Rat)

Gene Details

peripherin (Prph), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000021010, Rat)

Protein Percentage 96.14%
CDS Percentage 90.41%
Ka/Ks Ratio 0.01862 (Ka = 0.0158, Ks = 0.85)

Genome Location

Sequence Coding sequence

Length: 1401 bp    Location: 2877101..2873690   Strand: -
>XM_004863033.1
ATGAGCCACCACCCGTCGGGCCTCCGGGCCAGCGTGAGCGCCACCTCGTACCGCCGCACCTTCGGGCCCCCGCCCTCCCTGTCCCCCGGGGCCTTCTCCTACTCGTCCAGCTCGCGCTTCTCCGGCAGCCGCCTGCTGGGGTCGGCGTCCCCGAGCTCCTCCGTGCGCCTGGGCAGCTTCCGCGCCCCTCGGGCGGGGGTCCTGCGCCTGCCCTCAGAGCGCCTCGACTTCTCCATGGCCGAGGCCCTCAACCAGGAGTTCCTGGCCACGCGCAGCAACGAGAAGCAGGAGCTACAGGAGCTCAACGACCGCTTCGCCAACTTCATCGAGAAGGTGCGCTTCCTGGAGCAGCAGAACGCGGCCCTGCGCGGCGAGCTGAGCCAGGCCCGGGGCCAGGAGCCGGCGCGCGCCGACCAGCTGTGCCAGCAGGAGCTGCGTGAGCTGCGGCGGGAGCTGGAGCTGCTGGGCCGCGAGCGCGACCGGGTGCAAGTGGAGCGCGACGGGCTGGCCGAGGACCTGGCGGCGCTCAAGCAGAGGCTGGAGGAGGAAACTCGCAAGCGGGAGGATGCGGAGCACAACCTCGTGCTCTTCCGTAAGGATGTGGACGACGCCACCCTGTCCCGTCTGGAACTGGAGCGCAAGATTGAGTCCCTGATGGATGAAATTGAGTTTCTCAAGAAGCTGCATGATGAGGAGCTTCAAGACCTGCAGGTGAGCGTGGAGAGTCAGCAGGTGCAGCACGTGGAGGTCGAGTCGACTGTGAAGCCAGAGCTGACGGCGGCGCTGAGGGACATCCGCGCGCAATACGAGAGCATCGCGGCGAAGAACCTGCAGGAGGCCGAGGAGTGGTACAAGTCCAAGTACGCGGACCTCTCGGATGCCGCCAACCGGAACCACGAGGCCCTGCGCCAGGCCAAGCAGGAGATGAACGAGTCTCGACGGCAGATCCAGAGTCTGACGTGCGAGGTGGATGGGCTGCGCGGCACGAACGAGGCTCTGCTCCGGCAGCTGCGGGAGCTGGAGGAGCAGTTCGCCCTGGAGGCGGGCGGGTACCAGGCCGGCGCCGCGCGGCTCGAGGAGGAGCTGCGCCAGCTCAAGGAGGAGATGGCTCGGCATCTGCGCGAGTACCAGGAACTCCTCAACGTCAAGATGGCCCTGGACATCGAGATCGCCACCTACCGGAAGCTGCTAGAGGGCGAGGAGAGCCGGATCTCCGTGCCCGTCCATTCCTTTGCCTCCTTAAGTATAAAGACGTCTGTGCCTGAGGTGGAGCCAGCCCAGGACAGCCACAGCCGGAAGATGGTTCTGATTAGGACCATAGAGACCCGGGATGGAGAGGTTGTGACGGAGTCTCAAAAGGAACAGCACAGTGAGCTGGACAAGTCTACTCACAGCTACTGA

Related Sequences

XP_004863090.1 Protein

Prph PREDICTED: peripherin isoform X1 [Heterocephalus glaber]

Length: 466 aa      View alignments
>XP_004863090.1
MSHHPSGLRASVSATSYRRTFGPPPSLSPGAFSYSSSSRFSGSRLLGSASPSSSVRLGSFRAPRAGVLRLPSERLDFSMAEALNQEFLATRSNEKQELQELNDRFANFIEKVRFLEQQNAALRGELSQARGQEPARADQLCQQELRELRRELELLGRERDRVQVERDGLAEDLAALKQRLEEETRKREDAEHNLVLFRKDVDDATLSRLELERKIESLMDEIEFLKKLHDEELQDLQVSVESQQVQHVEVESTVKPELTAALRDIRAQYESIAAKNLQEAEEWYKSKYADLSDAANRNHEALRQAKQEMNESRRQIQSLTCEVDGLRGTNEALLRQLRELEEQFALEAGGYQAGAARLEEELRQLKEEMARHLREYQELLNVKMALDIEIATYRKLLEGEESRISVPVHSFASLSIKTSVPEVEPAQDSHSRKMVLIRTIETRDGEVVTESQKEQHSELDKSTHSY