Details from NCBI annotation

Gene Symbol Atf1
Gene Name activating transcription factor 1, transcript variant X3
Entrez Gene ID 101726719

Database interlinks

Part of NW_004624816.1 (Scaffold)

For more information consult the page for NW_004624816.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ATF1 ENSCPOG00000000129 (Guinea pig)

Gene Details

activating transcription factor 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000114, Guinea pig)

Protein Percentage 97.77%
CDS Percentage 95.91%
Ka/Ks Ratio 0.07411 (Ka = 0.0104, Ks = 0.141)

ATF1 ENSG00000123268 (Human)

Gene Details

activating transcription factor 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000262053, Human)

Protein Percentage 94.8%
CDS Percentage 92.69%
Ka/Ks Ratio 0.09177 (Ka = 0.0243, Ks = 0.2645)

Atf1 ENSMUSG00000023027 (Mouse)

Gene Details

activating transcription factor 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000023769, Mouse)

Protein Percentage 89.96%
CDS Percentage 86.12%
Ka/Ks Ratio 0.09128 (Ka = 0.051, Ks = 0.5583)

Atf1 ENSRNOG00000032162 (Rat)

Gene Details

activating transcription factor 1 (Atf1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000052256, Rat)

Protein Percentage 91.79%
CDS Percentage 86.44%
Ka/Ks Ratio 0.07156 (Ka = 0.0414, Ks = 0.5779)

Genome Location

Sequence Coding sequence

Length: 888 bp    Location: 1592445..1530166   Strand: -
>XM_004862978.1
ATGCCGCGCACAGGCCGGTGGGGAGGAGGCCGGCAGTGCCGGAGTCACCGACGCCCCGGGGGTGCCACGGAGTTGATTATGGAAGAGTCCCACAAGAATAACACTTCAGAGACTTCAACTCAACCTGCTTCAACAGTTCAGGGAGCTTATATTTCTCATATTGCTCAGCAGGTTTCGTCTTTATCAGAAAGTGAAGAGTCTCAGGACTCATCTGACAGCATAGGCTCCTCACAGAAAGCTCACGGGATCCTAGCACGCCGTCCATCTTACAGAAAAATTTTGAAAGACCTGTCTTCTGAAGATACACGGAGCAGAAAAGGAGACGGAGAAAACCCCGGAGTTCCTGCTGTCACATCTATGTCTGTTCCAACTCCCATCTATCAGACTAGCAGTGGACAGTACATTGCCATTGCCCCAAATGGAGCCTTACAGTTGGCCAGCCCAGGAACAGATGGTGTGCAGGGACTTCATACATTAACCAGGACCAATTCAGGCAGTACTCAGCAAGGTACAATTCTCCAGTATGCACAGACCTCTGATGGACAGCAAATACTTGTGCCCAGCAACCAGGTGGTTGTACAAACTGCATCAGGAGATATGCAAACATATCAGATCCGTACCACGCCTTCAGCTACTTCACTGCCACAAACTGTGGTGATGACATCTCCGGTAACTCTTACATCTCAGACAACTAAGACAGATGACCCCCAACTGAAGAGAGAAATAAGGCTGATGAAAAATAGAGAAGCTGCTCGAGAATGTCGTAGAAAGAAGAAAGAATATGTGAAATGCCTGGAAAATCGAGTTGCAGTCCTGGAAAATCAAAATAAAACTCTAATAGAAGAGTTAAAAACTTTGAAGGATCTTTATTCTCATAAAAGTGTTTGA

Related Sequences

XP_004863035.1 Protein

Atf1 PREDICTED: cyclic AMP-dependent transcription factor ATF-1 isoform X3 [Heterocephalus glaber]

Length: 295 aa      View alignments
>XP_004863035.1
MPRTGRWGGGRQCRSHRRPGGATELIMEESHKNNTSETSTQPASTVQGAYISHIAQQVSSLSESEESQDSSDSIGSSQKAHGILARRPSYRKILKDLSSEDTRSRKGDGENPGVPAVTSMSVPTPIYQTSSGQYIAIAPNGALQLASPGTDGVQGLHTLTRTNSGSTQQGTILQYAQTSDGQQILVPSNQVVVQTASGDMQTYQIRTTPSATSLPQTVVMTSPVTLTSQTTKTDDPQLKREIRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKTLKDLYSHKSV