Details from NCBI annotation

Gene Symbol Tfcp2
Gene Name transcription factor CP2, transcript variant X3
Entrez Gene ID 101718285

Database interlinks

Part of NW_004624816.1 (Scaffold)

For more information consult the page for NW_004624816.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TFCP2 ENSCPOG00000007923 (Guinea pig)

Gene Details

transcription factor CP2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007133, Guinea pig)

Protein Percentage 98.99%
CDS Percentage 95.44%
Ka/Ks Ratio 0.03188 (Ka = 0.0056, Ks = 0.176)

TFCP2 ENSG00000135457 (Human)

Gene Details

transcription factor CP2

External Links

Gene Match (Ensembl Protein ID: ENSP00000257915, Human)

Protein Percentage 99.2%
CDS Percentage 94.23%
Ka/Ks Ratio 0.02226 (Ka = 0.0049, Ks = 0.2199)

Tfcp2 ENSMUSG00000009733 (Mouse)

Gene Details

transcription factor CP2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000009877, Mouse)

Protein Percentage 94.61%
CDS Percentage 86.76%
Ka/Ks Ratio 0.05487 (Ka = 0.0325, Ks = 0.5927)

Tfcp2 ENSRNOG00000032395 (Rat)

Gene Details

transcription factor CP2 (Tfcp2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000037251, Rat)

Protein Percentage 97.58%
CDS Percentage 88.17%
Ka/Ks Ratio 0.02214 (Ka = 0.0129, Ks = 0.5823)

Genome Location

Sequence Coding sequence

Length: 1509 bp    Location: 1082794..1137052   Strand: +
>XM_004862953.1
ATGGCCTGGGCTCTGAAGCTGCCTCTGGCCGATGAAGTGATCGAATCCGGGCTGGTGCAGGACTTTGATGCCAGCCTGTCCGGGATCGGCCAGGAGCTGGGTGCCGGTGCCTATAGCATGAGTGATGTCCTTGCATTGCCCATTTTTAAACAAGAAGAGTCAAGTCTGCCTCCTGAGAATGAGAATGAAATCCTCCCTTTCCAGTACGTGCTTTGCGCTGCCACCTCTCCAGCAGTGAAGCTCCACGATGAAACGCTGACCTATCTCAATCAAGGACAGTCTTATGAAATCCGAATGCTAGATAATAGGAAACTTGGAGAACTTCCAGAGATTAATGGCAAATTGGTGAAGAGTATATTCCGTGTGGTATTCCATGACAGAAGGCTACAGTACACTGAACATCAGCAGCTGGAGGGCTGGAGGTGGAACCGACCTGGAGATAGAATCCTTGACATAGATATCCCAATGTCTGTGGGTATCATCGATCCTAGGGCTAATCCAACCCAGCTTAATACAGTGGAGTTCCTGTGGGACCCTGCGAAGAGGACATCTGTGTTTATTCAGGTTCACTGTATTAGCACAGAGTTTACTATGAGGAAACATGGTGGAGAAAAGGGGGTGCCATTTCGAGTACAAATTGATACCTTCAAAGAGAACGAAAACGGGGAGTATACTGAGCACTTACACTCAGCCAGCTGCCAGATCAAAGTCTTCAAGCCCAAAGGTGCAGACAGAAAGCAAAAAACAGATAGAGAGAAAATGGAGAAACGAACGCCTCATGAAAAGGAGAAATATCAACCTTCCTATGAGACAACCATACTCACAGAATGTTCTCCATGGCCCGAGATCACATATGTCAATTCCCCGTCACCTGGTTTCAACAGTTCCCATAGCAGTTTTTCTCTTGGGGAAGGGAATGGTTCACCTAACCACCAGCCAGAGCCGCCCCCTCCAGTCACAGATAACCTCTTGCCAACAACCACACCTCAGGAAGCTCAGCAGTGGTTGCATCGAAATCGTTTTTCTACATTCACAAGGCTTTTCACCAACTTCTCAGGGGCAGATTTATTGAAACTAACTAGAGATGATGTGATCCAAATCTGTGGTCCTGCAGATGGAATCAGACTTTTTAATGCATTAAAAGGCCGGATGGTGCGTCCAAGATTAACCATTTACGTCTGTCAGGAATCGTTGCAGTTGAGGGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAACCACAACAGAAACATGAGGATGGAGACTCAAATGTGTACCATGCCATCTACCTAGAAGAATTGACAGCTACTGAGTTGACAGAAAAAATTGCTCAGCTTTTCAGCATTTCTCCTCGCCAGATCAGCCAGATTTACAAGCAGGGGCCAACAGGAATCCATGTGCTCATCAGTGATGAGATGATACAGAACTTTCAGGAAGAAGCCTGTTTTATTCTGGACACAATGAAAGCAGAAACCAATGACAGCTATCATATTATACTGAAGTAG

Related Sequences

XP_004863010.1 Protein

Tfcp2 PREDICTED: alpha-globin transcription factor CP2 isoform X3 [Heterocephalus glaber]

Length: 502 aa      View alignments
>XP_004863010.1
MAWALKLPLADEVIESGLVQDFDASLSGIGQELGAGAYSMSDVLALPIFKQEESSLPPENENEILPFQYVLCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKLGELPEINGKLVKSIFRVVFHDRRLQYTEHQQLEGWRWNRPGDRILDIDIPMSVGIIDPRANPTQLNTVEFLWDPAKRTSVFIQVHCISTEFTMRKHGGEKGVPFRVQIDTFKENENGEYTEHLHSASCQIKVFKPKGADRKQKTDREKMEKRTPHEKEKYQPSYETTILTECSPWPEITYVNSPSPGFNSSHSSFSLGEGNGSPNHQPEPPPPVTDNLLPTTTPQEAQQWLHRNRFSTFTRLFTNFSGADLLKLTRDDVIQICGPADGIRLFNALKGRMVRPRLTIYVCQESLQLREQQQQQQQQQQQQPQQKHEDGDSNVYHAIYLEELTATELTEKIAQLFSISPRQISQIYKQGPTGIHVLISDEMIQNFQEEACFILDTMKAETNDSYHIILK