Details from NCBI annotation

Gene Symbol Pou6f1
Gene Name POU class 6 homeobox 1, transcript variant X4
Entrez Gene ID 101716807

Database interlinks

Part of NW_004624816.1 (Scaffold)

For more information consult the page for NW_004624816.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

POU6F1 ENSCPOG00000019712 (Guinea pig)

Gene Details

POU class 6 homeobox 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000015859, Guinea pig)

Protein Percentage 91.56%
CDS Percentage 91.98%
Ka/Ks Ratio 0.39142 (Ka = 0.0572, Ks = 0.146)

POU6F1 ENSG00000184271 (Human)

Gene Details

POU class 6 homeobox 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000373895, Human)

Protein Percentage 93.69%
CDS Percentage 90.25%
Ka/Ks Ratio 0.13892 (Ka = 0.0432, Ks = 0.3108)

Pou6f1 ENSRNOG00000004595 (Rat)

Gene Details

POU class 6 homeobox 1 (Pou6f1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000006095, Rat)

Protein Percentage 92.03%
CDS Percentage 85.71%
Ka/Ks Ratio 0.07115 (Ka = 0.0453, Ks = 0.6367)

Genome Location

Sequence Coding sequence

Length: 1707 bp    Location: 1058627..1076322   Strand: +
>XM_004862948.1
ATGGATCCTGGAACTGGGTCCGAGTCAACTCTGACCGTCAATGAGCAGGTCATCGTGATGTCGGGCCATGAGACCATCCGAGTGCTGGAAGTGGGCGTAGATGCCCAGCTCCCCGCTGAGGAGGAGGGCAAAGGACCAGAGGGTGTGGCTGCTGAGAACTCCCAGGGCGGGGCCTGTGCTGAAGCCAGTGAGCCTGCTGGTAAAGCTGGGCCAGGCAACCCAGACGCCTCTACAGAGTCAACTGTGAAGTCAATCCCGGGGATCCCTCCGGGCCCTGCCCCTGCCATTGTTACCTTCAGCCAAGCCCCAAGTCAGCCTCAGGCATCGCAGACCCTGACGCCACTGGCGGTACAAGCTGCCCCCCAGGTCTTGACTCAGGAAAACTTAGCCACAGTTCTGACAGGAGTTATGGTTCCAGCAGGGGCAGTTACTCAACCTCTTCTTATCCCCATCAGTATTGCAGGTCAAGTGGCTGGGCAGCAGGGGCTGGCCGTGTGGACAATTCCTACAGCAACTGTGGCTGCCCTCCCAGGACTGACTGCTGCTTCTCCTCCGGGGGGAATTTTCAAGCCACCTTTAGCCGGTCTCCAAGCAGCTGCCGTGCTGAACACCGCTCTCCCGGCACCCGTGCAAGCTGCCCCGCCAGCTCAGGCCTCCTTGCCAGCCCAGCCCCGGCCACCAGCTCAGCCCCAGACGCTGTTCCAGACCCAGCCACTGCTGCAGACCACGCCTGCCATCCTACCGCAGCCCACCGCTGCCACCGCTGCCGCCCCCACCCTCAAGCCAGTGGACACCAGCCCACAGATCACCGTCCAGCCCGCAGGCTTTGCGCTTAGCCCTGGAATCGTCATTGGAACATTTCCATGGGTGGTGAACTCAGCTAGCGTGGCAGCCCCAGCACCAGCTCAAAGCCTGCAGGTCCAGGCTGTGACCCCCCAACTGTTGTTGAATGCCCAGGGCCAGGTGATTGCGACTCTGGCCAGCAGTCCCCTGCCTCCACCCGTGGCCGTCCGGAAGCCAAGCACACCTGAGTCCCCTGCTAAGAGTGAGGTGCAGCCCATCCAGCCCACACCAGCTGCGCCCCCGCCTGCTGTGGTCATTGCCAGCCCAGCTCCGGCAGTCAAGTCATCTGGGTCTGCTCCCGTCCCCATCACCTGCTCAGAGACCCCCACGGTCAGCCAGTTGGTGTCCAAGCCGCATACTCCAAATCTGGATGAGGATGGGATCAACTTAGAAGAGATCCGGGAGTTTGCCAAGAACTTTAAGATCCGGCGGCTCTCCCTGGGCCTTACACAGACCCAGGTGGGCCAGGCTCTGACTGCGACAGAAGGTCCAGCCTACAGCCAGTCAGCCATCTGCCGGTTTGAGAAGCTGGACATCACACCTAAGAGTGCCCAGAAGCTGAAGCCAGTGCTGGAGAAATGGCTGAACGAGGCTGAGCTGCGGAACCAGGAAGGCCAGCAGAACCTGATGGAGTTTGTAGGAGGTGAGCCCTCCAAGAAGCGCAAACGTCGAACTTCCTTCACCCCCCAGGCCATAGAGGCTCTCAATGCCTACTTCGAGAAGAACCCACTGCCCACAGGCCAGGAGATCACGGAGATTGCAAAGGAGCTCAACTACGACCGAGAGGTTGTTCGCGTCTGGTTCTGCAATCGGCGCCAGACACTCAAGAATACCAGCAAGCTGAATGTCTTTCAGATCCCCTAG

Related Sequences

XP_004863005.1 Protein

Pou6f1 PREDICTED: POU domain, class 6, transcription factor 1 isoform X4 [Heterocephalus glaber]

Length: 568 aa      View alignments
>XP_004863005.1
MDPGTGSESTLTVNEQVIVMSGHETIRVLEVGVDAQLPAEEEGKGPEGVAAENSQGGACAEASEPAGKAGPGNPDASTESTVKSIPGIPPGPAPAIVTFSQAPSQPQASQTLTPLAVQAAPQVLTQENLATVLTGVMVPAGAVTQPLLIPISIAGQVAGQQGLAVWTIPTATVAALPGLTAASPPGGIFKPPLAGLQAAAVLNTALPAPVQAAPPAQASLPAQPRPPAQPQTLFQTQPLLQTTPAILPQPTAATAAAPTLKPVDTSPQITVQPAGFALSPGIVIGTFPWVVNSASVAAPAPAQSLQVQAVTPQLLLNAQGQVIATLASSPLPPPVAVRKPSTPESPAKSEVQPIQPTPAAPPPAVVIASPAPAVKSSGSAPVPITCSETPTVSQLVSKPHTPNLDEDGINLEEIREFAKNFKIRRLSLGLTQTQVGQALTATEGPAYSQSAICRFEKLDITPKSAQKLKPVLEKWLNEAELRNQEGQQNLMEFVGGEPSKKRKRRTSFTPQAIEALNAYFEKNPLPTGQEITEIAKELNYDREVVRVWFCNRRQTLKNTSKLNVFQIP