Details from NCBI annotation

Gene Symbol Scn8a
Gene Name sodium channel, voltage gated, type VIII, alpha subunit, transcript variant X5
Entrez Gene ID 101711868

Database interlinks

Part of NW_004624816.1 (Scaffold)

For more information consult the page for NW_004624816.1 (Scaffold)

Genome Location

Sequence Coding sequence

Length: 5790 bp    Location: 631840..499170   Strand: -
>XM_004862932.1
ATGGCAGCGCGGCTGCTTGCACCACCAGGCCCTGATAGTTTCAAGCCGTTTACCCCTGAGTCACTGGCAAACATTGAGAGGCGCATTGCTGAGAGCAAGCTCAAGAAACCACCAAAGGCCGATGGCAGCCATCGGGAAGATGATGAGGACAGCAAGCCCAAACCAAACAGTGACCTGGAAGCAGGGAAGAGTTTGCCTTTCATCTACGGGGATATCCCCCAAGGCCTGGTTGCAGTTCCCCTGGAGGACTTTGACCCATACTATTTGACGCAGAAAACCTTTGTAGTATTAAACAGAGGGAAAACTCTCTTCAGATTTAGTGCCACGCCTGCCTTGTACATTTTAAGTCCTTTTAACCTGATAAGAAGAATAGCTATTAAAATTTTAATACATTCAGTATTTAGCATGATCATTATGTGCACTATTTTGACCAACTGTGTATTCATGACTTTTAGTAACCCTCCTGAGTGGTCGAAGAATGTGGAGTACACATTCACAGGGATTTATACATTCGAATCAGTAGTGAAAATCCTTGCAAGAGGTTTCTGCATAGATGGCTTTACCTTTTTACGGGATCCATGGAACTGGTTAGATTTCAGTGTCATCATGATGGCGTATATAACAGAGTTTGTAAACCTAGGCAATGTTTCAGCTCTGCGCACTTTCAGGGTACTGAGGGCTTTGAAAACTATTTCGGTAATCCCAGGCCTGAAGACAATTGTGGGCGCCCTCATTCAGTCTGTGAAGAAGCTGTCAGATGTGATGATCCTGACAGTATTCTGCCTGAGTGTTTTCGCCCTGATTGGACTGCAGCTGTTCATGGGGAACCTGCGAAACAAGTGTGTTGTGTGGCCCATAAACTTCAACGAGAGCTATCTTGAAAACGGCACCAGAGGCTTTGACTGGGAAGAGTATATCAACAATAAAACAAATTTTTACACAGTTTCTGGCATGCTGGAACCTTTACTCTGTGGGAACAGTTCTGATGCTGGGCAATGCCCAGAGGGATACCAGTGTATGAAAGCAGGAAGGAACCCCAACTATGGTTACACAAGTTTTGACACTTTTAGCTGGGCCTTCTTGGCTTTATTTCGCCTTATGACCCAGGACTACTGGGAAAACTTGTATCAACTGACCTTACGAGCAGCTGGAAAAACATACATGATCTTCTTCGTCTTGGTAATTTTTGTGGGTTCTTTCTATCTGGTGAACTTAATCTTGGCTGTGGTGGCCATGGCTTATGAAGAGCAGAATCAGGCAACACTGGAGGAAGCAGAGCAAAAAGAGGCTGAATTCAAAGCAATGTTAGAGCAACTTAAGAAACAACAGGAAGAGGCACAGGCTGCCGCAATGGCCACTTCGGCCGGCACTGTCTCAGAAGATGCCATCGAGGAAGAAGGTGAAGAAGGGGTTGGCTCTCCTCGGAGCTCATCTGAAATTTCTAAACTCAGTTCAAAAAGTGCCAAAGAAAGACGTAACAGGAGAAAGAAGAGGAAACAGAAGGAACTCTCTGAAGGAGAGGAGAAAGGAGATCCTGAGAAGGTGTTTAAGTCAGAGTCAGAAGATGGTATGAGGAGGAAGGCCTTTCGGCTACCAGACAACAGAATAGGGAGGAAATTTTCCATCATGAATCAGTCACTGCTCAGCATCCCAGGCTCCCCTTTCCTCTCCCGCCACAACAGCAAGAGCAGCATCTTCAGCTTCCGGGGCCCTGGGCGTTTTCGAGATCCTGGCTCTGAGAATGAGTTCGCGGACGACGAGCACAGCACGGTGGAGGAGAGCGAGGGCCGCCGGGACTCGCTGTTCATCCCGATCCGGGCTCGAGAGCGCCGCAGCAAGAATGGGGGAACAACAGAGGTGGAAATTAAGAAGAAAGGCCCTGGATCTCTTTTAGTATCCATGGACCAACTGGCCTCCTATGGACGAAAAGACAGAATCAACAGTATAATGAGTGTTGTTACAAATACACTAGTAGAAGAGCTGGAAGAGTCTCAGAGAAAGTGCCCACCATGCTGGTATAAATTTGCCAACACTTTCCTCATCTGGGAGTGTCACCCCTATTGGATAAAACTGAAAGAGATTGTAAACTTGATTGTTATGGACCCTTTTGTGGACTTGGCCATCACCATCTGCATTGTACTGAACACACTGTTTATGGCAATGGAGCACCATCCTATGACGCCACAGTTTGAACATGTCTTGACTGTAGGAAATCTGGTTTTCACTGGAATTTTCACGGCAGAAATGTTCCTGAAGCTAATAGCCATGGATCCTTACTATTATTTCCAAGAAGGTTGGAATATTTTTGACGGATTTATTGTCTCCCTCAGTTTAATGGAACTGAGTCTAGCAGATGTGGAGGGGCTTTCAGTGCTGCGATCTTTCCGATTGCTCCGAGTCTTCAAATTGGCCAAATCCTGGCCCACCCTGAATATGCTGATCAAGATTATTGGAAATTCAGTGGGTGCCCTGGGTAACCTGACCCTGGTGCTGGCCATTATTGTCTTCATCTTTGCCGTGGTGGGAATGCAGCTCTTTGGGAAAAGCTACAAAGAGTGTGTCTGCAAGATCAACCAGAACTGTGAACTTCCTCGCTGGCACATGCATGACTTTTTCCATTCCTTCCTCATTGTCTTTCGAGTATTGTGCGGGGAGTGGATTGAGACCATGTGGGACTGCATGGAGGTGGCGGGCCAGGCCATGTGCCTCATTGTCTTTATGATGGTCATGGTCATTGGCAACTTGGTGGTGCTGAATCTGTTTCTGGCCTTGCTTCTGAGCTCCTTCAGTGCAGACAACCTGGCAGCCACTGACGATGATGGCGAAATGAACAACCTACAGATCTCAGTCATCCGCATCAAGAAAGGTGTCGCTTGGACCAAACTAAAAGTACATGCCTTTATGCAGGCTCACTTTAAGCAGCATGAGGGGGATGAAGTGAAACCCCTGGATGAGCTGTATGAAAAGAAGGCCAACTGTATCGCCAACCACACTGGTGCAGACATCCATAGGAATGGTGACTTTCAGAAGAATGGCAATGGCACAACCAGTGGCATTGGCAGCAGTGTGGAGAAGTACATCATTGATGAAGACCATATGTCCTTCATCAACAATCCCAACTTGACTGTGCGGGTGCCCATTGCTGTAGGCGAGTCTGATTTTGAGAACCTCAACACAGAAGATGTTAGCAGCGAGTCGGATCCTGAAGGCAGCAAAGATAAATTGGATGACACTAGCTCCTCCGAAGGAAGCACCATTGATATCAAGCCAGAAGTAGAAGAAGTCCCTGTGGAACAGCCCGAGGAGTACTTGGATCCAGATGCCTGCTTCACAGAAGGTTGTGTCCAGCGGTTCAAGTGCTGCCAGGTCAACATTGAAGAAGGGCTGGGCAAGTCTTGGTGGATCCTGCGGAAAACCTGCTTTCTCATCGTAGAGCACAATTGGTTTGAGACCTTCATCATCTTCATGATTCTGCTCAGCAGTGGTGCCCTGGCCTTTGAGGACATCTACATTGAACAGAGGAAGACTATTCGCACTATCCTGGAATACGCTGACAAGGTCTTCACCTACATCTTCATCCTGGAGATGTTGCTCAAGTGGACGGCCTATGGGTTTGTCAAGTTCTTCACCAATGCCTGGTGCTGGCTGGACTTCCTCATCGTGGCTGTCTCTTTAGTCAGCCTTATAGCTAATGCCCTGGGCTACTCGGAACTAGGTGCCATAAAGTCCCTTAGGACCCTAAGAGCTTTGAGACCCTTAAGAGCCTTATCACGATTTGAAGGGATGAGGGTGGTGGTGAATGCCTTGGTGGGTGCCATCCCCTCCATCATGAATGTGCTGCTGGTGTGTCTCATCTTCTGGCTGATTTTCAGCATCATGGGTGTTAACCTGTTTGCCGGAAAGTACCACTTCTGCTTTAATGAGACTTCTGAAATCCGATTCGAAATTGAACATGTTAACAATAAAACTGAGTGTGAAAAGCTGATGGAGGGGAACAACACAGAGATCAGATGGAAGAACGTGAAGATCAACTTCGACAACGTTGGGGCAGGGTATCTGGCCCTTCTTCAAGTAGCAACCTTCAAAGGCTGGATGGACATCATGTATGCAGCCGTAGATTCCCGAAAGCCTGATGAGCAGCCTAAGTATGAGGACAACATCTACATGTATATCTACTTTGTCATCTTCATCATCTTCGGCTCCTTCTTCACCCTGAACCTCTTCATTGGTGTCATCATTGATAACTTCAATCAACAAAAGAAAAAGTTTGGAGGTCAGGACATCTTCATGACTGAGGAACAGAAGAAGTACTACAATGCCATGAAAAAGCTGGGCTCAAAGAAACCACAGAAACCGATTCCCCGTCCTTTGAACAAAATCCAAGGTATCATCTTTGATTTTGTCACTCAACAAGCCTTTGACATTGTTATCATGATGCTCATCTGCCTTAACATGGTGACAATGATGGTAGAGACAGATACTCAGAGCAAGCAGATGGAGAACATTCTCTACTGGATTAATCTGGTCTTTGTCATCTTCTTCACCTGTGAGTGTGTGCTCAAAATGTTTGCCTTGAGGCACTACTACTTCACCATTGGCTGGAACATCTTCGACTTCGTGGTGGTCATCCTCTCCATTGTAGGGATGTTTCTGGCTGATATCATTGAGAAATACTTTGTTTCCCCAACCCTATTCCGAGTCATCCGATTGGCCCGTATTGGGCGCATCTTGCGTCTAATCAAAGGTGCCAAAGGGATTCGTACCCTGCTCTTTGCCTTAATGATGTCCTTGCCTGCCCTGTTCAACATTGGCCTTCTGCTCTTCCTGGTCATGTTCATCTTCTCCATCTTTGGGATGTCCAATTTTGCATACGTGAAGCATGAGGCTGGCATTGATGACATGTTCAACTTTGAGACATTTGGCAACAGCATGATCTGCCTGTTTCAGATCACAACCTCGGCTGGTTGGGATGGCCTGCTGCTCCCCATCCTTAACCGCCCCCCTGACTGCAGCCTGGACAAGGAACACCCAGGGAGTGGCTTTAAGGGAGACTGCGGGAACCCCTCTGTGGGCATCTTCTTCTTTGTAAGCTACATCATCATCTCCTTCTTGATTGTGGTGAACATGTACATTGCCATCATCTTGGAGAACTTCAGTGTAGCTACAGAAGAAAGTGCAGACCCTCTGAGTGAGGATGACTTTGAGACCTTCTATGAGATCTGGGAGAAGTTTGACCCCGACGCCACCCAGTTCATTGAGTACTGTAAGCTGGCAGACTTCGCAGATGCCTTGGAGCATCCTCTCCGAGTCCCCAAGCCCAACACCATTGAGCTCATCGCCATGGATCTTCCAATGGTGAGTGGGGATCGCATTCACTGCTTGGACATCCTTTTTGCCTTCACCAAGCGGGTCTTGGGAGACAGCGGAGAGTTGGACATCCTGCGACAGCAGATGGAGGAGCGGTTCGTGGCATCCAATCCTTCCAAAGTGTCTTACGAGCCAATCACAACCACCCTGCGACGCAAGCAGGAGGAGGTGTCTGCAGTGGTCCTGCAGCGAGCCTACCGGGGACATTTGGCAAGGCGAGGCTTCAGCTGCAAAAAGATGACTTCCAATAAGCTAGAGAATGGAGGCACCCACCAGGAGAAAAAGGAGAGCACCCCATCCACAGCCTCCCTCCCATCCTATGACAGTGTAACTAAACCTGACAAGGAGAAACAGCAGCGGGCAGAGGAAGGAAGAAAGGAAAGAGCCAAAAGACAAAAAGAGGTCAGAGAATCCAAATGTTAG

Related Sequences

XP_004862989.1 Protein

Scn8a PREDICTED: sodium channel protein type 8 subunit alpha isoform X5 [Heterocephalus glaber]

Length: 1929 aa     
>XP_004862989.1
MAARLLAPPGPDSFKPFTPESLANIERRIAESKLKKPPKADGSHREDDEDSKPKPNSDLEAGKSLPFIYGDIPQGLVAVPLEDFDPYYLTQKTFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFSNPPEWSKNVEYTFTGIYTFESVVKILARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVVWPINFNESYLENGTRGFDWEEYINNKTNFYTVSGMLEPLLCGNSSDAGQCPEGYQCMKAGRNPNYGYTSFDTFSWAFLALFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQATLEEAEQKEAEFKAMLEQLKKQQEEAQAAAMATSAGTVSEDAIEEEGEEGVGSPRSSSEISKLSSKSAKERRNRRKKRKQKELSEGEEKGDPEKVFKSESEDGMRRKAFRLPDNRIGRKFSIMNQSLLSIPGSPFLSRHNSKSSIFSFRGPGRFRDPGSENEFADDEHSTVEESEGRRDSLFIPIRARERRSKNGGTTEVEIKKKGPGSLLVSMDQLASYGRKDRINSIMSVVTNTLVEELEESQRKCPPCWYKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEHVLTVGNLVFTGIFTAEMFLKLIAMDPYYYFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKINQNCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDGEMNNLQISVIRIKKGVAWTKLKVHAFMQAHFKQHEGDEVKPLDELYEKKANCIANHTGADIHRNGDFQKNGNGTTSGIGSSVEKYIIDEDHMSFINNPNLTVRVPIAVGESDFENLNTEDVSSESDPEGSKDKLDDTSSSEGSTIDIKPEVEEVPVEQPEEYLDPDACFTEGCVQRFKCCQVNIEEGLGKSWWILRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILEMLLKWTAYGFVKFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYHFCFNETSEIRFEIEHVNNKTECEKLMEGNNTEIRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKPDEQPKYEDNIYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKIQGIIFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFTCECVLKMFALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKHEAGIDDMFNFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCSLDKEHPGSGFKGDCGNPSVGIFFFVSYIIISFLIVVNMYIAIILENFSVATEESADPLSEDDFETFYEIWEKFDPDATQFIEYCKLADFADALEHPLRVPKPNTIELIAMDLPMVSGDRIHCLDILFAFTKRVLGDSGELDILRQQMEERFVASNPSKVSYEPITTTLRRKQEEVSAVVLQRAYRGHLARRGFSCKKMTSNKLENGGTHQEKKESTPSTASLPSYDSVTKPDKEKQQRAEEGRKERAKRQKEVRESKC