Details from NCBI annotation

Gene Symbol Htr1a
Gene Name 5-hydroxytryptamine (serotonin) receptor 1A, G protein-coupled, transcript variant X1
Entrez Gene ID 101718872

Database interlinks

Part of NW_004624815.1 (Scaffold)

For more information consult the page for NW_004624815.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

5HT1A ENSCPOG00000012617 (Guinea pig)

Gene Details

Uncharacterized protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000015001, Guinea pig)

Protein Percentage 92.87%
CDS Percentage 93.27%
Ka/Ks Ratio 0.15309 (Ka = 0.0362, Ks = 0.2366)

HTR1A ENSG00000178394 (Human)

Gene Details

5-hydroxytryptamine (serotonin) receptor 1A, G protein-coupled

External Links

Gene Match (Ensembl Protein ID: ENSP00000316244, Human)

Protein Percentage 90.02%
CDS Percentage 87.73%
Ka/Ks Ratio 0.07813 (Ka = 0.0516, Ks = 0.66)

Htr1a ENSMUSG00000021721 (Mouse)

Gene Details

5-hydroxytryptamine (serotonin) receptor 1A

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000022235, Mouse)

Protein Percentage 87.62%
CDS Percentage 86.03%
Ka/Ks Ratio 0.09114 (Ka = 0.0649, Ks = 0.7121)

Htr1a ENSRNOG00000010254 (Rat)

Gene Details

5-hydroxytryptamine (serotonin) receptor 1A, G protein-coupled (Htr1a), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000013618, Rat)

Protein Percentage 89.07%
CDS Percentage 86.46%
Ka/Ks Ratio 0.07929 (Ka = 0.0568, Ks = 0.7165)

Genome Location

Sequence Coding sequence

Length: 1266 bp    Location: 5816601..5821169   Strand: +
>XM_004862882.1
ATGGATGTGCTCAGCCCTGGCGGGGGCAATAATACTACGTCTCAAGGACCCTTTGGAACAAAAGCCAACGTTACTAGAATTTCTGACGTGACCTTCAGCTACCAAGTGATCACCTCTCTGCTGCTGGGCATGCTCATTTTCTGCGCAGTGCTGGGCAATGCGTGCGTGGTAGCTGCCATCGCCCTGGAGCGCTCCCTCCAGAATGTGGCCAACTATCTCATCGGTTCGCTGGCGGTCACTGACCTCATGGTGTCAGTGCTGGTGCTGCCCATGGCTGCGCTGTACCAGGTGCTCAACAAGTGGACTCTGGGCCAGGTCACCTGCGACCTGTTTATCGCTTTGGACGTGCTGTGCTGCACCTCATCCATCCTGCACTTGTGCGCCATCGCTCTGGACAGGTACTGGGCCATCACGGACCCCATCGACTACGTGAACAAGAGGACGCCCCGGCGCGCCGCTGTGCTCATCTCGCTCACTTGGCTCATTGGCTTCCTCATCTCCATCCCTCCCATGCTGGGCTGGCGCACCCCGGAAGACCGCTCGGACGCCGACGCGTGCACCATCAGCAAGGACCATGGCTACACTATCTACTCCACTTTCGGCGCTTTCTATATCCCTCTGCTGCTCATGCTGGTTCTCTACGGGCGCATTTTTCGAGCCGCGCGCTTCCGCATTCGCAAGACGGTCAAGAAGGTGGAGAAGAAGGGAGTTGACACCCGTCTCGGAACTTCGCTGGTCCCGCCCTCCAAGAGGAGGGTGAACGGGCAGCCAGGTGACAGAGACTGGAGGCGGGGTGTGGAAAACAAGGCCACGGGGGCTCCGTGCGCCAACGGCGCCTTGAGGCAGGGCGACGAAGGCGCCACCCTGGAGGTGATCGAGGTGCACCGCGTGGGCAACTCCAAAGAGCACCTGCCTTTACCGAGGGAGCCCAGTGCTGATCCCGGCGTCCCCACCTCCTTTGAGAGGAAAAATGAGCGAAACGCCGAGGCGAAGCGCAAGATGGCTCTGGCCCGTGAGAGGAAGACAGTGAAGACGCTGGGCATAATCATGGGCACCTTCATCCTCTGCTGGCTTCCCTTTTTCATCGTGGCCCTGGTCCTGCCCTTCTGCGAGAGCAGCTGCCACATGCCCACACTGTTGGGCGCCATAATCAACTGGCTGGGCTACTCCAACTCTCTGCTAAACCCGGTCATTTATGCCTACTTCAACAAGGACTTTCAAAACGCGTTTAAGAAGATCATCAAGTGCAAGTTCTGCCGCCCATGA

Related Sequences

XP_004862939.1 Protein

Htr1a PREDICTED: 5-hydroxytryptamine receptor 1A isoform X1 [Heterocephalus glaber]

Length: 421 aa      View alignments
>XP_004862939.1
MDVLSPGGGNNTTSQGPFGTKANVTRISDVTFSYQVITSLLLGMLIFCAVLGNACVVAAIALERSLQNVANYLIGSLAVTDLMVSVLVLPMAALYQVLNKWTLGQVTCDLFIALDVLCCTSSILHLCAIALDRYWAITDPIDYVNKRTPRRAAVLISLTWLIGFLISIPPMLGWRTPEDRSDADACTISKDHGYTIYSTFGAFYIPLLLMLVLYGRIFRAARFRIRKTVKKVEKKGVDTRLGTSLVPPSKRRVNGQPGDRDWRRGVENKATGAPCANGALRQGDEGATLEVIEVHRVGNSKEHLPLPREPSADPGVPTSFERKNERNAEAKRKMALARERKTVKTLGIIMGTFILCWLPFFIVALVLPFCESSCHMPTLLGAIINWLGYSNSLLNPVIYAYFNKDFQNAFKKIIKCKFCRP