Details from NCBI annotation

Gene Symbol Trim23
Gene Name tripartite motif containing 23
Entrez Gene ID 101714019

Database interlinks

Part of NW_004624815.1 (Scaffold)

For more information consult the page for NW_004624815.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TRIM23 ENSCPOG00000019526 (Guinea pig)

Gene Details

tripartite motif containing 23

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000018623, Guinea pig)

Protein Percentage 98.61%
CDS Percentage 96.81%
Ka/Ks Ratio 0.0529 (Ka = 0.0063, Ks = 0.1199)

TRIM23 ENSG00000113595 (Human)

Gene Details

tripartite motif containing 23

External Links

Gene Match (Ensembl Protein ID: ENSP00000231524, Human)

Protein Percentage 97.74%
CDS Percentage 93.44%
Ka/Ks Ratio 0.03563 (Ka = 0.0103, Ks = 0.288)

Trim23 ENSMUSG00000021712 (Mouse)

Gene Details

tripartite motif-containing 23

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000069371, Mouse)

Protein Percentage 97.65%
CDS Percentage 91.4%
Ka/Ks Ratio 0.03263 (Ka = 0.0138, Ks = 0.4243)

Trim23 ENSRNOG00000012354 (Rat)

Gene Details

tripartite motif-containing 23 (Trim23), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000016647, Rat)

Protein Percentage 98.43%
CDS Percentage 91.45%
Ka/Ks Ratio 0.01704 (Ka = 0.0072, Ks = 0.423)

Genome Location

Sequence Coding sequence

Length: 1725 bp    Location: 4246971..4287316   Strand: +
>XM_004862870.1
ATGGCTGCCCTGGTTGTAAACAAGCCTGGAGCGGGGCTAGACAGTGGTCGACAGGGCAGCCGGGGAACGGCTGTGGTGAAGGTTCTGGAATGTGGAGTCTGTGAAGATGTCTTTTCTTTGCAAGGAGATAAAGTTCCTCGCCTTCTGCTTTGTGGCCACACAGTCTGTCATGACTGTCTCACTCGGTTACCTCTTCATGGAAGAGCAATACGTTGCCCATTTGATCGACAAGTAACAGACCTAGGAGATTCAGGTGTCTGGGGGTTGAAAAAAAATTTTGCTTTATTGGAGCTTTTAGAACGACTGCAGAATGGACATATTGGTCAGTATGGAGCTGCAGAAGAAGCCATTGGCATATCTGGAGAGAGTATCATTCGTTGTGATGAAGATGACGCTCATGTTGCATCTGTATATTGTACTGTGTGTGCAACTCACTTGTGCTCGGAGTGTTCTCAAGTTACTCATTCTACAAAGACCTTAGCAAAGCACAGGCGAGTGCCTCTAGCTGATAAACCTCATGAGAAAACCATGTGCTCTCAGCACCAAGTACATGCCATTGAATTTGTTTGCTTGGAAGAAGGTTGTCAGACCTGCCCACTCATGTGCTGTGTCTGCAAAGAATATGGAAAACATCAAGGTCATAAGCATTCGGTATTGGAACCAGAAGCTAACCAGATCCGAGCATCAATTTTAGATATGGCTCACTGCATACGGACCTTCACTGAAGAAATCTCAGATTATTCTAGAAAATTAGTTGGAATTGTTCAGCACATTGAAGGAGGAGAACAAATAGTAGAAGATGGAATTGGAATGGCTCACACAGAACATGTACCAGGTACTGCAGAGAATGCACGGTCATGTGTCCGGGCTTATTTTTCTGATCTACACGAAACTCTGTGTCGTCAAGAAGAAATGGCTCTAAGTGTTGTTGATGCTCATGTTCGTGAAAAACTGATTTGGCTTAGGCAGCAACAAGAAGATATGACTATTTTGTTGTCTCAAGTTTCAACTGCCTGCCTCCATTGTGAAAAAACTTTGCAGCAGGATGATTGTAGAGTTGTTTTGGCAAAACAGGAAATTACAAGATTATTGGAAACATTGCAGAAACAGCAACAGCAGTTTACAGAGGTTGCAGATCATATTCAGTTGGATGCCAGCATCCCTGTCACTTTTACAAAGGACAATAGAGTTCACATTGGACCCAAAATGGAAATTCGAGTTGTTACATTGGGATTAGATGGTGCTGGAAAAACCACTATTTTGTTTAAGTTAAAACAAGATGAGTTCATGCAGCCCATTCCAACAATTGGTTTTAATGTGGAAACTGTAGAATATAAAAATCTAAAATTCACCATTTGGGATGTAGGTGGAAAACACAAATTAAGACCATTGTGGAAACATTATTACCTCAATACTCAAGCTGTTGTATTTGTTGTTGATAGCAGTCACAGAGACAGAATTAATGAAGCACACAGTGAACTTGCAAAGTTGTTAACAGAAAAAGAACTCCGAGATGCTTTGCTCCTGATTTTTGCCAACAAACAGGATGTCGCTGGAGCTCTGTCAGTAGAAGAAATCACTGAACTTCTCAGTCTCCATAAGCTATGCTGTGGCCGTAGCTGGTATATTCAGGGCTGTGACGCTCGAAGTGGTATGGGCCTGTATGAAGGGCTGGACTGGCTCTCAAGGCAACTTGTAGCTGCTGGGGTATTGGATGTTGCTTGA

Related Sequences

XP_004862927.1 Protein

Trim23 PREDICTED: E3 ubiquitin-protein ligase TRIM23 [Heterocephalus glaber]

Length: 574 aa      View alignments
>XP_004862927.1
MAALVVNKPGAGLDSGRQGSRGTAVVKVLECGVCEDVFSLQGDKVPRLLLCGHTVCHDCLTRLPLHGRAIRCPFDRQVTDLGDSGVWGLKKNFALLELLERLQNGHIGQYGAAEEAIGISGESIIRCDEDDAHVASVYCTVCATHLCSECSQVTHSTKTLAKHRRVPLADKPHEKTMCSQHQVHAIEFVCLEEGCQTCPLMCCVCKEYGKHQGHKHSVLEPEANQIRASILDMAHCIRTFTEEISDYSRKLVGIVQHIEGGEQIVEDGIGMAHTEHVPGTAENARSCVRAYFSDLHETLCRQEEMALSVVDAHVREKLIWLRQQQEDMTILLSQVSTACLHCEKTLQQDDCRVVLAKQEITRLLETLQKQQQQFTEVADHIQLDASIPVTFTKDNRVHIGPKMEIRVVTLGLDGAGKTTILFKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDVGGKHKLRPLWKHYYLNTQAVVFVVDSSHRDRINEAHSELAKLLTEKELRDALLLIFANKQDVAGALSVEEITELLSLHKLCCGRSWYIQGCDARSGMGLYEGLDWLSRQLVAAGVLDVA