Details from NCBI annotation

Gene Symbol Trappc13
Gene Name trafficking protein particle complex 13, transcript variant X1
Entrez Gene ID 101713424

Database interlinks

Part of NW_004624815.1 (Scaffold)

For more information consult the page for NW_004624815.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TRAPPC13 ENSCPOG00000007911 (Guinea pig)

Gene Details

trafficking protein particle complex 13

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007122, Guinea pig)

Protein Percentage 91.85%
CDS Percentage 89.37%
Ka/Ks Ratio 0.13261 (Ka = 0.0403, Ks = 0.304)

TRAPPC13 ENSG00000113597 (Human)

Gene Details

trafficking protein particle complex 13

External Links

Gene Match (Ensembl Protein ID: ENSP00000409231, Human)

Protein Percentage 97.6%
CDS Percentage 93.13%
Ka/Ks Ratio 0.03618 (Ka = 0.0109, Ks = 0.3024)

Trappc13 ENSMUSG00000021711 (Mouse)

Gene Details

trafficking protein particle complex 13

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000022224, Mouse)

Protein Percentage 96.88%
CDS Percentage 88.33%
Ka/Ks Ratio 0.02531 (Ka = 0.0156, Ks = 0.6168)

Trappc13 ENSRNOG00000012124 (Rat)

Gene Details

trafficking protein particle complex 13 (Trappc13), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000016439, Rat)

Protein Percentage 96.64%
CDS Percentage 87.69%
Ka/Ks Ratio 0.03071 (Ka = 0.02, Ks = 0.6515)

Genome Location

Sequence Coding sequence

Length: 1254 bp    Location: 4246684..4211472   Strand: -
>XM_004862868.1
ATGGAAGTAAACCCCCCCAAACAGGATCACTTGCTGGCGTTGAAAGTGATGCGGTTGACTAAGCCTACTTTATTCACCAATATTCCAGTAACATGTGAAGAGAAAGACCTACCAGGAGATCTCTTTAACCAACTGATGAGAGATGATCCTTCAACAGTAAATGGTGCAGAAATTTTAATGTTGGGAGAAATGTTGACTTTACCACAAAATTTTGGGAATATATTTTTGGGAGAGACCTTTTCCAGTTATATCAGTGTTCATAATGATAGTAATCAAGTTGTAAAAGATATACTGGTAAAAGCTGATCTTCAGACAAGTTCTCAGCGTTTAAATCTTTCAGCTTCCAATGCTGCAGTGGCTGAACTTAAACCTGATTGTTGTATTGATGATGTCATACACCACGAAGTAAAGGAAATTGGAACACATATCTTGGTATGTGCCGTGAGTTATACAACTCAGGGTGGAGAAAAAATGTATTTTAGAAAATTCTTCAAATTTCAGGTTCTCAAACCATTGGATGTGAAAACTAAATTTTATAATGCAGAGAGTGACCTCAATTCTGTGACTGATGAAGTATTTCTTGAAGCCCAGATTCAGAATATTACAACCTCACCCATGTTCATGGAGAAAGTGTCATTAGAGCCATCTATAATGTACAGTGTAACAGAATTAAATTCAGTCAACCAAGCTGGAGAATGTGTGTCCACATTTGGGTCAAGAGCATATCTGCAGCCAATGGATACACGCCAGTACTTATATTGTCTAAAACCCAAGAAGGAGTTTGCAGAAAAAGCAGGCATCATTAAAGGAGTAACAGTAATCGGAAAATTGGATATAGTATGGAAAACAAATCTAGGTGAAAGGGGAAGGTTACAAACCAGCCAACTTCAAAGAATGGCTCCAGGTTATGGAGATGTTAGGTTGTCTCTGGAGGCAATCCCAGACACTGTAAACCTAGAAGAACCTTTCCATATTACTTGTAAAATAACAAACTGCAGTGAAAGGACTATGGATCTGGTTTTGGAAATGTATAATACCAATTCTATCCACTGGTGCGGTATTTCAGGAAGACAGCTTGGAAAGCTGCACCCAAGTTCCTCTCTCTGCCTTGCCCTTACTCTGCTGTCTTCAGTACAAGGACTACAAAGCGTCTCCGGCTTAAGACTAACAGACACATTCTTAAAGAGAACATACGAATATGATGACATTGCACAAGTCTGTGTGGTATCTTCAGCCATTAAAGTTGAAAGCTAA

Related Sequences

XP_004862925.1 Protein

Trappc13 PREDICTED: trafficking protein particle complex subunit 13 isoform X1 [Heterocephalus glaber]

Length: 417 aa      View alignments
>XP_004862925.1
MEVNPPKQDHLLALKVMRLTKPTLFTNIPVTCEEKDLPGDLFNQLMRDDPSTVNGAEILMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDILVKADLQTSSQRLNLSASNAAVAELKPDCCIDDVIHHEVKEIGTHILVCAVSYTTQGGEKMYFRKFFKFQVLKPLDVKTKFYNAESDLNSVTDEVFLEAQIQNITTSPMFMEKVSLEPSIMYSVTELNSVNQAGECVSTFGSRAYLQPMDTRQYLYCLKPKKEFAEKAGIIKGVTVIGKLDIVWKTNLGERGRLQTSQLQRMAPGYGDVRLSLEAIPDTVNLEEPFHITCKITNCSERTMDLVLEMYNTNSIHWCGISGRQLGKLHPSSSLCLALTLLSSVQGLQSVSGLRLTDTFLKRTYEYDDIAQVCVVSSAIKVES