Details from NCBI annotation

Gene Symbol Sgtb
Gene Name small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta, transcript variant X3
Entrez Gene ID 101711261

Database interlinks

Part of NW_004624815.1 (Scaffold)

For more information consult the page for NW_004624815.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SGTB ENSCPOG00000007915 (Guinea pig)

Gene Details

small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007126, Guinea pig)

Protein Percentage 98.02%
CDS Percentage 95.93%
Ka/Ks Ratio 0.07231 (Ka = 0.0106, Ks = 0.1469)

SGTB ENSG00000197860 (Human)

Gene Details

small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta

External Links

Gene Match (Ensembl Protein ID: ENSP00000370395, Human)

Protein Percentage 96.05%
CDS Percentage 94.52%
Ka/Ks Ratio 0.1138 (Ka = 0.0202, Ks = 0.1777)

Sgtb ENSMUSG00000042743 (Mouse)

Gene Details

small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000041307, Mouse)

Protein Percentage 95.72%
CDS Percentage 87.72%
Ka/Ks Ratio 0.03264 (Ka = 0.0215, Ks = 0.6572)

Sgtb ENSRNOG00000011937 (Rat)

Gene Details

small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta (Sgtb), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000016129, Rat)

Protein Percentage 96.05%
CDS Percentage 88.27%
Ka/Ks Ratio 0.03328 (Ka = 0.0201, Ks = 0.6049)

Genome Location

Sequence Coding sequence

Length: 915 bp    Location: 4161462..4209577   Strand: +
>XM_004862865.1
ATGTCAACTATCAAGCACCTAGTTTACGCAGTTATTCGTTTCTTGCGGGAACAAAGTCAGATGGATGCTTATACTTCTGATGAACAAGAAAGTTTGGAAGTTGCAATTCAGTGCCTGGAGACGGTTTTTAAGATCAGCCTAGAAGATACACATCTAGCGGTTTCACAGCCTTTGACAGAAATGTTCACAAATTCCTTTTGTAAGAATGACATTCTGCCCCTTGAAAACTTAGTGCCTGAAGATGTGGGAAAAGCTGACCAATTAAAAGATGAAGGTAATAACCACATGAAAGAAGAAAATTATGTTGCTGCGGTGGATTGTTACACACAAGCGATAGAACTGGATCCCAATAACGCAGTTTATTATTGCAACAGGGCTGCTGCACAAAGCAAATTAAGTCACTACACAGATGCAATAAAGGATTGTGAAAAAGCAATAGCAATTGATTCAAAGTACAGCAAGGCCTATGGGAGGATGGGGCTGGCCCTTACTGCCATGAATAAATTTGAAGAAGCAGTTAGAAGTTATCAAAAGGCATTAGATCTTGACCCTGAAAATGATTCCTATAAATCAAATCTGAAAATAGCAGAACAGAAGTTAAGAGAGGTATCTAGTCCTACAGGAACTGGACTGAGCTTTGACATGGCTAGCTTGATAAATAATCCAGCTTTCATTAGTATGGCAGCAAGTTTAATGCAGAACCCTCAAGTTCAACAGCTCATGTCAGGAATGATGACAAATGCCATTGGGGGACCTGCTGCTGGAGTTGGGGGCCTAACTGACCTATCTAGTCTCATCCAAGCGGGACAGCAGTTTGCTCAGCAGATACAACAACAGAATCCTGAACTTATAGAGCAACTGAGAAATCACATCCGGAGCAGATCATTCAGCAGCAGCACTGAAGAACATTCCTGA

Related Sequences

XP_004862922.1 Protein

Sgtb PREDICTED: small glutamine-rich tetratricopeptide repeat-containing protein beta isoform X3 [Heterocephalus glaber]

Length: 304 aa      View alignments
>XP_004862922.1
MSTIKHLVYAVIRFLREQSQMDAYTSDEQESLEVAIQCLETVFKISLEDTHLAVSQPLTEMFTNSFCKNDILPLENLVPEDVGKADQLKDEGNNHMKEENYVAAVDCYTQAIELDPNNAVYYCNRAAAQSKLSHYTDAIKDCEKAIAIDSKYSKAYGRMGLALTAMNKFEEAVRSYQKALDLDPENDSYKSNLKIAEQKLREVSSPTGTGLSFDMASLINNPAFISMAASLMQNPQVQQLMSGMMTNAIGGPAAGVGGLTDLSSLIQAGQQFAQQIQQQNPELIEQLRNHIRSRSFSSSTEEHS