Details from NCBI annotation

Gene Symbol Srek1
Gene Name splicing regulatory glutamine/lysine-rich protein 1, transcript variant X3
Entrez Gene ID 101706949

Database interlinks

Part of NW_004624815.1 (Scaffold)

For more information consult the page for NW_004624815.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SREK1 ENSCPOG00000008925 (Guinea pig)

Gene Details

splicing regulatory glutamine/lysine-rich protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008019, Guinea pig)

Protein Percentage 95.66%
CDS Percentage 94.47%
Ka/Ks Ratio 0.14508 (Ka = 0.0229, Ks = 0.158)

SREK1 ENSG00000153914 (Human)

Gene Details

splicing regulatory glutamine/lysine-rich protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000334538, Human)

Protein Percentage 97.22%
CDS Percentage 94.96%
Ka/Ks Ratio 0.07964 (Ka = 0.0132, Ks = 0.1664)

Srek1 ENSMUSG00000032621 (Mouse)

Gene Details

splicing regulatory glutamine/lysine-rich protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000074196, Mouse)

Protein Percentage 90.18%
CDS Percentage 88.11%
Ka/Ks Ratio 0.10951 (Ka = 0.0491, Ks = 0.4488)

Srek1 ENSRNOG00000032735 (Rat)

Gene Details

splicing regulatory glutamine/lysine-rich protein 1 (Srek1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000049050, Rat)

Protein Percentage 89.66%
CDS Percentage 87.94%
Ka/Ks Ratio 0.11063 (Ka = 0.0502, Ks = 0.4533)

Genome Location

Sequence Coding sequence

Length: 1512 bp    Location: 3682837..3646374   Strand: -
>XM_004862851.1
ATGAACAGCGGCGGCGGCTTCGGTTTGGGCTTAGGCTTTGGCCTTACCCCGACGGCGGTAATTCAGGTGACGAATCTATCGTCGGCGGTGACCAGCGAGCAGATGCGAACGCTTTTTTCCTTCCTAGGAGAAATCGAGGAGCTGCGGCTCTACCCCCCCGACAATGCACCTCTTGCTTTTTCCTCCAAAGTATGTTATGTTAAGTTTCGTGACCCATCAAGTGTTGGTGTGGCCCAGCATCTAACTAACACGGTTTTTATTGACAGAGCTCTGATAGTTGTTCCCTGTGCAGAAGGTAAAATCCCAGAGGAATCCAAAGCCCTCTCTTTATTGGCTCCTGCTCCAACCATGACAAGTCTGATGCCTGGTGCAGGATTGCTTCCTATACCAACTCCAAATCCCTTGACTACACTTGGTGTTTCACTTAGCAGTTTGGGAGCTATACCAGCAGCAGCACTAGATCCTAACATTGCAACACTTGGAGAGATACCACAACCACCACTTATGGGAAATGTAGATCCTTCCAAAATTGATGAAATTAGGAGAACAGTCTATGTTGGAAATTTGAATTCCCAGACAACGACAGCTGATCAACTACTTGAATTTTTTAAACAAGTTGGAGAAGTGAAGTTTGTGCGGATGGCAGGTGATGAGACTCAGCCAACTCGGTTTGCTTTTGTGGAATTTGCAGACCAAAATTCTGTACCAAGGGCCCTTGCTTTTAATGGAGTTATGTTTGGAGACAGGCCACTGAAAATAAATCACTCCAACAATGCAATAGTAAAACCCCCTGAGATGACACCTCAGGCTGCAGCTAAAGAATTAGAAGAAGTAATGAAGCGAGTACGAGAGGCTCAGTCATTTATCTCAGCAGCCATTGAACCAGAGTCTGGAAAGAGCAGTGAAAGAAAAGGCGGTCGATCTCGTTCCCACACTCGCTCAAAGTCCAGGTCTAGCTCAAAATCCCATTCTAGAAGGAAAAGATCACAGTCAAAACACAGGAGTAGATCCCATAACAGATCACGTTCAAGACAGAAGGACAGACGTAGATCTAAGAGCCCACATAAAAAACGCTCTAAATCAAGGGAGAGGCGGAAATCAAGGAGTCGTTCACGTTCACGGGATAGGCGCAGGAGGAGAAGCAGGAGTTCTTCCAAGTCACCAAGAGCGTCAAAAACCATAAAAAGGAAATCTTCCAGGTCTCCATCCCCTAGGAGCAGAAATAAGAAGGATAAAAAGAGAGAAAAAGAAAGGGACCATGTTAGTGAAAAAAGAGAAAGAGAGCGTTCCACCTCTACAAGAAAGAGTTCTAATGATAGAGATGGAAAGGAGAAGCTGGAGAAGAACAGTACTTCAGTTAAAGAGAAGGAGCACAATAAAGAACCAGATTCAAGTGTGGGCAAAGAAGTAGATGATAAGGATACACCAAGGACTGAAGAAAATAAAGTACAGCAAAATGGAAATTGTCAGCCAAATGAAGAAAACCTCTCTACCAAAACAGAAGCAGTATAG

Related Sequences

XP_004862908.1 Protein

Srek1 PREDICTED: splicing regulatory glutamine/lysine-rich protein 1 isoform X3 [Heterocephalus glaber]

Length: 503 aa      View alignments
>XP_004862908.1
MNSGGGFGLGLGFGLTPTAVIQVTNLSSAVTSEQMRTLFSFLGEIEELRLYPPDNAPLAFSSKVCYVKFRDPSSVGVAQHLTNTVFIDRALIVVPCAEGKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLGVSLSSLGAIPAAALDPNIATLGEIPQPPLMGNVDPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESGKSSERKGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSRSRDRRRRRSRSSSKSPRASKTIKRKSSRSPSPRSRNKKDKKREKERDHVSEKRERERSTSTRKSSNDRDGKEKLEKNSTSVKEKEHNKEPDSSVGKEVDDKDTPRTEENKVQQNGNCQPNEENLSTKTEAV