Sequence details NCBI ID: XM_004862831.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Prg4
Gene Name proteoglycan 4
Entrez Gene ID 101697808

Database interlinks

Part of NW_004624814.1 (Scaffold)

For more information consult the page for NW_004624814.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PRG4 ENSG00000116690 (Human)

Gene Details

proteoglycan 4

External Links

Gene Match (Ensembl Protein ID: ENSP00000399679, Human)

Protein Percentage 77.36%
CDS Percentage 83.66%
Ka/Ks Ratio 0.38489 (Ka = 0.141, Ks = 0.3663)

Prg4 ENSMUSG00000006014 (Mouse)

Gene Details

proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000128943, Mouse)

Protein Percentage 72.09%
CDS Percentage 76.56%
Ka/Ks Ratio 0.31885 (Ka = 0.2084, Ks = 0.6536)

Prg4 ENSRNOG00000002385 (Rat)

Gene Details

proteoglycan 4, (megakaryocyte stimulating factor, articular superficial zone protein, camptodactyly, arthropathy, coxa vara, pericarditis syndrome) (Prg4), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000059900, Rat)

Protein Percentage 73.11%
CDS Percentage 78.38%
Ka/Ks Ratio 0.33056 (Ka = 0.1889, Ks = 0.5713)

Genome Location

Sequence Coding sequence

Length: 3129 bp    Location: 7323222..7306190   Strand: -
Raw sequence   
>XM_004862831.1
ATGGTGAGGGTGCAGTACCAGAAAACAACCATGGAGTGGAAAATGCTTCCCATTTTCCTTCTCATTCTTTTTTCATTGTATTATTGTATAATTTTAGATCTATCAAGCTGTGCAGGGAGATGTGGGGAAGGGTATTCTAGAGATGCCACCTGCAACTGTGACTATAATTGTCAACACTACATGGAGTGCTGTCCTGATTTCAAGAAAGTCTGCACCACAGAGCTTTCCTGTAAAGGCCGCTGCTTCGAGTCCTTTGCCCGAGGCAGGGAATGTGACTGCGACACCCAGTGTGAGAAGTATGGCAAGTGCTGTCCAGATTATAGCAGTTTCTGTGCAGAAGTGCACAATCCCACATCACCACCTTCAAAGACTGCACCTCCTCCTCCAAGAGCATCTCAAACCATCAAATCAACCACCAAACGTTCACCCAAATCACCAAAAAAGAAGAAGATTAAGAAAGTTGTAGAATCAGAGGAAATAACAGAAGAACATTCTGTTTCTGAAAACCAAGAGTCTTCCTCCTCCTCTTCTTCCTCTTCAACTATTCGGAAAATCAAGTCTTCCAAAAATTCAGCTGCTAATAGAGAATTACAGAAGAAACCCAAAGTAAAAGATAAGAAGAAAAGAACTCCTAAAAAGGAACCTAACCCAGAACCACCAGTTGTAGATGACACTGGAAGTGGACAGGACAGTGGTGACTCCAAGCCCACCCCAGCTCCTGATGTTGCTACCACCCAACGCAATAAAGTAACCACATCTCCCAAGAGTACAACAGTAAAACCAATAAATCCTAAACCCAGTCTTCCACCTAATTCTGATACAACCAAGGAGACACCTTCATCAGCCAATGAAGAGATAACAGTTGAAACTAAAGAGTCTACTGAAACAAATAAACAGACTTCCACTAGTGCAAAAGAAAAGACAACTTCAGCCGAAGAGACACGGAGTGTCACGGAGAAAACATCTGCTAGAGATTCTGTACCCACATCTGAAGTTCCTGCTAAACCTACATCCAAAGCTGAAACTACAACCAAAGCTTCTGCTGTGACCACCCCCAATAAGCCTACCTCCACAACACTCAAGGAAACAACTCCTACCAGGTCCAAGGGAGCTGGACCTACTACTAAGAAGCCGGTACCCACTACTACCAAGGAACCAGGTCCCACCGCCCCGAAGGAGCCTGCACCAACCAAGGAACCAGTTCCCACCACCCCGAAGGAGCCTGCACCAACCAAGGAACCAGTTCCCACCACCCCGAAGGAGCCTGCACCAACCACGAAGGAGCCTGCACCAACCAAGGAACCAGGTCCCACCGCCCAGAAGAAGCCCGCACCAGCCACCACCAAGGAACCAGGTCCCACCACTCCCAAGGAATCTCCACCCACTACATCCAAAGAGCCACCCCCCACTACGTCTAAGGAGGCAGTCCCCACTACCCCTGAGAAGCCTGCCCCAGCTACTTATATGACATCAGCTCCAACCACCACCATGAAGCCTCCCACTACACCAAACACATCTGTTGAAGCAACTCCTGAGTTTTCTTTAGAACCCACACCAAAAGCTCTTAACGAAAGTCCCAAGGAGCCTGCTATACTGACAACTGAGACTCCTGCAGTGACCAAACCTGAAATGACCACAACAGCTAAAGACAAGACAACAGAAAAAGAAATACATCCTACATCTGAAATTACAACTGATGCACTCAAGATTACAACAAAAGAGACAGCAACTATAGCAGAAAAGTCTGACTCCAAAATAACAAGTACCACCACACAAGTAACATCTACAACTCAAGATACTACACCATTCAAAATTACTTTGAAAGCAACAACTTTTGCACCCAAAGTAACTACTACAACTGAAGAGACTATGAACAAACCTGAAGAAACAACCACTGGACCAAAAGATATACCTACTAATTCTAAAGCAACAACTCCAAAACCTCAGAAGCCAACCAAAGCACCCAAAAAGCCTTCTACCAAAAAGCCAACTAAAGCACCCAAAAAGCCTATTTCTACCAAAAAGCCAAGCATACCTAAAGTGCGAAAACCAAAGACTACACCAACTCCCTCAAAGATGACAACAATGTCTGAAATGAACCCTACCTCTTTGGCAAAATACATAATCCAAACCACCACTAGTCCTAACCAGACTCCACATTCAGAAATAGCTGAAGGAAATCCAAAAAATCCAAATGAAGATGTAGTTGGCACTGAAGGAGAAAAGCTTCACATGATTCCCAGGCCTCATGTGTTAACTCCTATCACTAGTCCAGGCATTGATCACTTAGTGAGACTACCCAATCAAGGGATTAACATCAACTCCATGCTTTCAGATGAGACCAATTTATGCAATGGTAAGCCAGTAGATGGACTGACTACTTTGTACAATGGTACATTAGTTGCATTTCGAGGTCATTATTTCTGGATGCTAAATCCATTCAGACCACCATCTCCAGCTCGAAGAATTACCGAAGTCTGGGGTATCCCTTCCCCCATTGATACTGTTTTTACTAGATGCAATTGTGAAGGAAAAACTTTCTTCTTTAAGGATTCCCAGTACTGGCGTTTCACCAATGATATAAAAGATCCAGGGTATCCTAAATTAATTGCAAAAGGATTTGGAGGACTATCGGGAAAAATAGTGGCAGCTCTTTCAGTAGCTAAATACAAGAACAGACCCGAATCTGTGTATTTTTTCAAGAGAGGTGGTAATATTCAGCAGTATACTTATAAACAGGAGCCTATCAAAAAGTGCACTGGAAGAAGGCCTGCTATAAATTATTCAGTGTATGGAGAACCAGCACAGGTTCGGAGACGTCGCTTTGAACGGGCGGTAGGACCTTCTCAAACACACACCATCAGAATTCACTATTCTCCTGTCAGAGTTGCTTATCAAGACAAAGGTTTCCTCCATAATGAAGTTAAAGTGAGTACAATGTGGAGAGGATTTCCAAATGTGGTTACCTCAGCTATAACACTGCCCAACATTAGAAAACCTGATGGCTATGATTACTATGCCTTTTCTAATGATCAATACTATAACATCGATGTGCCTAGTAGAACAGCAAGAGCAATTACGACTCGTTCTGGGCAGACACTCTCCAAAGTCTGGTACAACTGTCCTTAG

Related Sequences

XP_004862888.1 Protein

Prg4 PREDICTED: proteoglycan 4 [Heterocephalus glaber]

Length: 1042 aa      
>XP_004862888.1
MVRVQYQKTTMEWKMLPIFLLILFSLYYCIILDLSSCAGRCGEGYSRDATCNCDYNCQHYMECCPDFKKVCTTELSCKGRCFESFARGRECDCDTQCEKYGKCCPDYSSFCAEVHNPTSPPSKTAPPPPRASQTIKSTTKRSPKSPKKKKIKKVVESEEITEEHSVSENQESSSSSSSSSTIRKIKSSKNSAANRELQKKPKVKDKKKRTPKKEPNPEPPVVDDTGSGQDSGDSKPTPAPDVATTQRNKVTTSPKSTTVKPINPKPSLPPNSDTTKETPSSANEEITVETKESTETNKQTSTSAKEKTTSAEETRSVTEKTSARDSVPTSEVPAKPTSKAETTTKASAVTTPNKPTSTTLKETTPTRSKGAGPTTKKPVPTTTKEPGPTAPKEPAPTKEPVPTTPKEPAPTKEPVPTTPKEPAPTTKEPAPTKEPGPTAQKKPAPATTKEPGPTTPKESPPTTSKEPPPTTSKEAVPTTPEKPAPATYMTSAPTTTMKPPTTPNTSVEATPEFSLEPTPKALNESPKEPAILTTETPAVTKPEMTTTAKDKTTEKEIHPTSEITTDALKITTKETATIAEKSDSKITSTTTQVTSTTQDTTPFKITLKATTFAPKVTTTTEETMNKPEETTTGPKDIPTNSKATTPKPQKPTKAPKKPSTKKPTKAPKKPISTKKPSIPKVRKPKTTPTPSKMTTMSEMNPTSLAKYIIQTTTSPNQTPHSEIAEGNPKNPNEDVVGTEGEKLHMIPRPHVLTPITSPGIDHLVRLPNQGININSMLSDETNLCNGKPVDGLTTLYNGTLVAFRGHYFWMLNPFRPPSPARRITEVWGIPSPIDTVFTRCNCEGKTFFFKDSQYWRFTNDIKDPGYPKLIAKGFGGLSGKIVAALSVAKYKNRPESVYFFKRGGNIQQYTYKQEPIKKCTGRRPAINYSVYGEPAQVRRRRFERAVGPSQTHTIRIHYSPVRVAYQDKGFLHNEVKVSTMWRGFPNVVTSAITLPNIRKPDGYDYYAFSNDQYYNIDVPSRTARAITTRSGQTLSKVWYNCP