Sequence details NCBI ID: XM_004862821.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Lamc1
Gene Name laminin, gamma 1 (formerly LAMB2)
Entrez Gene ID 101720256

Database interlinks

Part of NW_004624814.1 (Scaffold)

For more information consult the page for NW_004624814.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LAMC1 ENSCPOG00000008195 (Guinea pig)

Gene Details

laminin, gamma 1 (formerly LAMB2)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007369, Guinea pig)

Protein Percentage 93.71%
CDS Percentage 91.3%
Ka/Ks Ratio 0.10605 (Ka = 0.0325, Ks = 0.306)

LAMC1 ENSG00000135862 (Human)

Gene Details

laminin, gamma 1 (formerly LAMB2)

External Links

Gene Match (Ensembl Protein ID: ENSP00000258341, Human)

Protein Percentage 93.28%
CDS Percentage 90.22%
Ka/Ks Ratio 0.09619 (Ka = 0.0348, Ks = 0.3617)

Lamc1 ENSMUSG00000026478 (Mouse)

Gene Details

laminin, gamma 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000027752, Mouse)

Protein Percentage 91.66%
CDS Percentage 86.7%
Ka/Ks Ratio 0.07089 (Ka = 0.0425, Ks = 0.5993)

Lamc1 ENSRNOG00000002680 (Rat)

Gene Details

laminin, gamma 1 (Lamc1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000003605, Rat)

Protein Percentage 91.54%
CDS Percentage 86.25%
Ka/Ks Ratio 0.0688 (Ka = 0.0435, Ks = 0.6319)

Genome Location

Sequence Coding sequence

Length: 4827 bp    Location: 10701483..10574544   Strand: -
Raw sequence   
>XM_004862821.1
ATGAGGGGCAGCGAGTGGGCCGCGCCGGTCCTGCGTCCCCAGAGGCGGCTCTGGCCGGTGCTGGTGGTGCTCGCGGTCGCCGCGGCGTGCGGTGTCCGGGCGGCCATGGACGAGTGCACGGACGAGCGCGGGCGGCCGCAGCGCTGCATGCCAGAATTCGTCAACGCCGCCTTCAACGTGACCGTGGTAGCCACCAACACGTGTGGGACTCCGCCCGAGGAGTACTGTGTACAGACCGGGGTCACCGGGGTGACCAAGTCCTGTCACCTGTGCGACGCCGGGCAGCCCCACCTGCAGCACGGGGCAGCCTTCCTGACAGACTACAACCACCAGGCCGACATCACCTGGTGGCAAAGCCAGACCATGCTGTCCGGGGTGCAGTACCCCAACTCCATCAACCTCACGCTGCACCTGGGAAAAGCATTTGACATCACCTACGTGCGCCTGAAGTTCCACACCAGCCGCCCAGAGAGCTTTGCTATCTACAGGCGCATGCGGGAGGATGGACCTTGGATACCTTACCAGTACTACAGTGGCTCCTGTGAGAACACCTACTCCAAGGCCAGTCGTAGCTTCATCAGGACTGGAGAGAACGAGCAGCAGGCCTTGTGCACTGATGAATTCAGTGACATTTCTCCCCTCACTGGGGGCAATGTGGCTTTCTCAACCCTGGAAGGCAGACCCAGCGCCTACAACTTTGACCACAGCCCTGTGCTGCAGGAATGGGTAACTGCCACTGACGTCAGAGTAACTCTGAATCGTCTGAACACTTTTGGAGATGAAGTGTTTAATGACCCCAAAGTCCTCAAGTCCTATTATTATGCAATCTCTGATTTTGCTGTAGGTGGCAGGTGTAAATGCAATGGACATGCCAGCGAGTGTGTGAAAAATGAATTTGACAAGCTGGTGTGTAACTGCAAACACAACACATATGGAGTAGACTGTGAAAAGTGCCTTCCTTTCTTCAATGACCGGCCATGGAGGAGGGCAACTGCTGAAAGTGCCAGTGAATGCTTGCCCTGTGACTGCAATGGCCGATCAGAGGAGTGCTACTTTGACCCCGAACTATACCGTTCCACTGGCCATGGTGGCCACTGTACCAACTGCCGTGATAACACAGACGGTGCTAACTGTGAGCGATGCCTAGAAAACTTCTTCCGCTTTGGGAACAGTGAAGCCTGCTCTCCATGCCACTGCAGTCCTGTTGGTTCTCTCAGCACACAATGTGATAGTTATGGCAGATGCAGCTGTAAGCCAGGAGTGATGGGTGACAAGTGTGATCGCTGCCACCCTGGATTCCATTCTCTCACTGAGGCAGGATGCAGGCCATGCTCCTGTAATCCTTCTGGCAGCACAGATGAATGTAATGTTGAAACAGGAAGATGTGTTTGCAAAGACAATGTTGAAGGCTTCAATTGTGAGAGATGCAAACCTGGATTTTTTAATCTGGAATCATCCAATCCTAGGGGTTGCACACCCTGCTTCTGCTTTGGACATTCTTCTGTCTGTACAAATGCAGTTGGCTACAGTGTTTATGACATATCTTCTGCCTTTCAGATTGGTGAGGATGGGTGGCATGTGGAACAGAGAGATGGCTCAGAAGCGTCTCTGGAGTGGTCCTCTGAGAGGCAAGATATCTCCGTAATCTCAGATAGCTACTTCCCTAGATACTTCATTGCTCCTGCAAAGTTCTTGGGCAATCAGGTGTTGAGTTATGGTCAAAACCTCTCCTTCTCCTTCCGAGTGGACAGACGAGACACACGCCTCTCCGCAGAAGACCTCCTTCTTGAGGGAGCTGGCTTGAGAGTGTCTGTGCCCTTGATTGCTCAGGGCAATTCCTATCCTAGTGAAACCACTGTGAAGTATGTCTTCAGGCTCCACGAAGCAACAGATTACCCATGGAGGCCTACTCTTACCCCTTTTGAGTTTCAGAAGCTCCTAAACAACTTGACCTCTATCAAGATCCGTGGGACATATAGTGAGAGAAGTGCTGGATATTTGGATGATGTCACCCTGGCAAGTGCTCGTCCTGGGCCTGGGGTCCCTGCAACCTGGGTGGAGTCCTGCACCTGCCCAGTGGGATATGGAGGACAGTTTTGTGAGATGTGCCTCTCAGGTTACAGAAGAGAAACTCCAAGTCTTGGACCATACAGTCCTTGTGTGCTTTGTACCTGCAACGGACACAGTGAGACCTGTGACCCTGAAACAGGTGTGTGTAACTGCAGGGACAACACGGCTGGTCCCCACTGTGAGAAGTGTAGTGATGGCTACTATGGAGACCCAACTGTGGGTACCTCCTCTGACTGCCAGCCTTGTCCGTGTCCTGGAGGCTCAAGTTGTGCTCTTGTTCCCAAGACAAAGGAGGTAGTGTGCACCACCTGTCCGGTTGGCACCACTGGTAAAAGATGTGAGCTCTGTGATGACGGCTACTTTGGAGACCCCCAGGGTAACAGTGGCCCTGTGAGGCTCTGCCGCCCATGCCAGTGCAATGACAACATTGACCCCAACGCAGTGGGAAACTGCAATCGCTTGACGGGAGAGTGTCTAAAATGCATCTATAATACTGCTGGCTTTTATTGTGATCGATGTAAAGATGGATTTTTTGGAAATCCCTTGGCTCCCAATCCAGCAGACAAATGCAAAGCCTGCAGTTGTAACCCATATGGGACGGTGAAGCAGCAGAGGAGCTGCAACCCTGTGACCGGGCAGTGTGAGTGTCTGCCTCACGTGGCTGGCCGCGACTGTGGTGCTTGTGACCCTGGCTTCTACAACCTGCAGAGTGGGCAAGGCTGTGAGAGGTGTGACTGCCATGCTTTGGGTTCCACTAATGGGCAGTGTGACATCCGTTCTGGCCAGTGTGAGTGCCAGCCTGGCATCACTGGTCAACACTGTGAGCGCTGTGAGGTCAACCACTTTGGATTTGGGCCTGAAGGCTGCAAACCTTGTGACTGTCATCCGGAGGGGTCTCTTTCACTCCAGTGCAAAGACGATGGTCGCTGCGAATGCAGAGAAGGCTTTGTGGGAAACCGCTGTGACCAGTGTGAAGAGAACTATTTCTACAATCGGTCTTGGCCTGGCTGCCAGGAGTGTCCAGCTTGTTACCGACTAGTAAAGGATAAGGTTGCTGATCATCGAGTGAAACTCCAGGAATTAGAGAGTCTCATAGCAAACCTTGGAACTGGGGTTGAGATGGTGACAGATCAAGCCTTTGAGGATAGACTAAAGGAAGCAGAGAGAGAGGTTATGGACCTCCTTCGTGAGGCCCAGGATGTCAGAGATGTAGACCAGAACTTGATGGATCGACTTCAGAGAGTGAATAACACCCTGTACAGCCAGGTTAGCCGTTTACAGAATATCCGGAATACCATTGAAGAGACTGGGAGCTTGGCTGAGCAGGCGCGAGCCCGAGTAGAGAGCACAGAGCATCTGATTGAAATCGCTTCCAGAGAACTGGAGAAAGCAAAAGTTGCTGTTGCCAATGTGTCAATCACTCAACCAGAATCAACTGGGGACCCAAACAACATGACTGTCTTGGCAGAGGAGGCCCGAAAACTCGCAGAACGCCATAAACAAGAGGCTGATGACATTGTACGAGTGGCAAAGACAGCCAATGATACATCTACTGAGGCATATAATCTGCTTTTGAGGACCCTGGCAGGAGAAAATCAGACAGCATTTGAGATTGAAGAGCTTAATAGGAAGTATGAACAAGCAAAGAATATCTCACAGGATCTAGAAAAGCAAGCTGCCCGCGTCCATGAGGAGGCTAAGCGGGCAGGTGACAAAGCTGTGGAGATCTATGCCAGTGTGGCTCAGCTGGCCCCTGTGGACTCAGAGACACTGGAGAATGAAGCAAATAAAATAAAGAAAGAAGCTGCCGATTTGGACCGTCTGATTGATCAGAAGTTAAAGGATTATGAGGACCTCAGAGAAGACATGATTGGGAAGGAATTGGAAGTAAAGAAACTTCTGGAGAGTGGAAAAGTTGAGCAGCAGACTGCTGACCAACTCCTGGCCCGTGCTGATGCCGCCAAGGCTCTTGCTGAAGAAGCTGCTAAAAAGGGACGAAATACCTTACAGGAAGCCAATGACATTCTCAACAACCTGAAAGATTTCGATAGACGAGTGAACGATAACAAGACCGCTGCAGAGGAGGCGCTAAGGAGGATTCCCTCCATTGAACAGACCATTGCTGAAGCCGATGAAAAGACTCGGGATGCACGGCTGGCGCTTGGCAGCGCAGCAGCAGATGCCACAGAAGCCAAGAGCAAGGCTTACGAGGCCGAGAGGATCGCGAGTGCAGTCCAGAAGAATGCTACCAGCACCAAGGCAGAAGCGGAACAGACCTTTGCAGAAGTCACAGATCTGGATAAGGAAGTGAATAGTATGTTGAGGCAACTGCAAGAAGCAGAGAGAGAGCTGAAGAGAAAGCAAGATGATGCTAACCAGGACATGATGATGGCCGGGATGGCTTCACAGGCTGCTCAGGAAGCTGAGATCAATGCCAGAAAAGCCAAAAACTCTGTCAACAGCCTCCTCAGCATGATTAACGACCTCTTGGAGCAGCTGGGGCAGCTGGACACAGTGGACCTGAATAAGCTAAATGAGATTGAAGGAACCCTGAGCAAAGCCAAAGATGAAATGAAGGTCAGTGATCTTGATAGGAAAGTGTCAGACCTGGAGAACGAAGCCAAGAAGCAGGAGGCTGCCATTATGGACTATAACCGAGATATCGAGGAGATCATGAAGGACATTCAAAACCTGGAGGACATCAAGAAGACCTTACCATCCGGCTGCTTCAACACCCCATCCATCGAAAAGCCTTAG

Related Sequences

XP_004862878.1 Protein

Lamc1 PREDICTED: laminin subunit gamma-1 [Heterocephalus glaber]

Length: 1608 aa      View alignments
>XP_004862878.1
MRGSEWAAPVLRPQRRLWPVLVVLAVAAACGVRAAMDECTDERGRPQRCMPEFVNAAFNVTVVATNTCGTPPEEYCVQTGVTGVTKSCHLCDAGQPHLQHGAAFLTDYNHQADITWWQSQTMLSGVQYPNSINLTLHLGKAFDITYVRLKFHTSRPESFAIYRRMREDGPWIPYQYYSGSCENTYSKASRSFIRTGENEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDHSPVLQEWVTATDVRVTLNRLNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKNEFDKLVCNCKHNTYGVDCEKCLPFFNDRPWRRATAESASECLPCDCNGRSEECYFDPELYRSTGHGGHCTNCRDNTDGANCERCLENFFRFGNSEACSPCHCSPVGSLSTQCDSYGRCSCKPGVMGDKCDRCHPGFHSLTEAGCRPCSCNPSGSTDECNVETGRCVCKDNVEGFNCERCKPGFFNLESSNPRGCTPCFCFGHSSVCTNAVGYSVYDISSAFQIGEDGWHVEQRDGSEASLEWSSERQDISVISDSYFPRYFIAPAKFLGNQVLSYGQNLSFSFRVDRRDTRLSAEDLLLEGAGLRVSVPLIAQGNSYPSETTVKYVFRLHEATDYPWRPTLTPFEFQKLLNNLTSIKIRGTYSERSAGYLDDVTLASARPGPGVPATWVESCTCPVGYGGQFCEMCLSGYRRETPSLGPYSPCVLCTCNGHSETCDPETGVCNCRDNTAGPHCEKCSDGYYGDPTVGTSSDCQPCPCPGGSSCALVPKTKEVVCTTCPVGTTGKRCELCDDGYFGDPQGNSGPVRLCRPCQCNDNIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACSCNPYGTVKQQRSCNPVTGQCECLPHVAGRDCGACDPGFYNLQSGQGCERCDCHALGSTNGQCDIRSGQCECQPGITGQHCERCEVNHFGFGPEGCKPCDCHPEGSLSLQCKDDGRCECREGFVGNRCDQCEENYFYNRSWPGCQECPACYRLVKDKVADHRVKLQELESLIANLGTGVEMVTDQAFEDRLKEAEREVMDLLREAQDVRDVDQNLMDRLQRVNNTLYSQVSRLQNIRNTIEETGSLAEQARARVESTEHLIEIASRELEKAKVAVANVSITQPESTGDPNNMTVLAEEARKLAERHKQEADDIVRVAKTANDTSTEAYNLLLRTLAGENQTAFEIEELNRKYEQAKNISQDLEKQAARVHEEAKRAGDKAVEIYASVAQLAPVDSETLENEANKIKKEAADLDRLIDQKLKDYEDLREDMIGKELEVKKLLESGKVEQQTADQLLARADAAKALAEEAAKKGRNTLQEANDILNNLKDFDRRVNDNKTAAEEALRRIPSIEQTIAEADEKTRDARLALGSAAADATEAKSKAYEAERIASAVQKNATSTKAEAEQTFAEVTDLDKEVNSMLRQLQEAERELKRKQDDANQDMMMAGMASQAAQEAEINARKAKNSVNSLLSMINDLLEQLGQLDTVDLNKLNEIEGTLSKAKDEMKVSDLDRKVSDLENEAKKQEAAIMDYNRDIEEIMKDIQNLEDIKKTLPSGCFNTPSIEKP