Sequence details NCBI ID: XM_004862811.1 (Coding sequence)

Details from NCBI annotation

Gene Symbol Smg7
Gene Name smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans), transcript variant X1
Entrez Gene ID 101717612

Database interlinks

Part of NW_004624814.1 (Scaffold)

For more information consult the page for NW_004624814.1 (Scaffold)

Genome Location

Sequence Coding sequence

Length: 3651 bp    Location: 10181998..10137548   Strand: -
Raw sequence   
>XM_004862811.1
ATGAGAAATTGGATGTTCTTGCAGATAGTCATTGTGGGAGAAAACGTTTCATTTAAGTCCCAGATGAGGACCGAAAACTTGAAATCAGAAGAACATCTGAAATCAAGTAATATTAGGCAGGCAGAAGTCCTGAAGGCTGACATGACAGATTCTAAGCTGGGTCCAGCTGAGGTCTGGACATCCAGGCAGGCCCTGCAGGACCTGTACCAGAAAATGCTAGTTACTGATTTGGAATATGCTTTAGACAAGAAAGTAGAACAAGATCTCTGGAATCATGCCTTTAAGAATCAGATCACAACACTACAAGGCCAAGCAAAGAATCGAGCAAACCCGAATCGGAGTGAAGTTCAGGCAAACCTTTCTCTGTTCCTAGAGGCAGCTAGTGGCTTCTATACTCAGTTATTACAAGAACTGTGTACAGTGTTTAATGTAGATTTACCATGCCGTGTGAGGTCTTCCCAGTTGGGAATTATCAGCAATAAACAGACGCATACCAGCGCCATAGTGAAGCCACAGTCTAGCTCCTGTTCTTATATCTGCCAGCACTGCCTCGTACACCTTGGAGACATTGCTCGATACAGAAACCAGACCAGCCAGGCAGAGTCCTACTATAGGCATGCAGCTCAGCTTGTCCCCTCCAATGGTCAGCCTTACAATCAGTTGGCTATCTTAGCTTCTTCCAAAGGAGACCATCTGACCACAATTTTCTACTACTGCAGAAGCATCGCTGTGAAGTTCCCTTTCCCAGCTGCCTCCACTAATCTACAAAAAGCACTTTCTAAAGCACTGGAAAGCCGAGATGAGGTGAAAACCAAATGGAGTGTTTCTGACTTTATCAGGGCCTTTATTAAATTCCATGGCCATGTGTACCTGAGTAAGAGCTTGGAAAAGTTGAGGCCTCTTCGAGAGAAATTGGAAGAACAGTTTAAGAGGCTGTTATTCCAGAAAGCTTTCAACTCTCAGCAGTTAGTTCATGTCACTGTCATTAACCTGTTTCAACTTCATCACCTCCGTGACTTTAGCAATGAAACGGAACAGCATAGTTATAGCCAAGATGAGCAGCTATGTTGGACACAGTTGTTGGCCCTCTTTATGTCTTTTCTTGGCATCCTGTGCAAGTGTCCTCTTCAAAATGAGTCTCAGGAGGAGACGTACAATGCCTATCCTCTTCCTGCGGTCAAGGTCTCCATGGACTGGCTGAGACTCAGACCCAGAGTCTTTCAGGAGGCAGTGGTGGATGAAAGACAGTACATTTGGCCCTGGCTCATTTCTCTTCTAAATAGTTTCCATCCCCATGAAGAAGATCTCTCAAGTACTAATGCTACACCACTTCCAGAGGAGTTTGAGTTACAAGGCTTCTTGGCTTTGAGACCTTCTTTCAGGAACTTGGATTTTTCCAAAGGCCATCAGGGTATTACAGGAGTCAAAGGGGGTCAGCAACGACGAATACGACAGCAGCGCTTGATTTCTATAGGCAAATGGATTGCTGATAATCAGCCAAGGTTGATTCAGTGTGAAAATGAGGTAGGGAAATTGTTGTTTATCACAGAAATTCCAGAATTAATACTGGAAGACCCCAGTGAAGCTAAAGAGAACCTTGTTCTTCAAGAACCATCAGTGATAGAGTCGCTGGCTGCTGATGGGAGCCCAGGACTGAAATCAGTGCTGTCTACAGGCCGAAATCTAAGCAACAACTGTGACACCGGAGAGAAACCAGTGGTTACCTTCAAAGAGAACATTAAGCCACGAGAAGTGAACAGAGACCAAGGAAGAAGTTTTCCTCCCAAAGAGGTGAGAAGGGACTGTAGCAAAGGAATAACTATAACTAAGAATGATGGAAAGAAGGACAACAACAAGAGGAAAACTGAATCCAAGAAATGCACCTTAGAAAAGTTACAGGAAACAGGAAAGCAGAATGTGGCAGTGCAGGTAAAATCCCAGACAGAACTAAGAAAAACTCCGGTGTCCGAAGCCAGGAAAACACCTGTAACTCAAACCCCAAGTCAAGCAAGTAACTCCCAGTTCATCCCCATTCATCATCCTGGAGCCTTCCCTCCTCTTCCCAGCCGTCCAGGGTTCCCGCCCCCAACATATGTTATCCCCCCTCCTGTGGCATTTTCTATGGGCTCAGGTTACACCTTCCCAGCTGGTGTTTCTGTCCCAGGAACCTTTCTTCAGTCTGCAGCTCACTCTCCAGCAGGAAACCAGGTGCAAGCTGGGAAACAGTCCCACATTCCTTACAGCCAGCAACGGCCCTCTGGACCAGGGCCAATGAACCAGGGACCTCAACAATCACAGCCACCTTCCCAGCAACCCCTTACACCTTTACCAGCTCAGCCAACAGCACAGTCTTCAAGCCAGTTGCAGGTTCAAGCTCTAGCTCAGCAGCAACAATCCCCTACAAAAGCCGTGCCAGCTTTGGGGAAAAGCCCACCTCACCACTCTGGATTCCAGCAGTATCAACAGGCAGATGCCTCCAAACAGCTGTGGAATCCCCCTCAGGTTCAAGGCCCACTAGGGAAAATCATGCCTGTGAAACAGCCCTACTACCTTCAGACTCAAGACCCTATAAAACTGTTTGAGCCGTCATTGCAACCTCCTGTAATGCAGCAGCAGCCTCTAGAGAAAAAAATGAAGCCTTTTCCCATGGAGCCATATAACCATAATCCCTCAGAAGTCAAGGTCCCAGAATTCTACTGGGATTCTTCCTACAGCATGGCTGATAACAGAGCTGTAATGGCACAGCAAGCAAACATGGACCGCAGGGGCAAACGGTCACCAGGAGTCTTCCGTCCAGAGCAGGATCCTGTCCCCAGGATGCCATTTGAGGACCCCAAGGGCTCCCCTTTGCTTCCTCCGGACCTGTTAAAGAGTCTGGCTGCCTTGGAGGAAGAGGAAGAGCTGATTTTTTCTAACCCTCCTGATCTTTACCCAGCTCTGCTGGGGCCTCTCGCCTCTCTTCCTGGAAGAAGCCTCTTTAAATCCTTGTTGGAGAAGCCTTCAGAGCTCATGTCACATTCATCCTCTTTCCTGTCCCTCACTGGGTTCTCTCTTAATCAGGAAAGATACCCAAATAACGGCATGTTCAATGAGGTATATGGAAAGAACCTGACAGCCAGTTCCAAAGCAGAGCTTAATCCCTCGATGCCCTCCCAGGAAACATCACTGTATTCCCTTTTTGAAGGGACTCCATGGTCCCCATCACTTCCTGCCAGTTCAGATCATTCAACACCAGCCAGCCAGTCTCCTCATTCCTCCAACCCAAGCAGCCTGCCCAGCTCTCCTCCAACACACAACCATAATTCTGTTCCATTCTCCAATTTTGGACCCATTGGGACTCCAGATAACAGGGATAGAAGGACTGCAGATCGGTGGAAAACTGATAAACCAGCCATGGGTGGGTTTGGTGTTGATTATCTCTCAGCAACGTCATCCTCTGAGAGCAGTTGGCATCAGGCCAGCACTCCAATTGGCACCTGGACAGGCCATGGCCCTTCCATGGAGGATTCCTCTGCTGTCCTCATGGAAAGCCTAAAGTCTATCTGGTCCAGTTCCATGATGCATCCTGGACCCTCCGCTCTGGAGCAGTTGTTAATGCAGCAGAAGCAGAAGCAGCAGCGGGGACAAGGCACCATGAACCCTCCACACTGA

Related Sequences

XP_004862868.1 Protein

Smg7 PREDICTED: protein SMG7 isoform X1 [Heterocephalus glaber]

Length: 1216 aa      
>XP_004862868.1
MRNWMFLQIVIVGENVSFKSQMRTENLKSEEHLKSSNIRQAEVLKADMTDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVRSSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEVKTKWSVSDFIRAFIKFHGHVYLSKSLEKLRPLREKLEEQFKRLLFQKAFNSQQLVHVTVINLFQLHHLRDFSNETEQHSYSQDEQLCWTQLLALFMSFLGILCKCPLQNESQEETYNAYPLPAVKVSMDWLRLRPRVFQEAVVDERQYIWPWLISLLNSFHPHEEDLSSTNATPLPEEFELQGFLALRPSFRNLDFSKGHQGITGVKGGQQRRIRQQRLISIGKWIADNQPRLIQCENEVGKLLFITEIPELILEDPSEAKENLVLQEPSVIESLAADGSPGLKSVLSTGRNLSNNCDTGEKPVVTFKENIKPREVNRDQGRSFPPKEVRRDCSKGITITKNDGKKDNNKRKTESKKCTLEKLQETGKQNVAVQVKSQTELRKTPVSEARKTPVTQTPSQASNSQFIPIHHPGAFPPLPSRPGFPPPTYVIPPPVAFSMGSGYTFPAGVSVPGTFLQSAAHSPAGNQVQAGKQSHIPYSQQRPSGPGPMNQGPQQSQPPSQQPLTPLPAQPTAQSSSQLQVQALAQQQQSPTKAVPALGKSPPHHSGFQQYQQADASKQLWNPPQVQGPLGKIMPVKQPYYLQTQDPIKLFEPSLQPPVMQQQPLEKKMKPFPMEPYNHNPSEVKVPEFYWDSSYSMADNRAVMAQQANMDRRGKRSPGVFRPEQDPVPRMPFEDPKGSPLLPPDLLKSLAALEEEEELIFSNPPDLYPALLGPLASLPGRSLFKSLLEKPSELMSHSSSFLSLTGFSLNQERYPNNGMFNEVYGKNLTASSKAELNPSMPSQETSLYSLFEGTPWSPSLPASSDHSTPASQSPHSSNPSSLPSSPPTHNHNSVPFSNFGPIGTPDNRDRRTADRWKTDKPAMGGFGVDYLSATSSSESSWHQASTPIGTWTGHGPSMEDSSAVLMESLKSIWSSSMMHPGPSALEQLLMQQKQKQQRGQGTMNPPH