Details from NCBI annotation

Gene Symbol unclassified transcription discrepancy
Gene Name mRNA
Entrez Gene ID 101714349

Database interlinks

Part of NW_004624814.1 (Scaffold)

For more information consult the page for NW_004624814.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

APOBEC4 ENSCPOG00000008073 (Guinea pig)

Gene Details

apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 4 (putative)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007259, Guinea pig)

Protein Percentage 87.73%
CDS Percentage 90.91%
Ka/Ks Ratio 0.3848 (Ka = 0.0699, Ks = 0.1816)

APOBEC4 ENSG00000173627 (Human)

Gene Details

apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 4 (putative)

External Links

Gene Match (Ensembl Protein ID: ENSP00000310622, Human)

Protein Percentage 76.02%
CDS Percentage 83.56%
Ka/Ks Ratio 0.48926 (Ka = 0.1533, Ks = 0.3133)

Apobec4 ENSMUSG00000055547 (Mouse)

Gene Details

apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 4 (putative)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000069723, Mouse)

Protein Percentage 64.44%
CDS Percentage 75.65%
Ka/Ks Ratio 0.52731 (Ka = 0.2551, Ks = 0.4837)

Apobec4 ENSRNOG00000028089 (Rat)

Gene Details

apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 4 (putative) (Apobec4), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000034180, Rat)

Protein Percentage 65.0%
CDS Percentage 75.65%
Ka/Ks Ratio 0.48824 (Ka = 0.2483, Ks = 0.5085)

Genome Location

Sequence Coding sequence

Length: 1110 bp    Location: 10042088..10057876   Strand: +
>XM_004862802.1
ATGGAACCCTTATACGAGGAATATCTCACACATGGTGGAACAATAGTCAAACCTTATCACTGGTTAAACTTCTCTCTAGACTGCACTAACTGTCCTTACCATATCCGGACAGGTGAGGAAGCAAGAGTTCCCTACACAGAATTTCATCAGGTTTTTGGATTCCCTCATGGGCCAACATATCCTCCAACAAAACACCTCACATTTTATGAACTAAAAACTTCTTCTGGTACCCTGGTGCAAAAAGGCCATGCTAGCAATTGCACCGGGAATGACACCCACCCAGAATCAATGCTATTTGAGATGAACGGTTACCTTGATTCAGCCATACACAGTAATAGCACCATTAAGCATATCATTCTGTATTTAAACAACTTCCCTTGTAATGAAGCTAACCATTGCTGCATCAGCAAAATGTACAATTTCCTGATGATGTATCCAGATATCACTCTTAGTATTTACTTTTCTCAGCTCTATCATACTAAAAGTGAATTTCCTACCTCAGCATGGAACCTCGAAGCTCTCAGAAGCCTGGCCAGCTTATGGCCCCAGGTCACACTGAGTCCAATAAGTGGTATGATTTGGCATTCTCTCCTCAACAACTTTGTTATGGGTGTCTCAGGACCAGCTGCTTTCCAGCCCATTTTAACAGGGAGAGCATTGGCTGACAGACACAATGCATATGAAATCAGTGCCATAACAGGAGTGAAACCTTACTTCACTGATGTTCTTCCCCAGACAAAAGCGAATCAGAACATAAAAGCTCAGGTAGCTTCAGGGAGCTATCCCTTAAGCAATGTCTTTGCAGGACAGTCTTTCCAAGGGACAAAAGGACAACTGCAACACAACCTGACTCCAGACCTCAGAATTCCTGTTGTTTTTGTGCTGGTGCCTTACAGAGATCTACCACCAACCCAGGTTGGTCAAAACCTGCATAAACCCAGGCATGTGGTAAGGCACTTAAATATGCCTCAAATGTCAATCTACGAAAACAAAGACNTCAAAAAACTTCCCATCGGAAGACTAGAGGAGATAGTGGAAATCACAGAACAGTCTGCAAGTAGCAAAGAGGCAGATAAAAAGAAGAGAAGAAACAAAATCTACATTTTATGA

Related Sequences

XP_004862859.1 Protein

unclassified transcription discrepancy PREDICTED: LOW QUALITY PROTEIN: putative C-_U-editing enzyme APOBEC-4 [Heterocephalus glaber]

Length: 369 aa      View alignments
>XP_004862859.1
MEPLYEEYLTHGGTIVKPYHWLNFSLDCTNCPYHIRTGEEARVPYTEFHQVFGFPHGPTYPPTKHLTFYELKTSSGTLVQKGHASNCTGNDTHPESMLFEMNGYLDSAIHSNSTIKHIILYLNNFPCNEANHCCISKMYNFLMMYPDITLSIYFSQLYHTKSEFPTSAWNLEALRSLASLWPQVTLSPISGMIWHSLLNNFVMGVSGPAAFQPILTGRALADRHNAYEISAITGVKPYFTDVLPQTKANQNIKAQVASGSYPLSNVFAGQSFQGTKGQLQHNLTPDLRIPVVFVLVPYRDLPPTQVGQNLHKPRHVVRHLNMPQMSIYENKDXKKLPIGRLEEIVEITEQSASSKEADKKKRRNKIYIL