Details from NCBI annotation

Gene Symbol Colgalt2
Gene Name collagen beta(1-O)galactosyltransferase 2, transcript variant X1
Entrez Gene ID 101713780

Database interlinks

Part of NW_004624814.1 (Scaffold)

For more information consult the page for NW_004624814.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

COLGALT2 ENSCPOG00000003530 (Guinea pig)

Gene Details

collagen beta(1-O)galactosyltransferase 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003190, Guinea pig)

Protein Percentage 95.18%
CDS Percentage 94.38%
Ka/Ks Ratio 0.13562 (Ka = 0.0233, Ks = 0.1715)

COLGALT2 ENSG00000198756 (Human)

Gene Details

collagen beta(1-O)galactosyltransferase 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000354960, Human)

Protein Percentage 94.06%
CDS Percentage 90.9%
Ka/Ks Ratio 0.08587 (Ka = 0.03, Ks = 0.3497)

Colgalt2 ENSMUSG00000032649 (Mouse)

Gene Details

collagen beta(1-O)galactosyltransferase 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000037532, Mouse)

Protein Percentage 92.93%
CDS Percentage 88.96%
Ka/Ks Ratio 0.08215 (Ka = 0.0368, Ks = 0.4477)

Colgalt2 ENSRNOG00000028207 (Rat)

Gene Details

collagen beta(1-O)galactosyltransferase 2

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000034843, Rat)

Protein Percentage 92.74%
CDS Percentage 87.21%
Ka/Ks Ratio 0.08326 (Ka = 0.0458, Ks = 0.5505)

Genome Location

Sequence Coding sequence

Length: 1872 bp    Location: 9631471..9736634   Strand: +
>XM_004862800.1
ATGGCTGCGCGCCCCGCCGCCACCCTCGCCTGCTCGCTGCTGCTTCTGTCCTCGGCCCTGCTCCGCGGCGGCTGCCGGGCGCACTTGACCGCTGAGCCGGACTCAGAGCACGAGGAGGCGGTTTTGCCAGAGTCGCCCCTGCAGAGACCCACGGTGCTGGTGGCCATCCTCGCCCGCAACGCTGCGCACACGCTGCCTCACTTCCTCGGCTGCCTGGAGCGGCTGGACTACCCCAAGAGCAGGACGGCCATCTGGGCAGCCACTGATCACAATGTGGATAATACAACCGAAATACTCAGGGAGTGGCTGAAAAATGTACAAGGACTCTATCACTATGTGGAGTGGAGGCCGATGAATGAACCAGAGTCTTATCCTGATGAGACTGGGCCCAAGCACTGGCCAAGCTCCCGGTTTGCCCATGTCATGAAACTCCGACAGGCGGCCCTTCGAACTGCGCGGGAGAAATGGTCAGACTACATTCTGTTCATAGATGTCGACAACTTCCTGACTAACCCACAGACTCTGAACCTAATGATTGCAGAAAACAAAACCATTGTGGCACCCATGCTGGAGTCTCGGGGCCTGTACTCTAACTTCTGGTGTGGAATCACACCTCAGGGCTTCTATAAACGGACCCCAGACTACCTTCAGATTAGAGAATGGAAGAGGATGGGCTGCTTTCCTGTCCCCATGGTCCACTCCACCTTCCTAATTGACCTCAGGAAGGAGGCCTCTGACAAGCTGACCTTCTACCCCCCACACCAGGACTACACCTGGACTTTTGATGACATCATCGTCTTTGCCTTCTCCAGCAGGCAAGCAGGCATTCAGATGTACCTCTGCAACAGACAGCACTATGGCTACCTGCCTATCCCCCTGAAGCCCCACCAGACACTGCAGGAGGACATCGAGAACCTCATCCACGTGCAGATAGAAGCAATGATTGACCGTCCTCCAATCGAACCCTCCCAGTTTGTGTCAGTGGTCCCTAAGTATCCAGACAAGATGGGATTTGACGAGATCTTCATGATTAACCTCAAACGCAGAAAGGACAGGCGGGACCGGATGCTGCGCACACTTTATGAGCAGGAGATCGAGGTCAAGATTGTGGAGGCAGTGGACGGGAAGGCACTCAACACAAGCCAGCTGAAGGCCTTGAACATTGAAATGCTGCCAGGTTATCAAGATCCCTACTCCTCCAGGCCTTTAACCAGAGGTGAAATTGGCTGCTTTCTTAGCCATTACTCTGTCTGGAAAGAGGTAATTGACCGAGAACTGGAGAAGACTCTTGTTATTGAGGATGATGTGCGTTTTGAACATCAGTTCAAGAAGAAGCTGATGAAGCTGATGGATGACATCGATCGGGCTCAGCTGGACTGGGAATTGATTTACATTGGTAGGAAGAGGATGCAAGTAAAAGAGCCAGAGAAAGCAGTACCCAATGTAGTAAATCTGGTCGAAGCCGACTATTCCTATTGGACCTTGGGCTATGCCATCTCTCTGGAAGGAGCACAGAAGCTAGTTGGAGCTAATCCTTTTGGGAAGATGCTGCCAGTGGATGAGTTTTTGCCAATCATGTACAACAAGCATCCTGTAGCCGAGTACAAGGAGTATTATGAATCCAGGGACTTGAAAGCCTTCTCTGCAGAACCCTTGCTCATCTACCCCACGCACTACACAGGCCAGCCAGGCTACTTGAGTGATACAGAGACGTCAACCATCTGGGACAACGAGACAGTGGCAACTGACTGGGACAGGACACATTCCTGGAAGTCACGGAAGCAAGGTCACATCCACAGCAACGCCAAGAATACAGAGGCACTGCCGTCACCAACTTCTCTGGACACTGTGCCCTCAAAGGACGAGCTCTAA

Related Sequences

XP_004862857.1 Protein

Colgalt2 PREDICTED: procollagen galactosyltransferase 2 isoform X1 [Heterocephalus glaber]

Length: 623 aa      View alignments
>XP_004862857.1
MAARPAATLACSLLLLSSALLRGGCRAHLTAEPDSEHEEAVLPESPLQRPTVLVAILARNAAHTLPHFLGCLERLDYPKSRTAIWAATDHNVDNTTEILREWLKNVQGLYHYVEWRPMNEPESYPDETGPKHWPSSRFAHVMKLRQAALRTAREKWSDYILFIDVDNFLTNPQTLNLMIAENKTIVAPMLESRGLYSNFWCGITPQGFYKRTPDYLQIREWKRMGCFPVPMVHSTFLIDLRKEASDKLTFYPPHQDYTWTFDDIIVFAFSSRQAGIQMYLCNRQHYGYLPIPLKPHQTLQEDIENLIHVQIEAMIDRPPIEPSQFVSVVPKYPDKMGFDEIFMINLKRRKDRRDRMLRTLYEQEIEVKIVEAVDGKALNTSQLKALNIEMLPGYQDPYSSRPLTRGEIGCFLSHYSVWKEVIDRELEKTLVIEDDVRFEHQFKKKLMKLMDDIDRAQLDWELIYIGRKRMQVKEPEKAVPNVVNLVEADYSYWTLGYAISLEGAQKLVGANPFGKMLPVDEFLPIMYNKHPVAEYKEYYESRDLKAFSAEPLLIYPTHYTGQPGYLSDTETSTIWDNETVATDWDRTHSWKSRKQGHIHSNAKNTEALPSPTSLDTVPSKDEL