Sequence details NCBI ID: XM_004862786.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Tpr
Gene Name translocated promoter region, nuclear basket protein, transcript variant X2
Entrez Gene ID 101706333

Database interlinks

Part of NW_004624814.1 (Scaffold)

For more information consult the page for NW_004624814.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TPR ENSCPOG00000019790 (Guinea pig)

Gene Details

translocated promoter region, nuclear basket protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000019843, Guinea pig)

Protein Percentage 94.64%
CDS Percentage 92.99%
Ka/Ks Ratio 0.13127 (Ka = 0.0319, Ks = 0.2429)

TPR ENSG00000047410 (Human)

Gene Details

translocated promoter region, nuclear basket protein

External Links

Gene Match (Ensembl Protein ID: ENSP00000356448, Human)

Protein Percentage 96.49%
CDS Percentage 92.61%
Ka/Ks Ratio 0.04697 (Ka = 0.016, Ks = 0.3402)

Tpr ENSMUSG00000006005 (Mouse)

Gene Details

translocated promoter region

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000117616, Mouse)

Protein Percentage 93.34%
CDS Percentage 87.59%
Ka/Ks Ratio 0.04943 (Ka = 0.0325, Ks = 0.6579)

Tpr ENSRNOG00000002394 (Rat)

Gene Details

translocated promoter region, nuclear basket protein (Tpr), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000062172, Rat)

Protein Percentage 93.77%
CDS Percentage 87.65%
Ka/Ks Ratio 0.04827 (Ka = 0.0313, Ks = 0.6476)

Genome Location

Sequence Coding sequence

Length: 7089 bp    Location: 7249245..7306239   Strand: +
Raw sequence   
>XM_004862786.1
ATGGCGGCTGTGTTGCAGCAGGTCCTGGAGCGTACGGAGCTGAGCAAGCTGCCCAAGTCGGTCCAGAACAAACTTGAAAAGTTCCTTGCTGATCAGCAGTCCGAGATCGATGGCCTGAAGGGGCGGCACGAGAAATTTAAGGTGGAAAGCGAACAACAGTACTTTGAGATAGAGAAAAGGTTATCCCACAGTCAGGAGAGACTTGTGAATGAAACCCGTGAGTGCCAAAGTTTGCGACTTGAGCTTGAGAAACTCAACAATCAACTGAAGGCACTAACTGAGAAAAACAAAGAATTAGAAATTGCTCAGGATCGCAGCATCACCATTCAGAGCCAATTTACAAGAACAAAGGAAGAATTAGAAGCTGAGAAAAGAGACTTAATTAGAACCAATGAGAGACTATCTCAAGAACTTGAATACTTAACAGAGGATGTTAAACGGTTAAATGAAAAACTTAAAGAAAGCAGTGCAACAAAGAGTGAACTTCAGCTAAAATTAGATGAACTTCAAGCTTCTGATGTTTCCATTAAGTATCGAGAAAAACGCTTAGAGCAAGAGAAGGAATTGCTACATAGTCAAAATACATGGCTGAATACAGAGTTGAAAACCAAAACTGATGAACTTCTGGCTCTTGGAAGAGAAAAAGGAAATGAGATTCTAGAGCTTAAGTGTAATCTTGAAAACAAAAAAGAGGAGGTTTCAAGACTAGAAGAACAGATGAATGGCTTAAAAACATCAAATGAGCATCTTCAAAAGCATGTAGAGGATTTGTTGACTAAATTAAAAGAGGCCAAGGAACAACAGGCAAGCATGGAAGAGAAATTCCACAATGAGTTAAATGCTCACATAAAACTCTCTAATCTGTACAAGAGTGCTGCAGATGACTCAGAGGCAAAGAGCAATGAACTAACAGGGGCAGTGGATGAACTACACAAACTTTTGAAAGATGCTGGAGAAGCTAACAAAGCAATACAAGATCATCTTCTAGAGGTGGAGAAATCTAAAGATCAAATGGAAAAAGAAATGCTTGAAAAAATAGGGAAATTGGAGAAGGAATTGGAAAATGCAAATGACCTGCTTTCTGCCACAAAACGTAAAGGGGCTATATTATCAGAAGAAGAACTTGCAGCCCTGTCTCCCACTGCAGCAGCTGTAGCTAAGATAGTGAAACCTGGCATGAAATTAACTGAGCTGTATAATGCTTATGTTGAAACTCAGGATCAGTTGCTTTTGGAAAAACTGGAGAACAAAAGAATTAATAAATATCTAGATGAAATAGTGAAAGAAGTTGAAGCCAAAGCACCAATTTTGAAACGCCAGCGTGAGGAGTATGAACGTGCACAGAAAGCTGTAGCAAGTTTATCAGTTAAGCTTGAACAAGCTATGAAGGAGATCCAGCGATTGCAGGAGGACACTGATAAAGCTCACAAACATTCATCTGTGCTTGAAAGAGACAATCAGAGGATGGAAATACAAATAAAAGATCTTTCACAGCAGATTAGAGTGCTTTTGATGGAACTTGAAGAGGCAAGAGGTAACCATGTAATTCGTGATGAGGAAGTAAGCTCTGCTGACATAAGTAGTTCATCTGAAGTAATATCACAGCATCTAGTATCCTATAGAAATATTGAAGAACTTCAGCAGCAAAATCAGCGCCTCTTAGTAGCTCTTAGAGAACTTGGGGAAACCCGAGAAAGAGAAGAACAAGAAACAACTTCATCTAAAATCACTGAGCTTCAACACAAACTTGAGAGTGCCCTCACTGAACTGGAACAACTCCGTGAGTCTCGACAACATCAGATGCAGCTTGTTGATTCCATAGTTCGACAACGTGATATGTACCGTATTTTATTGTCACAAACAACAGGAGTTGTTATTCCATTACAAGCTTCAAGCTTAGATGACATGTCTATTATGTCAACTCCAAAACGTTCAAGTACATCCCAGACTGTGTCCACTCCTGCTCCAGTACCGATGATTGAATCATCAGAAGCTATAGAGGCTAAGGCTGCCCTTAAACAGTTGCAGGAGATTTTTGAGAACTACAAAAAAGAAAAAGCAGATAATGAAAAAATACAAAATGAGCAACTTGAGAAACTTCAGGAACAAGTCACAGATTTACGGTCACAAAACACCAAGATTTCTACCCAGCTAGATTTTGCCTCTAAACGTTATGAAATGCTGCAGGATAATGTCGAAGGATATCGTCGAGAAATAACATCCTTACAAGAGAGAAATCAGAAGCTCACTGCAACAACTCAAAAGCAGGAACAGATCATTAATACAATGACTCAAGACTTGAGAGGAGCAAATGAAAAGCTAGCTGTTGCAGAAGTAAGAGCAGAAAATTTGAAGAAGGAAAAGGAAATGCTTAAATTGTCAGAGGTCCGTCTTTCTCAGCAAAGGGAATCTTTGTTAGCTGAACAAAGGGGACAAAACTTGCTGCTGACTAATCTGCAGACAATTCAGGGACTACTAGAGCGATCGGAAACAGAAACCAAACAAAGACTTAGTACCCAGATAGAAAAACTGGAGCATGAGATCTGTCATCTAAAGAAGAAGTTGGAAAATGAAGTGGAACAAAGGCATACACTTACTAGAAATCTAGATGTTCAACTTTTAGATACAAAGAGACAGCTGGATACAGAGACAAATCTTCATTTTAATACAAAAGAACTATTAAAAAATGCTCAAAAGGAAATTGCTACATTGAAACAGTATCTTAGTAATATGGAAGCCCAACTTGCTTCTCAGTCCTCACAGAGAACTGGTAAAGGTCAACCTAATGACAAAGAAGATGTGGATGATCTTCTGAGTCAGCTAAGGCAGGCTGAAGAACAAGTAAATGACTTGAAGGAGAGACTAAAAACAAGTGCTAGTAATGTGGAACAGTATCGAGCAATGGTGACTAGTTTAGAAGAATCCCTCAACAAGGAAAAACAGGTGACAGAAGAAGTACGGAAAAATATTGATGTTCGTTTAAAAGAATCAGCTGAATTTCAGATGCAGTTGGAAAAGAAGTTGATGGAAGTAGAGAAGGAGAAACAAGAACTTCAGGATGATAAGAGAAAAGCCATAGAGAGCATGGAACAACAGTTAACTGAGCTGAGGAAAACACTTTCAAGTGTTCAGAATGAAGTTCAAGAAGCTCTTCAGAGAGCAAGCACAGCTTTAAGTAATGAACAGCAAGCCAGACGTGACTGTCAGGAACAAGCTAAAATAGCTGTGGAAGCTCAGAATAAGTATGAGAGAGAATTGATGCTACATGCCGCTGATGTGGAAGCTCTACAAGCTGCCAAGGAACAGGTTTCAAAAATGGCATCAATCCGTCAGCACTTGGAGGAAGCAACCCAGAAGGCAGAATCACAGTTGTTGGAGTGTAAAGCATCTTGGGAAGAGAGAGAGAGAATGTTGAAGGATGAAGTTGCCAAGTGTGTATCTCGCTGTGAAGATCTAGAGAAACAAAACAGATTACTTCATGATCAAATTGAAAATTTAAGTAACAAAGTAGTTGCCTCTATGAAGGAAGGCGCACAAGGTACATTGAATGTATCTCTCAGTGAAGAAGGAAAATCTCAGGAACAAATTTTAGAAATTCTCAGATTTATACGACGAGAAAAAGAAATTGCTGAAACTAGGTTTGAGGTGGCTCAAGTTGAGAGTCTGCGTTATCAACAAAGGGTTGAACTTTTACAAAGACAGCTGCAGGAACTGCAGGATAGCCTAAATGCTGAAAGGGAAAAGGTCCAGGTAACTGCTAAAACAATGGCTCAGCATGAAGAACTGATGAAGAAAACTGAAACAATGAATGTAGTTATGGAGACCAATAAAATGCTACGAGAAGAAAAGGAGAGACTAGAACAGGATCTACAACAAATGCAAGCAAAGGTGAGGAAACTGGAGTTAGATATTTTACCTTTACAAGAAGCAAATGCTGAGCTGAGTGAGAAGAGTGGTATGTTGCAGGCAGAGAAGAAATTATTAGAAGAGGATGTCAAACGTTGGAAAGCACGTAACCAGCATCTAGTGAGTCAACAAAAAGATCCAGATACAGAAGAATATAGGAAACTCCTTTCTGAAAAGGAAGTTCACACTAAGCGGATTCAACAGTTGACTGAAGAACTTGGGAGACTTAAAGCTGAAATTGCAAGATCAAATGCATCTTTGACAAACAACCAAAATTTAATCCAGAGTCTGAAGGAAGATTTAAATAAAGTAAAAACTGAAAAGGAAGCCATCCAGAAGGATTTAGATGTCAAAATAATTGACATTCAAGAGAAAGTCAAAACTATTACTCAAGTCAAGAAAATTGGGCGCAGATACAAGACTCAGTATGAAGAACTGAAAGCACAACAGGATAAGGTCATGGAGACTTCAGCTCAGTCTTCTGGAGACCATCAGGAACAGCATGTCTCAGTACAGGAGATGCAAGAGCTCAAAGATACCCTCAACCAGGCTGAAACAAAGTCAAAATCACTCGAGAGTCAAGTGGAAAATTTGCAGAAGACATTATCTGAAAAAGAGACAGAAACAAGAAATCTACAGGAACAAACTATACAGCTTCAATCTGAACTTGCACGACTTCGTCAGGATCTTCAAGATCGAACCACTCAGGAGGAACAGCTAAGACAGCAGATTACTGAAAAGGAAGAGAAAACAAGAAAGGCTATTGTAGCAGCAAAATCAAAAATTGCACATCTAGCTGGTGTGAAAGATCAGCTTACTAAAGAGAATGAGGAGCTTAAACAAAGAAATGGAGCCTTAGATCAGCAGAAAGATGAACTAGATGTTCGTATGACGGCTCTTAAGTCCCAATATGAAGGTCGAATTAGTCGTTTGGAAAGAGAACTCAGGGAGCATCAGGAGAGGCACCTTGAGCAGAGAGATGAGCCTCAAGAACCTACTAATAAGGTTCCAGAACAACAGAGACAGATCACGTTGAAAACCACTCCAGCTTCTGGTGAAAGAGGAATTGCCAGCGCATCAGATCCACCAACAGCCAATATCAAGCCAACTCCTGTTGTTTCTACTCCAAGTAAAGTGACAGCTGCAGCTATGGCTGGGAATAAGTCAACACCCAGGGCTAGTATTCGCCCAATGGTTACACCCGCAACTGTGACAAATCCTACTACTACCCCAACAGCTACCGTGATGCCCACTACACAAGTGGAATCACAAGAGGCTATGCAGTCCGAAGGGCCTGTGGAACATGTTCCAGTTTTTGGAAGCACAAGTGGGTCTGTTCGTTCTACTAGCCCTAATGTCCAGCCTTCCATTTCTCAACCAATTTTAACTGTTCAACAACAAACACAGGCAACAGCATTTGTGCAGCCAACTCAACAGAGTCATCCTCAGATTGAGCCTGCAAATCAAGAGTTATCTCCGAATATAGTAGAGGTTGTTCAGAGTTCACCAGTTGAGCGGCCTTCAACTTCCACAGCAGTATTTGGCACTGTTTCAGCTACCCCAAGTTCCTCTTTGCCAAAGCGTTCACGAGAAGAGGAAGAAGATAGCACCGTAGAAGCATCAGACCAAGTCTCTGATGATACAGTGGAAATGCCTCTTCCAAAGAAGTTGAAAAGTGTTACACCTGTAGGAACCGAGGAAGAAGTTATGGCAGAAGAAAGTACTGATGGAGAAGTAGAGACTCAGGTGTACAATCAGGATTCTCAAGATTCCATTGGAGAAGGAGTCACTCAGGGTGAGTACACACCCATGGAAGATAGTGAAGAAACTTCTCAGTCTCTACAAATAGATCTTGGACCACTTCAATCAGATCAGCAAACCACAACTTCATCCCAGGATGGTCAAGGCAAAGGAGATGATGTTATTGTGATTGACAGTGATGATGAAGAGGAGGATGATGATGAAAATGATGGAGAACATGAGGATTATGAAGAAGATGAAGATGATGATGATGATGATGAAGATGACACAGGGATGGGAGATGAAGGTGAAGATAGTAATGAAGGAACTGGTAGTGCAGACGGCAATGATGGATATGAAGCTGACGATGCCGAGGGTGGTGATGGAACTGACCCTGGCACTGAAACAGAGGAAAGTATGGGTGGAGGTGAAAGTAATCAGAGAGCTGCTGATTCTCAAAACAGTGGAGAGGGAAATACAGGTGCTGCAGAGTCGTCCTTTTCCCAGGAGATTTCTAGAGAACACCAGCCATCATCAGCATCTGAAAGGCAGACCCCTCGAGCACCTCAGTCCCCTAGACGCCCACCACATCCGCTTCCCCCACGCCTGACCATTCATGCTCCACCTCAAGAATTGGGGCCACCAGTGCAGAGAATTCAGATGACTCGGAGGCAGTCTGTAGGACGTGGGCTTCAGTTGACTCCAGGAATAGGTGGCATGCAGCATTTTTTTGATGATGAAGACAGAACAGTTCCAAGTACCCCAACTCTTGTGGTGCCACATCGTACTGATGGATTTGCTGAAGCTATTCATTCCCCACAGGTTGCTGGTGTTCCTAGATTCCGATTTGGGCCACCTGAGGATATGCCACAAACAAGTTCCAGTCACTCCGATCTTGGCCAGCTTGCTTCGCAAGGAGGTTTAGGAATGTATGAAACACCTCTCTTCCTAGCTCATGAGGAAGAGTCTGGTGGCCGAAGTGTTCCTACTACTCCTCTACAAGTAGCAGCCCCAGTGACTGTATTTACGGAGAGTACCACCTCCGATGCTTCAGAGCATGCTTCTCAGTCTGTTCCAATGGTGACAACCTCCACTGGTACTTTGTCCACGACAAATGAAACAGCAACAGGAGATGATGGAGATGAAGTATTTGTGGAAGCAGAATCTGAAGGTATTAGTTCAGAAGCGGGCCTAGAAATTGATAGCCAGCAGGAAGAAGAGCCTGTTCAGGCATCTGATGAGTCGGATCTCCCTTCTACCAGCCAGGATCCTCCTTCCAGCTCTTCTGTAGATACTAGCAGTAGTCAGCCAAAGCCTTTTAGACGTGTAAGACTTCAGACAGCACTGAGACAAGGTGTCCGTAGTCGTCAGTTTAACAGACAAAGAGGTGTAAGCCATGCAGTGGGAGGAAGAGGAGGGATAAATAGAGGAAATATTAATTAA

Related Sequences

XP_004862843.1 Protein

Tpr PREDICTED: nucleoprotein TPR isoform X2 [Heterocephalus glaber]

Length: 2362 aa      View alignments
>XP_004862843.1
MAAVLQQVLERTELSKLPKSVQNKLEKFLADQQSEIDGLKGRHEKFKVESEQQYFEIEKRLSHSQERLVNETRECQSLRLELEKLNNQLKALTEKNKELEIAQDRSITIQSQFTRTKEELEAEKRDLIRTNERLSQELEYLTEDVKRLNEKLKESSATKSELQLKLDELQASDVSIKYREKRLEQEKELLHSQNTWLNTELKTKTDELLALGREKGNEILELKCNLENKKEEVSRLEEQMNGLKTSNEHLQKHVEDLLTKLKEAKEQQASMEEKFHNELNAHIKLSNLYKSAADDSEAKSNELTGAVDELHKLLKDAGEANKAIQDHLLEVEKSKDQMEKEMLEKIGKLEKELENANDLLSATKRKGAILSEEELAALSPTAAAVAKIVKPGMKLTELYNAYVETQDQLLLEKLENKRINKYLDEIVKEVEAKAPILKRQREEYERAQKAVASLSVKLEQAMKEIQRLQEDTDKAHKHSSVLERDNQRMEIQIKDLSQQIRVLLMELEEARGNHVIRDEEVSSADISSSSEVISQHLVSYRNIEELQQQNQRLLVALRELGETREREEQETTSSKITELQHKLESALTELEQLRESRQHQMQLVDSIVRQRDMYRILLSQTTGVVIPLQASSLDDMSIMSTPKRSSTSQTVSTPAPVPMIESSEAIEAKAALKQLQEIFENYKKEKADNEKIQNEQLEKLQEQVTDLRSQNTKISTQLDFASKRYEMLQDNVEGYRREITSLQERNQKLTATTQKQEQIINTMTQDLRGANEKLAVAEVRAENLKKEKEMLKLSEVRLSQQRESLLAEQRGQNLLLTNLQTIQGLLERSETETKQRLSTQIEKLEHEICHLKKKLENEVEQRHTLTRNLDVQLLDTKRQLDTETNLHFNTKELLKNAQKEIATLKQYLSNMEAQLASQSSQRTGKGQPNDKEDVDDLLSQLRQAEEQVNDLKERLKTSASNVEQYRAMVTSLEESLNKEKQVTEEVRKNIDVRLKESAEFQMQLEKKLMEVEKEKQELQDDKRKAIESMEQQLTELRKTLSSVQNEVQEALQRASTALSNEQQARRDCQEQAKIAVEAQNKYERELMLHAADVEALQAAKEQVSKMASIRQHLEEATQKAESQLLECKASWEERERMLKDEVAKCVSRCEDLEKQNRLLHDQIENLSNKVVASMKEGAQGTLNVSLSEEGKSQEQILEILRFIRREKEIAETRFEVAQVESLRYQQRVELLQRQLQELQDSLNAEREKVQVTAKTMAQHEELMKKTETMNVVMETNKMLREEKERLEQDLQQMQAKVRKLELDILPLQEANAELSEKSGMLQAEKKLLEEDVKRWKARNQHLVSQQKDPDTEEYRKLLSEKEVHTKRIQQLTEELGRLKAEIARSNASLTNNQNLIQSLKEDLNKVKTEKEAIQKDLDVKIIDIQEKVKTITQVKKIGRRYKTQYEELKAQQDKVMETSAQSSGDHQEQHVSVQEMQELKDTLNQAETKSKSLESQVENLQKTLSEKETETRNLQEQTIQLQSELARLRQDLQDRTTQEEQLRQQITEKEEKTRKAIVAAKSKIAHLAGVKDQLTKENEELKQRNGALDQQKDELDVRMTALKSQYEGRISRLERELREHQERHLEQRDEPQEPTNKVPEQQRQITLKTTPASGERGIASASDPPTANIKPTPVVSTPSKVTAAAMAGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVESQEAMQSEGPVEHVPVFGSTSGSVRSTSPNVQPSISQPILTVQQQTQATAFVQPTQQSHPQIEPANQELSPNIVEVVQSSPVERPSTSTAVFGTVSATPSSSLPKRSREEEEDSTVEASDQVSDDTVEMPLPKKLKSVTPVGTEEEVMAEESTDGEVETQVYNQDSQDSIGEGVTQGEYTPMEDSEETSQSLQIDLGPLQSDQQTTTSSQDGQGKGDDVIVIDSDDEEEDDDENDGEHEDYEEDEDDDDDDEDDTGMGDEGEDSNEGTGSADGNDGYEADDAEGGDGTDPGTETEESMGGGESNQRAADSQNSGEGNTGAAESSFSQEISREHQPSSASERQTPRAPQSPRRPPHPLPPRLTIHAPPQELGPPVQRIQMTRRQSVGRGLQLTPGIGGMQHFFDDEDRTVPSTPTLVVPHRTDGFAEAIHSPQVAGVPRFRFGPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEEESGGRSVPTTPLQVAAPVTVFTESTTSDASEHASQSVPMVTTSTGTLSTTNETATGDDGDEVFVEAESEGISSEAGLEIDSQQEEEPVQASDESDLPSTSQDPPSSSSVDTSSSQPKPFRRVRLQTALRQGVRSRQFNRQRGVSHAVGGRGGINRGNIN