Details from NCBI annotation

Gene Symbol Pnn
Gene Name pinin, desmosome associated protein, transcript variant X2
Entrez Gene ID 101716915

Database interlinks

Part of NW_004624813.1 (Scaffold)

For more information consult the page for NW_004624813.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PNN ENSCPOG00000004107 (Guinea pig)

Gene Details

pinin, desmosome associated protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003706, Guinea pig)

Protein Percentage 95.87%
CDS Percentage 95.1%
Ka/Ks Ratio 0.13182 (Ka = 0.0204, Ks = 0.1549)

PNN ENSG00000100941 (Human)

Gene Details

pinin, desmosome associated protein

External Links

Gene Match (Ensembl Protein ID: ENSP00000216832, Human)

Protein Percentage 94.42%
CDS Percentage 93.44%
Ka/Ks Ratio 0.13516 (Ka = 0.0288, Ks = 0.2132)

Pnn ENSMUSG00000020994 (Mouse)

Gene Details

pinin

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000021381, Mouse)

Protein Percentage 92.89%
CDS Percentage 90.79%
Ka/Ks Ratio 0.10272 (Ka = 0.035, Ks = 0.3409)

Pnn ENSRNOG00000004061 (Rat)

Gene Details

pinin, desmosome associated protein (Pnn), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000005439, Rat)

Protein Percentage 92.6%
CDS Percentage 91.11%
Ka/Ks Ratio 0.11719 (Ka = 0.0371, Ks = 0.3168)

Genome Location

Sequence Coding sequence

Length: 2154 bp    Location: 8620084..8627140   Strand: +
>XM_004862753.1
ATGGCGGTCGCAGTGAGAACTTTGCAGGAGCAGTTAGAAAAGGCCAAAGAAAGCCTAAAAAACGTGGATGAGAATATTCGCAAGCTCACCGGGCGAGATCCGAATGACGTGAGGCCCATCCAAGCCAGATTGCTGGCCCTTTCTGGTCCTGGTGGAGGTAGAGGACGTGGTAGTTTATTGCTGAGGCGTGGATTCTCAGATAGTGGAGGAGGACCCCCAGCCAAACAGAGAGACCTTGAAGGGGCAGTCAGTAGGCTGGGCGGAGAGCGTCGGACAAGAAGAGAATCACGCCAAGAAAGTGACCCAGAGGATGATGATGTTAAAAAGCCAGCGTTGCAGTCTTCAGTTGTAGCTACCTCCAAAGAGCGCACACGTAGAGACCTTATCCAGGATCAAAATATGGATGAAAAGGGAAAGCAAAGGAACCGGCGAATATTTGGCTTGTTGATGGGTACTCTTCAAAAATTTAAACAAGAATCCACTGTTGCTACTGAAAGGCAAAAGCGGCGCCAGGAAATTGAACAAAAACTTGAAGTTCAGGCAGAAGAAGAGAGAAAGCAGGTTGAAAATGAGAGGAGAGAACTATTTGAAGAGAGGCGCGCTAAACAGACAGAACTGCGGCTTTTGGAGCAGAAGGTTGAGCTTGCACAGCTGCAAGAAGAGTGGAATGAGCATAATGCCAAGATAATTAAATATATAAGAACTAAGACAAAGCCCCATTTGTTCTATATTCCTGGAAGAATGTGTCCAGCTACCCAAAAACTAATAGAAGAGTCACAGAGAAAAATGAATGCTTTATTTGAAGGTAGACGCATCGAATTTGCAGAACAAATAAATAAAATGGAGGCTAGGCCTAGAAGACAATCAATGAAGGAAAGAGAGCATCAGGTGGTGCGTAACGAAGAACAGAAGGCGGAACAAGAAGAGGGTAAGGTGGCTCAGCGAGAGGAAGAGTTGGAGGAGACAGGTAATCAGCACAATGATGTAGAAATAGAGGAAGCAGGAGAGGAAGAGGAAAAGGAAGTAGGTATAGTTCATAGTGATGGAGAGAAAGAACAGGAAGAGGAGGAACAAAAACAGGAAATGGAGGTTAAGATGGAGGAGGAAACTGAGGTAAGAGAGAGTGAGAAGCAGCAAGATAGTCAGGCTGAAGAAATTATGGATGTGCTAGAGATGGTTGAGAATGTCAAAAATGTAATTGCAGAGCAGGAGGTAATGGAAACTAATCAAGTTGAAAGTATGGAGCCTTCAGAAAATGAAACTAGCAAAGAATTGGAGCCAGAGATGGAATTTGAAGTTGAGCCAGATAAAGAATGTAAATCTGTTTCTCCTGGAAAAGAGAATGTTAGTGCTCTCGAAGTAGAAAAGGATTCTGAGGAAAAAGAAGGAAAAGAACCTGAGCCTCAACTTGAGCCTGTGCCCCAGCCCCAGCCCCAGCTCCAGCCCCAGCTCCAGCTCCAGCTGCAGTCCCAGCCAGTACTCCAGCCCCAGCCTATCTCTCAGCCTGAGACTTTGCCATTAGCTGCTTTACAGCCATCATCTCAGGTTTTTCAGGATCAAGGAAACTTAATACCAGAGCGGAAGGAGTTTCCTCTAGAATCTGTGAAACTCACGGAGGTGCCAGTAGAGCCAGTCTTGACCATACTTGTAGAAAGTAAAAGCAAAACCAAAACTAGGAGCAGAAGTAGAGGTCGTGCTAGAAATAAAACAAGCAAGAGTAGAAGTCGGAGCAGTAGCAGCAGTAGTTCTAGTAGCAGTTCAACTAGTAGCAGCAGTGGAAGCAGTTCCAGTAGTGGCAGTAGTAGTAGTCGAAGCAGTTCCAGCAGTAGCTCTAGTACCAGTGGTAGCAGCAGCAGAGACAGTAGCAGCAGCACTAGTAGTAGTAGTGAGAGTAGAAGTCGGAGTAGAGGCCGGGGACATAATAGAGATAGAAAGCACAGAAGGAGCGTGGATCGGAAGCGAAGGGATACTTCAGGACTAGAAAGAAGTCACAAATCTTCAAAAGGTGGTAGTAGTAGAGATGCAAAAGGATCAAAGGATAAGAATTCTCGGTCCGACAGGAAGAGGTCTATATCAGAGAGTAGTCGATCAGGCAAAAGATCTTCAAGAAGTGAAAGAGACCGAAAATCAGACAGGAAAGACAAAAGGCGTTAA

Related Sequences

XP_004862810.1 Protein

Pnn PREDICTED: pinin isoform X2 [Heterocephalus glaber]

Length: 717 aa      View alignments
>XP_004862810.1
MAVAVRTLQEQLEKAKESLKNVDENIRKLTGRDPNDVRPIQARLLALSGPGGGRGRGSLLLRRGFSDSGGGPPAKQRDLEGAVSRLGGERRTRRESRQESDPEDDDVKKPALQSSVVATSKERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQAEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPHLFYIPGRMCPATQKLIEESQRKMNALFEGRRIEFAEQINKMEARPRRQSMKEREHQVVRNEEQKAEQEEGKVAQREEELEETGNQHNDVEIEEAGEEEEKEVGIVHSDGEKEQEEEEQKQEMEVKMEEETEVRESEKQQDSQAEEIMDVLEMVENVKNVIAEQEVMETNQVESMEPSENETSKELEPEMEFEVEPDKECKSVSPGKENVSALEVEKDSEEKEGKEPEPQLEPVPQPQPQLQPQLQLQLQSQPVLQPQPISQPETLPLAALQPSSQVFQDQGNLIPERKEFPLESVKLTEVPVEPVLTILVESKSKTKTRSRSRGRARNKTSKSRSRSSSSSSSSSSSTSSSSGSSSSSGSSSSRSSSSSSSSTSGSSSRDSSSSTSSSSESRSRSRGRGHNRDRKHRRSVDRKRRDTSGLERSHKSSKGGSSRDAKGSKDKNSRSDRKRSISESSRSGKRSSRSERDRKSDRKDKRR