Details from NCBI annotation

Gene Symbol Trappc6b
Gene Name trafficking protein particle complex 6B, transcript variant X1
Entrez Gene ID 101716339

Database interlinks

Part of NW_004624813.1 (Scaffold)

For more information consult the page for NW_004624813.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TRAPPC6B ENSCPOG00000008892 (Guinea pig)

Gene Details

trafficking protein particle complex 6B

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007987, Guinea pig)

Protein Percentage 99.37%
CDS Percentage 96.84%
Ka/Ks Ratio 0.01443 (Ka = 0.0026, Ks = 0.1798)

TRAPPC6B ENSG00000182400 (Human)

Gene Details

trafficking protein particle complex 6B

External Links

Gene Match (Ensembl Protein ID: ENSP00000330289, Human)

Protein Percentage 99.37%
CDS Percentage 96.41%
Ka/Ks Ratio 0.01863 (Ka = 0.0028, Ks = 0.1521)

Trappc6b ENSMUSG00000020993 (Mouse)

Gene Details

trafficking protein particle complex 6B

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000021380, Mouse)

Protein Percentage 96.84%
CDS Percentage 92.19%
Ka/Ks Ratio 0.04238 (Ka = 0.0144, Ks = 0.3397)

Trappc6b ENSRNOG00000004103 (Rat)

Gene Details

trafficking protein particle complex 6B (Trappc6b), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000005568, Rat)

Protein Percentage 98.1%
CDS Percentage 93.46%
Ka/Ks Ratio 0.02738 (Ka = 0.0084, Ks = 0.3063)

Genome Location

Sequence Coding sequence

Length: 477 bp    Location: 8615756..8600455   Strand: -
>XM_004862750.1
ATGGCGGACGAGGCGTTGTTTTTGCTGCTCCATAACGAGATGGTGGCCGGAGTGTACAAATCCGCGGAGCAGGGGGAGGTGGAAAATGGGCGATGTATTACTAAGCTGGAAAACATGGGGTTTCGAGTGGGACAAGGATTGATAGAAAGGTTTACAAAAGATACTGCAAGGTTCAAGGATGAGTTAGACATCATGAAGTTCATTTGTAAAGATTTTTGGACTACAGTATTCAAGAAACAAATCGACAATCTAAGGACAAATCATCAGGGCATCTATGTACTTCAGGACAACAAATTTCGTCTGCTTACTCAGATGTCTGCAGGAAAACAGTATTTAGAACATGCATCTAAGTATCTAGCCTTTACATGTGGCTTAATCAGAGGTGGTTTATCAAACTTGGGGATAAAAAGTATTGTAACTGCCGAAGTGTCTTCAATGCCTGCTTGCAAATTTCAGGTGATGATACAGAAGCTGTAA

Related Sequences

XP_004862807.1 Protein

Trappc6b PREDICTED: trafficking protein particle complex subunit 6B isoform X1 [Heterocephalus glaber]

Length: 158 aa      View alignments
>XP_004862807.1
MADEALFLLLHNEMVAGVYKSAEQGEVENGRCITKLENMGFRVGQGLIERFTKDTARFKDELDIMKFICKDFWTTVFKKQIDNLRTNHQGIYVLQDNKFRLLTQMSAGKQYLEHASKYLAFTCGLIRGGLSNLGIKSIVTAEVSSMPACKFQVMIQKL