| Gene Symbol | Col28a1 |
|---|---|
| Gene Name | collagen, type XXVIII, alpha 1 |
| Entrez Gene ID | 101705361 |
For more information consult the page for NW_004624813.1 (Scaffold)
The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.
| Protein Percentage | 89.32% |
|---|---|
| CDS Percentage | 91.3% |
| Ka/Ks Ratio | 0.25514 (Ka = 0.054, Ks = 0.2116) |
collagen, type XXVIII, alpha 1
| Protein Percentage | 87.64% |
|---|---|
| CDS Percentage | 88.36% |
| Ka/Ks Ratio | 0.21166 (Ka = 0.068, Ks = 0.3212) |
collagen, type XXVIII, alpha 1
| Protein Percentage | 83.87% |
|---|---|
| CDS Percentage | 85.04% |
| Ka/Ks Ratio | 0.21597 (Ka = 0.0931, Ks = 0.4311) |
| Protein Percentage | 83.07% |
|---|---|
| CDS Percentage | 84.97% |
| Ka/Ks Ratio | 0.23082 (Ka = 0.0971, Ks = 0.4205) |
>XM_004862731.1 ATGATGTGGAATAGATATTTTACTTCCTGTCTCCTGCTTTTGCTGCCTTTTATGAGCCAAATAGTATATGGACAAAGAAGGAAAGGGTCAAAGCCAAAGTTACTCGCAAGGAAAAATGACCTCCAGGACTCCATTTGCTTCATAGACATTGTCTTCATTGTGGACAGCTCTGAAAGTTCTAAAATTCTCCTGTATGATAAGCAGAAAGACTTCGTGAATCGTTTGAGTGACAAAATTTTCCAGTTGACCCCTGGTCACTCCTTGAAATATGACATCAAATTGGCTGCCCTTCAGTTTAGCAGCTCTGTCCAGATTGATCCACCGTTTTCTTCTTGGAAAGATCTGCAGACATTTAAGGAGAGGGCCAAGTCTATGAATTTAATTGGGCAAGGTACCTTCTCTTATTATGCCATCTCTAATGCCACAAGGCTACTTAAGAGGGAAGGGCGTAAAGATGGTGTGAAAGTGGCTTTGCTGATGACAGATGGCATTGATCACCCAAAGAATCCAGATGTTCAAAGTATTTCTGAAGATGCTAGAATTTCTGGAATATCATTCATCACCATCGGACTTTCCACTGTAGTCCATGAAGCTAAACTTCGTTTGATATCTGGGGATTCACATAGTGAACCCATCCTACTGCTGAGTGATCCAACCGTTGTAGATAAAATTCGGGATCGCCTGGATATCTTGTTTGAAAAGAAGTGTGAACACAAGATTTGTGAATGTGAGAAGGGGGATCCAGGTGATCCAGGGCCTCCTGGTACACATGGAAACCCAGGTATCAAAGGTGAACGAGGACCAAAAGGAAACCCGGGTGATGCTCAAAAAGGAGAATCTGGAGAGAGAGGTCCTGGGGGAATTCCTGGATACAAGGGTGACAAGGGCGAACAAGGAGAATGTGGTAAACCAGGAATAAAAGGTGACAAAGGAGCTACAGGGCCATCTGGACCAAAGGGACCCAGAGGACTTCAGGGCATTAGTGGACCTCCAGGGGATACAGGCCCAAAGGGATTTCAAGGCAATAAGGGTGAGCCAGGTCCTCCCGGTCCTTATGGTCCTCCTGGAGCCCCTGGTATTGGACAGCAAGGTATTAAGGGAGAAAGAGGCCAAGAAGGAAGGACAGGAGCTCCAGGACCAATTGGAGTTGGTGAGCCAGGACAGCCAGGTCCCCGAGGTCCTGAGGGACCACCAGGAGAGAGGGGCTTACCTGGAGAAGGTGTACCAGGACCAAAGGGTGAAAAAGGTTCTGAAGGACCAATTGGTCCTCAAGGACTACAAGGCCTATCAATCAAAGGGGACAAGGGGGATTTGGGACCTGTGGGACCCCAAGGGCCAATAGGCATCCCAGGCATTGGTAGTCAAGGGGAACAGGGAATCCAAGGTCCTATTGGTCCACCTGGTCCACAAGGGCCTCCAGGACAAGGTTTACCTGGTTCCAAGGGAGAAGTGGGTCAGATGGGACCTACAGGCCCTAGAGGACTGGTGGGAATTGGCGTACAGGGTCCAAAGGGGGCGCCAGGTTCAACAGGTCTCCCAGGACAACCTGGATTACCAGGAGAAGATGGAGCCGCAGGGAAGAAGGGAGAAGCGGGGCTTCCAGGAACAAGAGGCCCAGAGGGACCACCTGGGAAAGGACAGCCTGGGCCCAAGGGTGATGAAGGAAAGAAAGGAAGCAAAGGAAATCAAGGACAGAGGGGATTTCCAGGGCCTGAAGGGCCAAAGGGAGAGCCGGGCATTATGGGCCCCTTTGGAATGCCTGGAGCAGCAATTCCTGGACCACCTGGACCAAAGGGAGACAGAGGAGGACCTGGGATCCCTGGTTTTAAAGGAGAGCCTGGGCTTTCTATTCGAGGACTAAAGGGTGCCCAAGGCCCTCAGGGACCAGTGGGTACTCCAGGACTCAAGGGCGATGGCTATCCTGGTGTGGCTGGACCTCGAGGATTACCAGGACCCCCGGGACCCATGGGTTTACATGGAGTTGGAGACACTGGAGCAAAGGGAGAGCCTGGCGCCAGAGGCCCTCCAGGTCCCTCTGGGCCTTGGGGCATAGGAACTCAAGGGCCAAAGGGTGATATTGGGCAGAAAGGCTTGCCTGGCCTTCCTGGGCCACCAGGCTATGGGTCCCAAGGAATTAAAGGAGAACAAGGACCTCAAGGTTTTCCAGGGCCAAAAGGCAACATGGGCCATGGACTCCCAGGCCAAAAGGGAGAGCATGGAGAACGAGGTGATGTGGGAAAGAAAGGTGAAAAGGGGGAAATTGGAGAGTCTGGATCCCCAGGAAAACAGGGTTTACAAGGACCAAAAGGAGACCTGGGTCTTACAAAAGAAGAAATTATCAAACTTATTTTTGAAATATGTGGTTGTGGGCCCAAATGCAAAGCGATTCCACTGGAGTTGGTGTTTGTGATTGACAGTTCAGAAAGTGTGGGGCCAGAGAACTTCCAGATCATCCAAAATTTTGTGAAGACTCTGGCTGACCGGGTCACTCTGGACCTTGTCACAGCCCGCATAGGCATAATCAATTACAGCCATAAGGTGGAGATGGTTGCTAATTTGAAACAGTTCTCCAGCAAGGATGACTTCAAGCTGGCCGTGGACCACATGCAGTATCTGGGGGAAGGCACCTACACAGCCACTGCTCTTCAAGCAGCCAATGACATGTTCAGGGATGCAAGGCCAGGAGTAAAGAAGGTGGCCTTGGTCATCACCGATGGACAGACAGATTCTCGAGATAAAAAGAAACTAACTGAAGTGGTGAAAGATGCCAATGATGCTAACGTGGAGAGATTTGTGATTGGGGTGGTGAAGAAAAATGACCCTAATTTTGAAATATTCCACCAAGAAATGAGTGTAATTGCTACTGACGCAGAGCATGTGTATCAATTTGATGACTTCTTTACCCTGCAAGACACTCTGAAACAAAAGTTGTCTAAAACAATTTGTGAGGATTTTGATTCCTATCTTGTTCAAGTTTTTGGTACAGCATCGCTTCGACCTGGGTTTGGGATGTTGGGGGAAGAACTCAATGAATCCACTCCAGAGCCTCCACAAGAAGTTTCTGAACCATTCATTGTCCTTGCAGGCCAGGCTGAAGAAAATGAGGCTCCAGAGCCTACTTGGGCTGATGGCTTGGCCACCACTGCCTCCTCCAAGGTTGCCACCACTCTTCAGCCATCTCATAGCACCTCTAGTGACATGAAAACTGGAACTCCCAATCCCATTTGGACACCAGACATGGAAAATTTGTTGTACAAAGATCAGAGATGTTTGGAACCCTTGAAGCCTGGGAACTGTGGTGACTATGTGGTTCGATGGTATTATGACAAGCAGGTCAACTCCTGTGCCCGCTTTTGGTTCAGTGGCTGTAATGGCTCAGGAAATCGATTCAACAGTGAAAAGGAATGTGAAGATGTCTGCATGAAAGAGTGA
Col28a1 PREDICTED: collagen alpha-1(XXVIII) chain [Heterocephalus glaber]
Length: 1143 aa View alignments>XP_004862788.1 MMWNRYFTSCLLLLLPFMSQIVYGQRRKGSKPKLLARKNDLQDSICFIDIVFIVDSSESSKILLYDKQKDFVNRLSDKIFQLTPGHSLKYDIKLAALQFSSSVQIDPPFSSWKDLQTFKERAKSMNLIGQGTFSYYAISNATRLLKREGRKDGVKVALLMTDGIDHPKNPDVQSISEDARISGISFITIGLSTVVHEAKLRLISGDSHSEPILLLSDPTVVDKIRDRLDILFEKKCEHKICECEKGDPGDPGPPGTHGNPGIKGERGPKGNPGDAQKGESGERGPGGIPGYKGDKGEQGECGKPGIKGDKGATGPSGPKGPRGLQGISGPPGDTGPKGFQGNKGEPGPPGPYGPPGAPGIGQQGIKGERGQEGRTGAPGPIGVGEPGQPGPRGPEGPPGERGLPGEGVPGPKGEKGSEGPIGPQGLQGLSIKGDKGDLGPVGPQGPIGIPGIGSQGEQGIQGPIGPPGPQGPPGQGLPGSKGEVGQMGPTGPRGLVGIGVQGPKGAPGSTGLPGQPGLPGEDGAAGKKGEAGLPGTRGPEGPPGKGQPGPKGDEGKKGSKGNQGQRGFPGPEGPKGEPGIMGPFGMPGAAIPGPPGPKGDRGGPGIPGFKGEPGLSIRGLKGAQGPQGPVGTPGLKGDGYPGVAGPRGLPGPPGPMGLHGVGDTGAKGEPGARGPPGPSGPWGIGTQGPKGDIGQKGLPGLPGPPGYGSQGIKGEQGPQGFPGPKGNMGHGLPGQKGEHGERGDVGKKGEKGEIGESGSPGKQGLQGPKGDLGLTKEEIIKLIFEICGCGPKCKAIPLELVFVIDSSESVGPENFQIIQNFVKTLADRVTLDLVTARIGIINYSHKVEMVANLKQFSSKDDFKLAVDHMQYLGEGTYTATALQAANDMFRDARPGVKKVALVITDGQTDSRDKKKLTEVVKDANDANVERFVIGVVKKNDPNFEIFHQEMSVIATDAEHVYQFDDFFTLQDTLKQKLSKTICEDFDSYLVQVFGTASLRPGFGMLGEELNESTPEPPQEVSEPFIVLAGQAEENEAPEPTWADGLATTASSKVATTLQPSHSTSSDMKTGTPNPIWTPDMENLLYKDQRCLEPLKPGNCGDYVVRWYYDKQVNSCARFWFSGCNGSGNRFNSEKECEDVCMKE