Details from NCBI annotation

Gene Symbol C1galt1
Gene Name core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1
Entrez Gene ID 101704643

Database interlinks

Part of NW_004624813.1 (Scaffold)

For more information consult the page for NW_004624813.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

C1GALT1 ENSCPOG00000001617 (Guinea pig)

Gene Details

core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001459, Guinea pig)

Protein Percentage 93.57%
CDS Percentage 94.93%
Ka/Ks Ratio 0.18408 (Ka = 0.0285, Ks = 0.1546)

C1GALT1 ENSG00000106392 (Human)

Gene Details

core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000389176, Human)

Protein Percentage 92.98%
CDS Percentage 92.88%
Ka/Ks Ratio 0.1355 (Ka = 0.0341, Ks = 0.2517)

C1galt1 ENSMUSG00000042460 (Mouse)

Gene Details

core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000047931, Mouse)

Protein Percentage 89.18%
CDS Percentage 88.99%
Ka/Ks Ratio 0.1101 (Ka = 0.051, Ks = 0.4632)

C1galt1 ENSRNOG00000007804 (Rat)

Gene Details

core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1 (C1galt1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000010375, Rat)

Protein Percentage 90.35%
CDS Percentage 89.38%
Ka/Ks Ratio 0.10618 (Ka = 0.0465, Ks = 0.4381)

Genome Location

Sequence Coding sequence

Length: 1050 bp    Location: 4795549..4832049   Strand: +
>XM_004862730.1
ATGTCAGAAATACACTTTCAGGAAATGGCCTCTAAATCTTGGCTGAATATTTTAACCTTCCTCTGTGGATCAGCAATAGGATTTTTTTTTTGTTCTCAGCTATTTAGTATTTTGTTGGGAGAACAAGGTGACACCCAGCCTAATATTCTTCATAATGATCCTCATGCAAGACATTCAGATGATAATGGACAGAATCATCCAGAAGGACAAATGAACTTCAATGCAGATTCTAGCCAACATAAAGATGAGAACACAGACATCGCTGAAAACCTGTACCAGAAAGTTAAAATTCTTTGTTGGGTTATGACGGGCCCTCAAAATCTAGAGAAAAAGGCCAAACATGTCAAAGCTACATGGGCCCAACGTTGTAATAAAGTGTTATTTATGAGTTCAGAAGAAAATAAAGACTTCCCTACTGTGGGCTTAAAAACCAAAGAAGGTAGAGATCAACTATACTGGAAAACAATTAAAGCTTTTCAGTATGTTCATGACCATTATTTAGAAGATGCGGATTGGTTTATGAAAGCAGATGATGATACATATGTCATACTAGACAATTTGAGATGGCTTCTTTCAAAATATAGCCCTGAAAAACCCATTTATTTTGGGAGAAGATTTAAGCCCTTTGTAAAGCAGGGTTACATGAGTGGAGGAGCAGGATATGTACTAAGCAAAGAAGCCTTGAAGAGATTTATTGATGCGTTTAAAACAGAAAAATGTACACATAGTTCTTCCATTGAAGACCTAGCACTGGGAAAATGCATGGAAGTTATGAATGTAGAAGCTGGGGATTCCAGAGATACCACAGGAAAAGAAACTTTTCATCCCTTTGTACCAGAACACCACTTAATCAAAAGTTATCTACCCAGAACCTTTTGGTACTGGAATTATAACTATTATCCTCCTGTACAGGGCCCTGGTTGCTGTTCTGATCTTGCAGTTTCTTTTCACTATGTTGATTCTACAACCATGTATGAATTAGAATACCTCGTTTATCATCTTCGTGCATATGGTTATTTGTATAGATATCAACCTGCCTTACCTGAAAAC

Related Sequences

XP_004862787.1 Protein

C1galt1 PREDICTED: glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like, partial [Heterocephalus glaber]

Length: 350 aa      View alignments
>XP_004862787.1
MSEIHFQEMASKSWLNILTFLCGSAIGFFFCSQLFSILLGEQGDTQPNILHNDPHARHSDDNGQNHPEGQMNFNADSSQHKDENTDIAENLYQKVKILCWVMTGPQNLEKKAKHVKATWAQRCNKVLFMSSEENKDFPTVGLKTKEGRDQLYWKTIKAFQYVHDHYLEDADWFMKADDDTYVILDNLRWLLSKYSPEKPIYFGRRFKPFVKQGYMSGGAGYVLSKEALKRFIDAFKTEKCTHSSSIEDLALGKCMEVMNVEAGDSRDTTGKETFHPFVPEHHLIKSYLPRTFWYWNYNYYPPVQGPGCCSDLAVSFHYVDSTTMYELEYLVYHLRAYGYLYRYQPALPEN